Rasmussen, Simon

Identification of acquired antimicrobial resistance genes

Zankari, E., Hasman, H., Cosentino, S., Vestergaard, M., Rasmussen, S., Lund, O., Aarestrup, F. M., & Larsen, M. V. (2012) · Journal of Antimicrobial Chemotherapy

Antibiotic Resistance in BacteriaBacterial Identification and Susceptibility Testing

Cited by 4,980

Richness of human gut microbiome correlates with metabolic markers

Le Chatelier, E., Nielsen, T., Qin, J., Prifti, E., Hildebrand, F., Falony, G., Almeida, M., Arumugam, M., Batto, J.-M., Kennedy, S., et al. (2013) · Nature

Gut microbiota and healthAdipokines, Inflammation, and Metabolic Diseases

Cited by 4,662

Population genomics of Bronze Age Eurasia

Allentoft, M. E., Sikora, M., Sjögren, K.-G., Rasmussen, S., Rasmussen, M., Stenderup, J., Damgaard, P. B., Schroeder, H., Ahlström, T., Vinner, L., et al. (2015) · Nature

Forensic and Genetic ResearchPleistocene-Era Hominins and Archaeology

Cited by 1,550

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

Hendriksen, R. S., Munk, P., Njage, P., van Bunnik, B., McNally, L., Lukjancenko, O., Röder, T., Nieuwenhuijse, D., Pedersen, S. K., Kjeldgaard, J., et al. (2019) · Nature Communications

Pharmaceutical and Antibiotic Environmental ImpactsAntibiotic Resistance in Bacteria

Cited by 1,199

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

MetaHIT Consortium, Nielsen, H. B., Almeida, M., Juncker, A. S., Rasmussen, S., Li, J., Sunagawa, S., Plichta, D. R., Gautier, L., Pedersen, A. G., et al. (2014) · Nature Biotechnology

Genomics and Phylogenetic StudiesMicrobial Community Ecology and Physiology

Cited by 1,184

Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans

Raghavan, M., Skoglund, P., Graf, K. E., Metspalu, M., Albrechtsen, A., Moltke, I., Rasmussen, S., Stafford Jr, T. W., Orlando, L., Metspalu, E., et al. (2014) · Nature

Forensic and Genetic ResearchPleistocene-Era Hominins and Archaeology

Cited by 963

An aboriginal Australian genome reveals separate human dispersals into Asia

Rasmussen, M., Guo, X., Wang, Y., Lohmueller, K. E., Rasmussen, S., Albrechtsen, A., Skotte, L., Lindgreen, S., Metspalu, M., Jombart, T., et al. (2011) · Science

Forensic and Genetic ResearchPleistocene-Era Hominins and Archaeology

Cited by 787

A genomic history of Aboriginal Australia

Malaspinas, A.-S., Westaway, M. C., Muller, C., Sousa, V. C., Lao, O., Alves, I., Bergström, A., Athanasiadis, G., Cheng, J. Y., Crawford, J. E., et al. (2016) · Nature

Forensic and Genetic ResearchAustralian Indigenous Culture and History

Cited by 650

The genome of a Late Pleistocene human from a Clovis burial site in western Montana

Rasmussen, M., Anzick, S. L., Waters, M. R., Skoglund, P., DeGiorgio, M., Stafford, T. W., Rasmussen, S., Moltke, I., Albrechtsen, A., Doyle, S. M., et al. (2014) · Nature

Forensic and Genetic ResearchPleistocene-Era Hominins and Archaeology

Cited by 562

Genomic evidence for the Pleistocene and recent population history of Native Americans

Raghavan, M., Steinrücken, M., Harris, K., Schiffels, S., Rasmussen, S., DeGiorgio, M., Albrechtsen, A., Valdiosera, C., Ávila-Arcos, M. C., Malaspinas, A.-S., et al. (2015) · Science

