Tian, Luyi

The expanding vistas of spatial transcriptomics

Tian, L., Chen, F., & Macosko, E. Z. (2023) · Nature Biotechnology

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 539

Slide-tags enables single-nucleus barcoding for multimodal spatial genomics

Russell, A. J. C., Weir, J. A., Nadaf, N. M., Shabet, M., Kumar, V., Kambhampati, S., Raichur, R., Marrero, G. J., Liu, S., Balderrama, K. S., et al. (2024) · Nature

Single-cell and spatial transcriptomicsGenomics and Chromatin Dynamics

Cited by 225

Comparison of clustering tools in R for medium-sized 10x Genomics single-cell RNA-sequencing data

Freytag, S., Tian, L., Lönnstedt, I., Ng, M., & Bahlo, M. (2018) · F1000Research

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 220

Systematic comparison of sequencing-based spatial transcriptomic methods

You, Y., Fu, Y., Li, L., Zhang, Z., Jia, S., Lu, S., Ren, W., Liu, Y., Xu, Y., Liu, X., et al. (2024) · Nature Methods

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 220

Interconversion between Tumorigenic and Differentiated States in Acute Myeloid Leukemia

McKenzie, M. D., Ghisi, M., Oxley, E. P., Ngo, S., Cimmino, L., Esnault, C., Liu, R., Salmon, J. M., Bell, C. C., Ahmed, N., et al. (2019) · Cell Stem Cell

Acute Myeloid Leukemia ResearchCancer Cells and Metastasis

Cited by 91

A Systematic Comparison of Single-Cell Perturbation Response Prediction Models

Li, L., You, Y., Fu, Y., Liao, W., Fan, X., Lu, S., Cao, Y., Li, B., Ren, W., Kong, J., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory)

Gene Regulatory Network AnalysisSingle-cell and spatial transcriptomics

Cited by 25

SIS-seq, a molecular ‘time machine’, connects single cell fate with gene programs

Tian, L., Schreuder, J., Zalcenstein, D., Tran, J., Kocovski, N., Su, S., Diakumis, P., Bahlo, M., Sargeant, T., Hodgkin, P. D., et al. (2018) · bioRxiv (Cold Spring Harbor Laboratory)

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 10

A systematic comparison of single-cell perturbation response prediction models

Li, L., You, Y., Fu, Y., Liao, W., Fan, X., Lu, S., Cao, Y., Li, B., Ren, W., Kong, J., et al. (2026) · Science Advances

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 1