Gunawardena, Jeremy

How many human proteoforms are there?

Aebersold, R., Agar, J. N., Amster, I. J., Baker, M. S., Bertozzi, C. R., Boja, E. S., Costello, C. E., Cravatt, B. F., Fenselau, C., Garcia, B. A., et al. (2018) · Nature Chemical Biology

Advanced Proteomics Techniques and ApplicationsMass Spectrometry Techniques and Applications

Cited by 907

Post‐translational modification: nature's escape from genetic imprisonment and the basis for dynamic information encoding

Prabakaran, S., Lippens, G., Steen, H., & Gunawardena, J. (2012) · WIREs Systems Biology and Medicine

Protein Structure and DynamicsAdvanced Proteomics Techniques and Applications

Cited by 335

Allosteric conformational ensembles have unlimited capacity for integrating information

Biddle, J. W., Martinez-Corral, R., Wong, F., & Gunawardena, J. (2021) · eLife

Protein Structure and DynamicsGene Regulatory Network Analysis

Cited by 41

Estimating the Distribution of Protein Post-Translational Modification States by Mass Spectrometry

Compton, P. D., Kelleher, N. L., & Gunawardena, J. (2018) · Journal of Proteome Research

Advanced Proteomics Techniques and ApplicationsMass Spectrometry Techniques and Applications

Cited by 30

Transcriptional kinetic synergy: A complex landscape revealed by integrating modeling and synthetic biology

Martinez-Corral, R., Park, M., Biette, K. M., Friedrich, D., Scholes, C., Khalil, A. S., Gunawardena, J., & DePace, A. H. (2023) · Cell Systems

Gene Regulatory Network AnalysisBacterial Genetics and Biotechnology

Cited by 29

Emergence of activation or repression in transcriptional control under a fixed molecular context

Martinez-Corral, R., Friedrich, D., Frömel, R., Velten, L., Gunawardena, J., & DePace, A. H. (2024) · Proceedings of the National Academy of Sciences

Gene Regulatory Network AnalysisGenomics and Chromatin Dynamics

Cited by 18

MSModDetector: a tool for detecting mass shifts and post-translational modifications in individual ion mass spectrometry data

Faizi, M., Fellers, R. T., Lu, D., Drown, B. S., Jambhekar, A., Lahav, G., Kelleher, N. L., & Gunawardena, J. (2024) · Bioinformatics

Advanced Proteomics Techniques and ApplicationsMass Spectrometry Techniques and Applications

Cited by 4

MSModDetector: A Tool for Detecting Mass Shifts and Post-Translational Modifications in Individual Ion Mass Spectrometry Data

Faizi, M., Fellers, R. T., Lu, D., Drown, B. S., Jambhekar, A., Lahav, G., Kelleher, N. L., & Gunawardena, J. (2023) · Bioinformatics

Advanced Proteomics Techniques and ApplicationsMass Spectrometry Techniques and Applications

Cited by 4