Lis, John T.

Getting up to speed with transcription elongation by RNA polymerase II

Jonkers, I., & Lis, J. T. (2015) · Nature Reviews Molecular Cell Biology

Genomics and Chromatin DynamicsRNA Research and Splicing

Cited by 876

Precise Maps of RNA Polymerase Reveal How Promoters Direct Initiation and Pausing

Kwak, H., Fuda, N. J., Core, L. J., & Lis, J. T. (2013) · Science

Genomics and Chromatin DynamicsRNA Research and Splicing

Cited by 849

The 4D nucleome project

the 4D Nucleome Network, Dekker, J., Belmont, A. S., Guttman, M., Leshyk, V. O., Lis, J. T., Lomvardas, S., Mirny, L. A., O’Shea, C. C., Park, P. J., et al. (2017) · Nature

Genomics and Chromatin DynamicsNuclear Structure and Function

Cited by 732

Analysis of nascent RNA identifies a unified architecture of initiation regions at mammalian promoters and enhancers

Core, L. J., Martins, A. L., Danko, C. G., Waters, C. T., Siepel, A., & Lis, J. T. (2014) · Nature Genetics

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

Cited by 693

Genome-wide dynamics of Pol II elongation and its interplay with promoter proximal pausing, chromatin, and exons

Jonkers, I., Kwak, H., & Lis, J. T. (2014) · eLife

Genomics and Chromatin DynamicsRNA Research and Splicing

Cited by 581

Defining mechanisms that regulate RNA polymerase II transcription in vivo

Fuda, N. J., Ardehali, M. B., & Lis, J. T. (2009) · Nature

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

Cited by 576

Mammalian heat shock response and mechanisms underlying its genome-wide transcriptional regulation

Mahat, D. B., Salamanca, H. H., Duarte, F. M., Danko, C. G., & Lis, J. T. (2016) · Molecular Cell

Heat shock proteins researchGenomics and Chromatin Dynamics

Cited by 426

Coordinated Effects of Sequence Variation on DNA Binding, Chromatin Structure, and Transcription

Kilpinen, H., Waszak, S. M., Gschwind, A. R., Raghav, S. K., Witwicki, R. M., Orioli, A., Migliavacca, E., Wiederkehr, M., Gutierrez-Arcelus, M., Panousis, N. I., et al. (2013) · Science

Genomics and Chromatin DynamicsGenetic Associations and Epidemiology

Cited by 337

Signaling Pathways Differentially Affect RNA Polymerase II Initiation, Pausing, and Elongation Rate in Cells

Danko, C. G., Hah, N., Luo, X., Martins, A. L., Core, L., Lis, J. T., Siepel, A., & Kraus, W. L. (2013) · Molecular Cell

Genomics and Chromatin DynamicsRNA Research and Splicing

Cited by 333

Specific Contributions of Histone Tails and their Acetylation to the Mechanical Stability of Nucleosomes

Brower-Toland, B., Wacker, D. A., Fulbright, R. M., Lis, J. T., Kraus, W. L., & Wang, M. D. (2005) · Journal of Molecular Biology

Genomics and Chromatin DynamicsNuclear Structure and Function

Cited by 198

Transcriptional response to stress is pre-wired by promoter and enhancer architecture

Vihervaara, A., Mahat, D. B., Guertin, M. J., Chu, T., Danko, C. G., Lis, J. T., & Sistonen, L. (2017) · Nature Communications

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

Cited by 164

Spt6 enhances the elongation rate of RNA polymerase II in vivo

Ardehali, M. B., Yao, J., Adelman, K., Fuda, N. J., Petesch, S. J., Webb, W. W., & Lis, J. T. (2009) · The EMBO Journal

Genomics and Chromatin DynamicsNuclear Structure and Function

Cited by 157

Intranuclear Distribution and Local Dynamics of RNA Polymerase II during Transcription Activation

Yao, J., Ardehali, M. B., Fecko, C. J., Webb, W. W., & Lis, J. T. (2007) · Molecular Cell

Genomics and Chromatin DynamicsNuclear Structure and Function

Cited by 111

Chromatin conformation remains stable upon extensive transcriptional changes driven by heat shock

Ray, J., Munn, P. R., Vihervaara, A., Lewis, J. J., Ozer, A., Danko, C. G., & Lis, J. T. (2019) · Proceedings of the National Academy of Sciences

Genomics and Chromatin DynamicsHeat shock proteins research

Cited by 109