Bader, Joel S.

Genome sequencing in microfabricated high-density picolitre reactors

Margulies, M., Egholm, M., Altman, W. E., Attiya, S., Bader, J. S., Bemben, L. A., Berka, J., Braverman, M. S., Chen, Y.-J., Chen, Z., et al. (2005) · Nature

Microfluidic and Capillary Electrophoresis ApplicationsGenomics and Phylogenetic Studies

Cited by 7,693

Transcriptome analysis reveals dysregulation of innate immune response genes and neuronal activity-dependent genes in autism

Gupta, S., Ellis, S. E., Ashar, F. N., Moes, A., Bader, J. S., Zhan, J., West, A. B., & Arking, D. E. (2014) · Nature Communications

Autism Spectrum Disorder ResearchGenetics and Neurodevelopmental Disorders

Cited by 504

Myocardial Gene Expression Signatures in Human Heart Failure With Preserved Ejection Fraction

Hahn, V. S., Knutsdottir, H., Luo, X., Bedi, K., Margulies, K. B., Haldar, S. M., Stolina, M., Yin, J., Khakoo, A. Y., Vaishnav, J., et al. (2021) · Circulation

Cardiovascular Function and Risk FactorsHeart Failure Treatment and Management

Cited by 291

“Perfect” designer chromosome V and behavior of a ring derivative.

Xie, Z.-X., Li, B.-Z., Mitchell, L. A., Wu, Y., Qi, X., Jin, Z., Jia, B., Wang, X., Zeng, B.-X., Liu, H.-M., et al. (2017) · Science

Fungal and yeast genetics researchMicrobial Metabolic Engineering and Bioproduction

Cited by 255

An expanded universe of cancer targets

Hahn, W. C., Bader, J. S., Braun, T. P., Califano, A., Clemons, P. A., Druker, B. J., Ewald, A. J., Fu, H., Jagu, S., Kemp, C. J., et al. (2021) · Cell

Cancer Genomics and DiagnosticsChromatin Remodeling and Cancer

Cited by 213

Deep functional analysis of synII, a 770-kilobase synthetic yeast chromosome.

Shen, Y., Wang, Y., Chen, T., Gao, F., Gong, J., Abramczyk, D., Walker, R., Zhao, H., Chen, S., Liu, W., et al. (2017) · Science

Fungal and yeast genetics researchMicrobial Metabolic Engineering and Bioproduction

Cited by 202

Where Have All the Interactions Gone? Estimating the Coverage of Two-Hybrid Protein Interaction Maps

Huang, H., Jedynak, B. M., & Bader, J. S. (2007) · PLoS Computational Biology

Bioinformatics and Genomic NetworksAdvanced Proteomics Techniques and Applications

Cited by 182

BRCA1 and S phase DNA repair pathways restrict LINE-1 retrotransposition in human cells

Mita, P., Sun, X., Fenyö, D., Kahler, D. J., Li, D., Agmon, N., Wudzinska, A., Keegan, S., Bader, J. S., Yun, C., et al. (2020) · Nature Structural & Molecular Biology

DNA Repair MechanismsChromosomal and Genetic Variations

Cited by 113

Genetic interaction mapping informs integrative structure determination of protein complexes

Braberg, H., Echeverria, I., Bohn, S., Cimermancic, P., Shiver, A., Alexander, R., Xu, J., Shales, M., Dronamraju, R., Jiang, S., et al. (2020) · Science

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 37

Dynamic Networks from Hierarchical Bayesian Graph Clustering

Park, Y., Moore, C., & Bader, J. S. (2010) · PLoS ONE

Bioinformatics and Genomic NetworksGene Regulatory Network Analysis

Cited by 34

RNA-Seq optimization with eQTL gold standards

Ellis, S. E., Gupta, S., Ashar, F. N., Bader, J. S., West, A. B., & Arking, D. E. (2013) · BMC Genomics

Gene expression and cancer classificationGenomics and Phylogenetic Studies

Cited by 30