Pascarelli, Stefano

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

Zhou, N., Jiang, Y., Bergquist, T. R., Lee, A. J., Kacsoh, B. Z., Crocker, A. W., Lewis, K. A., Georghiou, G., Nguyen, H. N., Hamid, M. N., et al. (2019) · Genome Biology

Bioinformatics and Genomic NetworksGenomics and Phylogenetic Studies

Cited by 452

Orthology inference at scale with FastOMA

Majidian, S., Nevers, Y., Yazdizadeh Kharrazi, A., Warwick Vesztrocy, A., Pascarelli, S., Moi, D., Glover, N., Altenhoff, A. M., & Dessimoz, C. (2025) · Nature Methods

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 30

Identification of residue inversions in large phylogenies of duplicated proteins

Pascarelli, S., & Laurino, P. (2021) · PLoS Computational Biology

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 3