Forensic and Genetic ResearchGenetic diversity and population structure

Cited by 540

The prehistoric peopling of Southeast Asia

McColl, H., Racimo, F., Vinner, L., Demeter, F., Gakuhari, T., Moreno-Mayar, J. V., van Driem, G., Gram Wilken, U., Seguin-Orlando, A., de la Fuente Castro, C., et al. (2018) · Science

Forensic and Genetic ResearchPacific and Southeast Asian Studies

Cited by 517

Derived immune and ancestral pigmentation alleles in a 7,000-year-old Mesolithic European

Olalde, I., Allentoft, M. E., Sánchez-Quinto, F., Santpere, G., Chiang, C. W. K., DeGiorgio, M., Prado-Martinez, J., Rodríguez, J. A., Rasmussen, S., Quilez, J., et al. (2014) · Nature

Forensic and Genetic ResearchPleistocene-Era Hominins and Archaeology

Cited by 360

Unraveling ancestry, kinship, and violence in a Late Neolithic mass grave

Schroeder, H., Margaryan, A., Szmyt, M., Theulot, B., Włodarczak, P., Rasmussen, S., Gopalakrishnan, S., Szczepanek, A., Konopka, T., Jensen, T. Z. T., et al. (2019) · Proceedings of the National Academy of Sciences

Forensic and Genetic ResearchForensic Anthropology and Bioarchaeology Studies

Cited by 195

Origins and genetic legacies of the Caribbean Taino

Schroeder, H., Sikora, M., Gopalakrishnan, S., Cassidy, L. M., Maisano Delser, P., Sandoval Velasco, M., Schraiber, J. G., Rasmussen, S., Homburger, J. R., Ávila-Arcos, M. C., et al. (2018) · Proceedings of the National Academy of Sciences

Forensic and Genetic ResearchGenetic diversity and population structure

Cited by 126

Discovery of drug-omics associations in type 2 diabetes with generative deep-learning models

Allesøe, R. L., Lundgaard, A. T., Hernández Medina, R., Aguayo-Orozco, A., Johansen, J., Nissen, J. N., Brorsson, C., Mazzoni, G., Niu, L., Biel, J. H., et al. (2023) · Nature Biotechnology

Bioinformatics and Genomic NetworksComputational Drug Discovery Methods

Cited by 111

Two ancient human genomes reveal Polynesian ancestry among the indigenous Botocudos of Brazil

Malaspinas, A.-S., Lao, O., Schroeder, H., Rasmussen, M., Raghavan, M., Moltke, I., Campos, P. F., Sagredo, F. S., Rasmussen, S., Gonçalves, V. F., et al. (2014) · Current Biology

Forensic and Genetic ResearchGenetic diversity and population structure

Cited by 98

Genome-wide Ancestry Patterns in Rapanui Suggest Pre-European Admixture with Native Americans

Moreno-Mayar, J. V., Rasmussen, S., Seguin-Orlando, A., Rasmussen, M., Liang, M., Flåm, S. T., Lie, B. A., Gilfillan, G. D., Nielsen, R., Thorsby, E., et al. (2014) · Current Biology

Forensic and Genetic ResearchPacific and Southeast Asian Studies

Cited by 74

Gut microbial changes of patients with psychotic and affective disorders: A systematic review

Vindegaard, N., Speyer, H., Nordentoft, M., Rasmussen, S., & Benros, M. E. (2021) · Schizophrenia Research

Gut microbiota and healthTryptophan and brain disorders

Cited by 66

Paleogenomic insights into the red complex bacteria Tannerella forsythia in Pre-Hispanic and Colonial individuals from Mexico

Bravo-Lopez, M., Villa-Islas, V., Rocha Arriaga, C., Villaseñor-Altamirano, A. B., Guzmán-Solís, A., Sandoval-Velasco, M., Wesp, J. K., Alcantara, K., López-Corral, A., Gómez-Valdés, J., et al. (2020) · Philosophical Transactions of the Royal Society B: Biological Sciences

Paleopathology and ancient diseasesOral microbiology and periodontitis research

Cited by 40