Li, Hongzhe

Linking long-term dietary patterns with gut microbial enterotypes

Wu, G. D., Chen, J., Hoffmann, C., Bittinger, K., Chen, Y.-Y., Keilbaugh, S. A., Bewtra, M., Knights, D., Walters, W. A., Knight, R., et al. (2011) · Science

Gut microbiota and healthNutritional Studies and Diet

Cited by 6,513

Intestinal microbiota metabolism of l-carnitine, a nutrient in red meat, promotes atherosclerosis

Koeth, R. A., Wang, Z., Levison, B. S., Buffa, J. A., Org, E., Sheehy, B. T., Britt, E. B., Fu, X., Wu, Y., Li, L., et al. (2013) · Nature Medicine

Gut microbiota and healthNutritional Studies and Diet

Cited by 4,386

The human gut virome: inter-individual variation and dynamic response to diet

Minot, S., Sinha, R., Chen, J., Li, H., Keilbaugh, S. A., Wu, G. D., Lewis, J. D., & Bushman, F. D. (2011) · Genome Research

Bacteriophages and microbial interactionsGut microbiota and health

Cited by 935

Correlation between intraluminal oxygen gradient and radial partitioning of intestinal microbiota

Albenberg, L., Esipova, T. V., Judge, C. P., Bittinger, K., Chen, J., Laughlin, A., Grunberg, S., Baldassano, R. N., Lewis, J. D., Li, H., et al. (2014) · Gastroenterology

Gut microbiota and healthOral microbiology and periodontitis research

Cited by 886

Inflammation, antibiotics, and diet as environmental stressors of the gut microbiome in pediatric Crohn's disease

Lewis, J. D., Chen, E. Z., Baldassano, R. N., Otley, A. R., Griffiths, A. M., Lee, D., Bittinger, K., Bailey, A., Friedman, E. S., Hoffmann, C., et al. (2015) · Cell Host & Microbe

Gut microbiota and healthInflammatory Bowel Disease

Cited by 823

Archaea and fungi of the human gut microbiome: correlations with diet and bacterial residents

Hoffmann, C., Dollive, S., Grunberg, S., Chen, J., Li, H., Wu, G. D., Lewis, J. D., & Bushman, F. D. (2013) · PLoS ONE

Gut microbiota and healthGastrointestinal motility and disorders

Cited by 808

Comparative metabolomics in vegans and omnivores reveal constraints on diet-dependent gut microbiota metabolite production

Wu, G. D., Compher, C., Chen, E. Z., Smith, S. A., Shah, R. D., Bittinger, K., Chehoud, C., Albenberg, L. G., Nessel, L., Gilroy, E., et al. (2016) · Gut

Gut microbiota and healthNutritional Studies and Diet

Cited by 512

Disordered Microbial Communities in the Upper Respiratory Tract of Cigarette Smokers

Charlson, E. S., Chen, J., Custers-Allen, R., Bittinger, K., Li, H., Sinha, R., Hwang, J., Bushman, F. D., & Collman, R. G. (2010) · PLoS ONE

Oral microbiology and periodontitis researchGut microbiota and health

Cited by 437

Testing in Microbiome-Profiling Studies with MiRKAT, the Microbiome Regression-Based Kernel Association Test

Zhao, N., Chen, J., Carroll, I. M., Ringel-Kulka, T., Epstein, M. P., Zhou, H., Zhou, J. J., Ringel, Y., Li, H., & Wu, M. C. (2015) · The American Journal of Human Genetics

Gut microbiota and healthGenetic Associations and Epidemiology

Cited by 306

A two-part mixed-effects model for analyzing longitudinal microbiome compositional data

Chen, E. Z., & Li, H. (2016) · Bioinformatics

Gut microbiota and healthStatistical Methods and Bayesian Inference

Cited by 234

FXR-dependent modulation of the human small intestinal microbiome by the bile acid derivative obeticholic acid

Friedman, E. S., Li, Y., Shen, T.-C. D., Jiang, J., Chau, L., Adorini, L., Babakhani, F., Edwards, J., Shapiro, D., Zhao, C., et al. (2018) · Gastroenterology

Gut microbiota and healthDrug Transport and Resistance Mechanisms

Cited by 149

A Logistic Normal Multinomial Regression Model for Microbiome Compositional Data Analysis

Xia, F., Chen, J., Fung, W. K., & Li, H. (2013) · Biometrics

Statistical Methods and InferenceGut microbiota and health

Cited by 144

Sociability Deficits and Altered Amygdala Circuits in Mice Lacking Pcdh10, an Autism Associated Gene

Schoch, H., Kreibich, A. S., Ferri, S. L., White, R. S., Bohorquez, D., Banerjee, A., Port, R. G., Dow, H. C., Cordero, L., Pallathra, A. A., et al. (2017) · Biological Psychiatry

Autism Spectrum Disorder ResearchGenetics and Neurodevelopmental Disorders

Cited by 92

Plasma proteomics identifies a ‘chemokine storm’ in idiopathic multicentric Castleman disease

Pierson, S. K., Stonestrom, A. J., Shilling, D., Ruth, J., Nabel, C. S., Singh, A., Ren, Y., Stone, K., Li, H., van Rhee, F., et al. (2018) · American Journal of Hematology

Viral-associated cancers and disordersIgG4-Related and Inflammatory Diseases

Cited by 90

Co-expression networks: graph properties and topological comparisons

Xulvi-Brunet, R., & Li, H. (2010) · Bioinformatics

Bioinformatics and Genomic NetworksGene Regulatory Network Analysis

Cited by 77

Low sociability is associated with reduced size of the corpus callosum in the BALB/cJ inbred mouse strain

Fairless, A. H., Dow, H. C., Toledo, M. M., Malkus, K. A., Edelmann, M., Li, H., Talbot, K., Arnold, S. E., Abel, T., & Brodkin, E. S. (2008) · Brain Research

Autism Spectrum Disorder ResearchGenetics and Neurodevelopmental Disorders

Cited by 69

Treatment of Patients with Toxic Multinodular Goiter

ERICKSON, D., GHARIB, H., LI, H., & VAN HEERDEN, J. A. (1998) · Thyroid

Thyroid and Parathyroid SurgeryThyroid Disorders and Treatments

Cited by 64

More powerful genetic association testing via a new statistical framework for integrative genomics

Zhao, S. D., Cai, T. T., & Li, H. (2014) · Biometrics

Genetic Associations and EpidemiologyGenetic Mapping and Diversity in Plants and Animals

Cited by 31