Giri, Nabin

Deep learning for reconstructing protein structures from cryo-EM density maps: Recent advances and future directions

Giri, N., Roy, R. S., & Cheng, J. (2023) · Current Opinion in Structural Biology

Advanced Electron Microscopy Techniques and ApplicationsProtein Structure and Dynamics

Cited by 59

De Novo Atomic Protein Structure Modeling for Cryo-EM Density Maps Using 3D Transformer and Hidden Markov Model

Giri, N., & Cheng, J. (2024) · Nature Communications

Advanced Electron Microscopy Techniques and ApplicationsProtein Structure and Dynamics

Cited by 47

Improving Protein-Ligand Interaction Modeling with cryo-EM Data, Templates, and Deep Learning in 2021 Ligand Model Challenge

Giri, N., & Cheng, J. (2022) · Biomolecules

Advanced Electron Microscopy Techniques and ApplicationsProtein Structure and Dynamics

Cited by 28

Cryo2StructData: A Large Labeled Cryo-EM Density Map Dataset for AI-based Modeling of Protein Structures

Giri, N., Wang, L., & Cheng, J. (2023) · Scientific Data

Advanced Electron Microscopy Techniques and ApplicationsProtein Structure and Dynamics

Cited by 17

Cryo2StructData: A Large Labeled Cryo-EM Density Map Dataset for AI-based Modeling of Protein Structures

Giri, N., Wang, L., & Cheng, J. (2024) · Scientific Data

Advanced Electron Microscopy Techniques and ApplicationsProtein Structure and Dynamics

Cited by 17