Hillmann, Benjamin

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Bolyen, E., Rideout, J. R., Dillon, M. R., Bokulich, N. A., Abnet, C. C., Al-Ghalith, G. A., Alexander, H., Alm, E. J., Arumugam, M., Asnicar, F., et al. (2019) · Nature Biotechnology

Scientific Computing and Data ManagementGut microbiota and health

Cited by 23,742

US immigration westernizes the human gut microbiome

Vangay, P., Johnson, A. J., Ward, T. L., Al-Ghalith, G. A., Shields-Cutler, R. R., Hillmann, B. M., Lucas, S. K., Beura, L. K., Thompson, E. A., Till, L. M., et al. (2018) · Cell

Gut microbiota and healthGastrointestinal motility and disorders

Cited by 794

Daily sampling reveals personalized diet-microbiome associations in humans

Johnson, A. J., Vangay, P., Al-Ghalith, G. A., Hillmann, B. M., Ward, T. L., Shields-Cutler, R. R., Kim, A. D., Shmagel, A. K., Syed, A. N., Walter, J., et al. (2019) · Cell Host & Microbe

Gut microbiota and healthNutritional Studies and Diet

Cited by 742

Stable Engraftment of Bifidobacterium longum AH1206 in the Human Gut Depends on Individualized Features of the Resident Microbiome

Maldonado-Gómez, M. X., Martínez, I., Bottacini, F., O’Callaghan, A., Ventura, M., van Sinderen, D., Hillmann, B., Vangay, P., Knights, D., Hutkins, R. W., et al. (2016) · Cell Host & Microbe

Gut microbiota and healthProbiotics and Fermented Foods

Cited by 517

Evaluating the Information Content of Shallow Shotgun Metagenomics

Hillmann, B., Al-Ghalith, G. A., Shields-Cutler, R. R., Zhu, Q., Gohl, D. M., Beckman, K. B., Knight, R., & Knights, D. (2018) · mSystems

Genomics and Phylogenetic StudiesGut microbiota and health

Cited by 474

Fecal microbiota transplantation reverses antibiotic and chemotherapy-induced gut dysbiosis in mice

Le Bastard, Q., Ward, T., Sidiropoulos, D., Hillmann, B. M., Chun, C. L., Sadowsky, M. J., Knights, D., & Montassier, E. (2018) · Scientific Reports

Gut microbiota and healthClostridium difficile and Clostridium perfringens research

Cited by 134

Turkers, Scholars, "Arafat" and "Peace": Cultural Communities and Algorithmic Gold Standards

Sen, S., Giesel, M. E., Gold, R., Hillmann, B., Lesicko, M., Naden, S., Russell, J., Wang, Z. (., & Hecht, B. (2015) · Proceedings of the 18th ACM Conference on Computer Supported Cooperative Work & Social Computing

Mobile Crowdsensing and CrowdsourcingNatural Language Processing Techniques

Cited by 47