Jagodnik, Kathleen M.

Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

Kuleshov, M. V., Jones, M. R., Rouillard, A. D., Fernandez, N. F., Duan, Q., Wang, Z., Koplev, S., Jenkins, S. L., Jagodnik, K. M., Lachmann, A., et al. (2016) · Nucleic Acids Research

Bioinformatics and Genomic NetworksGenomics and Phylogenetic Studies

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Gene set knowledge discovery with enrichr

Xie, Z., Bailey, A., Kuleshov, M. V., Clarke, D. J. B., Evangelista, J. E., Jenkins, S. L., Lachmann, A., Wojciechowicz, M. L., Kropiwnicki, E., Jagodnik, K. M., et al. (2021) · Current Protocols

Bioinformatics and Genomic NetworksGenomics and Phylogenetic Studies

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ChEA3: transcription factor enrichment analysis by orthogonal omics integration

Keenan, A. B., Torre, D., Lachmann, A., Leong, A. K., Wojciechowicz, M. L., Utti, V., Jagodnik, K. M., Kropiwnicki, E., Wang, Z., & Ma’ayan, A. (2019) · Nucleic Acids Research

Bioinformatics and Genomic NetworksGenomics and Chromatin Dynamics

Cited by 1,136

Massive mining of publicly available RNA-seq data from human and mouse

Lachmann, A., Torre, D., Keenan, A. B., Jagodnik, K. M., Lee, H. J., Wang, L., Silverstein, M. C., & Ma’ayan, A. (2018) · Nature Communications

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

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The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations

Keenan, A. B., Jenkins, S. L., Jagodnik, K. M., Koplev, S., He, E., Torre, D., Wang, Z., Dohlman, A. B., Silverstein, M. C., Lachmann, A., et al. (2018) · Cell Systems

Bioinformatics and Genomic NetworksGene Regulatory Network Analysis

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Data Portal for the Library of Integrated Network-based cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data

Koleti, A., Terryn, R., Stathias, V., Chung, C., Cooper, D. J., Turner, J. P., Vidović, D., Forlin, M., Kelley, T. T., D’Urso, A., et al. (2018) · Nucleic Acids Research

Bioinformatics and Genomic NetworksResearch Data Management Practices

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AI and narrative embeddings detect PTSD following childbirth via birth stories

Bartal, A., Jagodnik, K. M., Chan, S. J., & Dekel, S. (2024) · Scientific Reports

Mental Health via WritingMaternal Mental Health During Pregnancy and Postpartum

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Identifying women with postdelivery posttraumatic stress disorder using natural language processing of personal childbirth narratives

Bartal, A., Jagodnik, K. M., Chan, S. J., Babu, M. S., & Dekel, S. (2023) · American Journal of Obstetrics & Gynecology MFM

Maternal Mental Health During Pregnancy and PostpartumMental Health via Writing

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Identifying Women with Post-Delivery Posttraumatic Stress Disorder using Natural Language Processing of Personal Childbirth Narratives

Bartal, A., Jagodnik, K. M., Chan, S. J., Babu, M. S., & Dekel, S. (2022) · American Journal of Obstetrics & Gynecology MFM

Maternal Mental Health During Pregnancy and PostpartumMental Health via Writing

Cited by 44

A diagnostic questionnaire for childbirth related posttraumatic stress disorder: a validation study

Arora, I. H., Woscoboinik, G. G., Mokhtar, S., Quagliarini, B., Bartal, A., Jagodnik, K. M., Barry, R. L., Edlow, A. G., Orr, S. P., & Dekel, S. (2024) · American Journal of Obstetrics and Gynecology

Maternal Mental Health During Pregnancy and PostpartumMaternal and Perinatal Health Interventions

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