Putnam, Nicholas H.

Towards complete and error-free genome assemblies of all vertebrate species

Rhie, A., McCarthy, S. A., Fedrigo, O., Damas, J., Formenti, G., Koren, S., Uliano-Silva, M., Chow, W., Fungtammasan, A., Kim, J., et al. (2021) · Nature

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 3,097

Towards complete and error-free genome assemblies of all vertebrate species

Rhie, A., McCarthy, S. A., Fedrigo, O., Damas, J., Formenti, G., Koren, S., Uliano-Silva, M., Chow, W., Fungtammasan, A., Gedman, G. L., et al. (2020) · Nature

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 3,097

Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization

Putnam, N. H., Srivastava, M., Hellsten, U., Dirks, B., Chapman, J., Salamov, A., Terry, A., Shapiro, H., Lindquist, E., Kapitonov, V. V., et al. (2007) · Science

Marine Invertebrate Physiology and EcologyGenomics and Phylogenetic Studies

Cited by 1,555

The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans

King, N., Westbrook, M. J., Young, S. L., Kuo, A., Abedin, M., Chapman, J., Fairclough, S., Hellsten, U., Isogai, Y., Letunic, I., et al. (2008) · Nature

Marine Invertebrate Physiology and EcologyProtist diversity and phylogeny

Cited by 1,139

Genome evolution in the allotetraploid frog Xenopus laevis

Session, A. M., Uno, Y., Kwon, T., Chapman, J. A., Toyoda, A., Takahashi, S., Fukui, A., Hikosaka, A., Suzuki, A., Kondo, M., et al. (2016) · Nature

Chromosomal and Genetic VariationsGenomics and Phylogenetic Studies

Cited by 949

The Trichoplax genome and the nature of placozoans

Srivastava, M., Begovic, E., Chapman, J., Putnam, N. H., Hellsten, U., Kawashima, T., Kuo, A., Mitros, T., Salamov, A., Carpenter, M. L., et al. (2008) · Nature

Marine Invertebrate Physiology and EcologyGenomics and Phylogenetic Studies

Cited by 889

The dynamic genome of Hydra

Chapman, J. A., Kirkness, E. F., Simakov, O., Hampson, S. E., Mitros, T., Weinmaier, T., Rattei, T., Balasubramanian, P. G., Borman, J., Busam, D., et al. (2010) · Nature

Marine Invertebrate Physiology and EcologyDevelopmental Biology and Gene Regulation

Cited by 810

Chromosome-scale shotgun assembly using an in vitro method for long-range linkage

Putnam, N. H., O'Connell, B. L., Stites, J. C., Rice, B. J., Blanchette, M., Calef, R., Troll, C. J., Fields, A., Hartley, P. D., Sugnet, C. W., et al. (2016) · Genome Research

Genomics and Phylogenetic StudiesGenomic variations and chromosomal abnormalities

Cited by 732

The Genome of the Ctenophore Mnemiopsis leidyi and Its Implications for Cell Type Evolution

Ryan, J. F., Pang, K., Schnitzler, C. E., Nguyen, A.-D., Moreland, R. T., Simmons, D. K., Koch, B. J., Francis, W. R., Havlak, P., Program, N. C. S., et al. (2013) · Science

Marine Invertebrate Physiology and EcologyDevelopmental Biology and Gene Regulation

Cited by 682

Insights into bilaterian evolution from three spiralian genomes

Simakov, O., Marletaz, F., Cho, S.-J., Edsinger-Gonzales, E., Havlak, P., Hellsten, U., Kuo, D.-H., Larsson, T., Lv, J., Arendt, D., et al. (2013) · Nature

Genomics and Phylogenetic StudiesMarine Invertebrate Physiology and Ecology

Cited by 656

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

Palenik, B., Grimwood, J., Aerts, A., Rouzé, P., Salamov, A., Putnam, N., Dupont, C., Jorgensen, R., Derelle, E., Rombauts, S., et al. (2007) · Proceedings of the National Academy of Sciences

Protist diversity and phylogenyChromosomal and Genetic Variations

Cited by 625

The amphioxus genome illuminates vertebrate origins and cephalochordate biology

Holland, L. Z., Albalat, R., Azumi, K., Benito-Gutiérrez, È., Blow, M. J., Bronner-Fraser, M., Brunet, F., Butts, T., Candiani, S., Dishaw, L. J., et al. (2008) · Genome Research

Developmental Biology and Gene RegulationChromosomal and Genetic Variations

Cited by 512

Deeply conserved synteny resolves early events in vertebrate evolution

Simakov, O., Marlétaz, F., Yue, J.-X., O’Connell, B., Jenkins, J., Brandt, A., Calef, R., Tung, C.-H., Huang, T.-K., Schmutz, J., et al. (2020) · Nature Ecology & Evolution

Chromosomal and Genetic VariationsGenome Rearrangement Algorithms

Cited by 363