Bandyopadhyay, Sourav

Global Analysis of Host-Pathogen Interactions that Regulate Early-Stage HIV-1 Replication

König, R., Zhou, Y., Elleder, D., Diamond, T. L., Bonamy, G. M. C., Irelan, J. T., Chiang, C.-Y., Tu, B. P., De Jesus, P. D., Lilley, C. E., et al. (2008) · Cell

HIV Research and TreatmentHIV/AIDS drug development and treatment

Cited by 960

Rewiring of Genetic Networks in Response to DNA Damage

Bandyopadhyay, S., Mehta, M., Kuo, D., Sung, M.-K., Chuang, R., Jaehnig, E. J., Bodenmiller, B., Licon, K., Copeland, W., Shales, M., et al. (2010) · Science

Fungal and yeast genetics researchDNA Repair Mechanisms

Cited by 447

Conservation and Rewiring of Functional Modules Revealed by an Epistasis Map in Fission Yeast

Roguev, A., Bandyopadhyay, S., Zofall, M., Zhang, K., Fischer, T., Collins, S. R., Qu, H., Shales, M., Park, H.-O., Hayles, J., et al. (2008) · Science

Bioinformatics and Genomic NetworksFungal and yeast genetics research

Cited by 352

Aurora kinase A drives the evolution of resistance to third-generation EGFR inhibitors in lung cancer

Shah, K. N., Bhatt, R., Rotow, J., Rohrberg, J., Olivas, V., Wang, V. E., Hemmati, G., Martins, M. M., Maynard, A., Kuhn, J., et al. (2019) · Nature Medicine

Lung Cancer Treatments and MutationsHER2/EGFR in Cancer Research

Cited by 286

An expanded universe of cancer targets

Hahn, W. C., Bader, J. S., Braun, T. P., Califano, A., Clemons, P. A., Druker, B. J., Ewald, A. J., Fu, H., Jagu, S., Kemp, C. J., et al. (2021) · Cell

Cancer Genomics and DiagnosticsChromatin Remodeling and Cancer

Cited by 213

Integrating physical and genetic maps: from genomes to interaction networks

Beyer, A., Bandyopadhyay, S., & Ideker, T. (2007) · Nature Reviews Genetics

Bioinformatics and Genomic NetworksGene Regulatory Network Analysis

Cited by 207

NF-κB-Activating Complex Engaged in Response to EGFR Oncogene Inhibition Drives Tumor Cell Survival and Residual Disease in Lung Cancer

Blakely, C. M., Pazarentzos, E., Olivas, V., Asthana, S., Yan, J. J., Tan, I., Hrustanovic, G., Chan, E., Lin, L., Neel, D. S., et al. (2015) · Cell Reports

Lung Cancer Treatments and MutationsNF-κB Signaling Pathways

Cited by 204

Functional Maps of Protein Complexes from Quantitative Genetic Interaction Data

Bandyopadhyay, S., Kelley, R., Krogan, N. J., & Ideker, T. (2008) · PLoS Computational Biology

Bioinformatics and Genomic NetworksGene Regulatory Network Analysis

Cited by 141

Epithelial-to-Mesenchymal Transition Rewires the Molecular Path to PI3K-Dependent Proliferation

Salt, M. B., Bandyopadhyay, S., & McCormick, F. (2014) · Cancer Discovery

Cancer Cells and MetastasisPI3K/AKT/mTOR signaling in cancer

Cited by 124

Targeting RAS-driven human cancer cells with antibodies to upregulated and essential cell-surface proteins

Martinko, A. J., Truillet, C., Julien, O., Diaz, J. E., Horlbeck, M. A., Whiteley, G., Blonder, J., Weissman, J. S., Bandyopadhyay, S., Evans, M. J., et al. (2018) · eLife

Protein Kinase Regulation and GTPase SignalingProtein Degradation and Inhibitors

Cited by 91

Kinome rewiring reveals AURKA limits PI3K-pathway inhibitor efficacy in breast cancer

Donnella, H. J., Webber, J. T., Levin, R. S., Camarda, R., Momcilovic, O., Bayani, N., Shah, K. N., Korkola, J. E., Shokat, K. M., Goga, A., et al. (2018) · Nature Chemical Biology

PI3K/AKT/mTOR signaling in cancerAdvanced Breast Cancer Therapies

Cited by 90