Vranken, Wim

Critical assessment of protein intrinsic disorder prediction

Necci, M., Piovesan, D., Predictors, C., Hoque, M. T., Walsh, I., Iqbal, S., Vendruscolo, M., Sormanni, P., Wang, C., Raimondi, D., et al. (2021) · Nature Methods

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 343

PDBe-KB: collaboratively defining the biological context of structural data

PDBe-KB consortium, Varadi, M., Anyango, S., Armstrong, D., Berrisford, J., Choudhary, P., Deshpande, M., Nadzirin, N., Nair, S. S., Pravda, L., et al. (2022) · Nucleic Acids Research

Enzyme Structure and FunctionProtein Structure and Dynamics

Cited by 82

Deep mutational scanning of essential bacterial proteins can guide antibiotic development

Dewachter, L., Brooks, A. N., Noon, K., Cialek, C., Clark-ElSayed, A., Schalck, T., Krishnamurthy, N., Versées, W., Vranken, W., & Michiels, J. (2023) · Nature Communications

CRISPR and Genetic EngineeringBacterial Genetics and Biotechnology

Cited by 43

Assessing the relation between protein phosphorylation, AlphaFold3 models and conformational variability

Ramasamy, P., Zuallaert, J., Martens, L., & Vranken, W. F. (2025) · Protein Science

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 15

Assessing the relation between protein phosphorylation, AlphaFold3 models, and conformational variability

Ramasamy, P., Zuallaert, J., Martens, L., & Vranken, W. F. (2026) · Protein Science

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 15

Gradations in protein dynamics captured by experimental NMR are not well represented by AlphaFold2 models and other computational metrics

Gavalda-Garcia, J., Dixit, B., Díaz, A., Ghysels, A., & Vranken, W. (2025) · Journal of Molecular Biology

Protein Structure and DynamicsAdvanced NMR Techniques and Applications

Cited by 12

In silico identification of archaeal DNA-binding proteins

Donvil, L., Housmans, J. A. J., Peeters, E., Vranken, W., & Orlando, G. (2025) · Bioinformatics

Machine Learning in BioinformaticsGenomics and Phylogenetic Studies

Cited by 3

GPCRchimeraDB: A Database of Chimeric G Protein-Coupled Receptors (GPCRs) to Assist Their Design

Crauwels, C., Díaz, A., & Vranken, W. (2025) · Journal of Molecular Biology

Receptor Mechanisms and SignalingComputational Drug Discovery Methods

Cited by 2