O’Connor, Carolyn
Salk Institute for Biological Studies
13 papers on CoChatORCID 0000-0002-3301-7912
Most cited papers
- Verified
An environment-dependent transcriptional network specifies human microglia identity
Gosselin, D., Skola, D., Coufal, N. G., Holtman, I. R., Schlachetzki, J. C. M., Sajti, E., Jaeger, B. N., O’Connor, C., Fitzpatrick, C., Pasillas, M. P., et al. (2017) · Science
Neuroinflammation and Neurodegeneration MechanismsSingle-cell and spatial transcriptomics
Cited by 1,220
- Verified
Brain cell type–specific enhancer–promoter interactome maps and disease - risk association
Nott, A., Holtman, I. R., Coufal, N. G., Schlachetzki, J. C. M., Yu, M., Hu, R., Han, C. Z., Pena, M., Xiao, J., Wu, Y., et al. (2019) · Science
Genomics and Chromatin DynamicsGenetic Associations and Epidemiology
Cited by 699
- Verified
A multimodal cell census and atlas of the mammalian primary motor cortex
BRAIN Initiative Cell Census Network (BICCN), BRAIN Initiative Cell Census Network (BICCN) Corresponding authors, Callaway, E. M., Dong, H.-W., Ecker, J. R., Hawrylycz, M. J., Huang, Z. J., Lein, E. S., Ngai, J., Osten, P., et al. (2021) · Nature
Single-cell and spatial transcriptomicsGenomics and Chromatin Dynamics
Cited by 522
- Verified
Microglia use TAM receptors to detect and engulf amyloid β plaques
Huang, Y., Happonen, K. E., Burrola, P. G., O’Connor, C., Hah, N., Huang, L., Nimmerjahn, A., & Lemke, G. (2021) · Nature Immunology
Neuroinflammation and Neurodegeneration MechanismsAlzheimer's disease research and treatments
Cited by 483
- Verified
Simultaneous profiling of 3D genome structure and DNA methylation in single human cells
Lee, D.-S., Luo, C., Zhou, J., Chandran, S., Rivkin, A., Bartlett, A., Nery, J. R., Fitzpatrick, C., O’Connor, C., Dixon, J. R., et al. (2019) · Nature Methods
Genomics and Chromatin DynamicsEpigenetics and DNA Methylation
Cited by 340
- Verified
Immune-evasive human islet-like organoids ameliorate diabetes
Yoshihara, E., O’Connor, C., Gasser, E., Wei, Z., Oh, T. G., Tseng, T. W., Wang, D., Cayabyab, F., Dai, Y., Yu, R. T., et al. (2020) · Nature
Pancreatic function and diabetesPluripotent Stem Cells Research
Cited by 333
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DNA Methylation Atlas of the Mouse Brain at Single-Cell Resolution
Liu, H., Zhou, J., Tian, W., Luo, C., Bartlett, A., Aldridge, A., Lucero, J., Osteen, J. K., Nery, J. R., Chen, H., et al. (2020) · Nature
Single-cell and spatial transcriptomicsEpigenetics and DNA Methylation
Cited by 290
- Verified
DNA methylation atlas of the mouse brain at single-cell resolution
Liu, H., Zhou, J., Tian, W., Luo, C., Bartlett, A., Aldridge, A., Lucero, J., Osteen, J. K., Nery, J. R., Chen, H., et al. (2021) · Nature
Single-cell and spatial transcriptomicsEpigenetics and DNA Methylation
Cited by 289
- Verified
Robust single-cell DNA methylome profiling with snmC-seq2
Luo, C., Rivkin, A., Zhou, J., Sandoval, J. P., Kurihara, L., Lucero, J., Castanon, R., Nery, J. R., Pinto-Duarte, A., Bui, B., et al. (2018) · Nature Communications
Epigenetics and DNA MethylationSingle-cell and spatial transcriptomics
Cited by 189
- Verified
Pathogen-Mediated Inhibition of Anorexia Promotes Host Survival and Transmission
Rao, S., Schieber, A. M. P., O’Connor, C. P., Leblanc, M., Michel, D., & Ayres, J. S. (2017) · Cell
Vagus Nerve Stimulation ResearchRegulation of Appetite and Obesity
Cited by 167
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Single-cell DNA methylation and 3D genome architecture in the human brain
Tian, W., Zhou, J., Bartlett, A., Zeng, Q., Liu, H., Castanon, R. G., Kenworthy, M., Altshul, J., Valadon, C., Aldridge, A., et al. (2023) · Science
Epigenetics and DNA MethylationSingle-cell and spatial transcriptomics
Cited by 154
- Verified
Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain
Liu, H., Zeng, Q., Zhou, J., Bartlett, A., Wang, B.-A., Berube, P., Tian, W., Kenworthy, M., Altshul, J., Nery, J. R., et al. (2023) · Nature
Epigenetics and DNA MethylationSingle-cell and spatial transcriptomics
Cited by 139
- Verified
Epigenomic Diversity of Cortical Projection Neurons in the Mouse Brain
Zhang, Z., Zhou, J., Tan, P., Pang, Y., Rivkin, A., Kirchgessner, M. A., Williams, E., Lee, C.-T., Liu, H., Franklin, A. D., et al. (2020) · Nature
Single-cell and spatial transcriptomicsEpigenetics and DNA Methylation
Cited by 75
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