Iwasaki, Wataru

SonicParanoid: fast, accurate and easy orthology inference

Cosentino, S., & Iwasaki, W. (2019) · Bioinformatics

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 134

SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models

Cosentino, S., & Iwasaki, W. (2023) · Genome biology

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 50

SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models

Cosentino, S., Sriswasdi, S., & Iwasaki, W. (2024) · Genome Biology

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 50

Ten Years of Collaborative Progress in the Quest for Orthologs

Linard, B., Ebersberger, I., McGlynn, S. E., Glover, N., Mochizuki, T., Patricio, M., Lecompte, O., Nevers, Y., Thomas, P. D., Gabaldón, T., et al. (2021) · Molecular Biology and Evolution

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 45

Quest for Orthologs in the Era of Biodiversity Genomics

Langschied, F., Bordin, N., Cosentino, S., Fuentes-Palacios, D., Glover, N., Hiller, M., Hu, Y., Huerta-Cepas, J., Coelho, L. P., Iwasaki, W., et al. (2024) · Genome Biology and Evolution

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 26

Inverse Potts model improves accuracy of phylogenetic profiling

Fukunaga, T., & Iwasaki, W. (2022) · Bioinformatics

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 8

CORGIAS: identifying correlated gene pairs by considering evolutionary history in a large-scale prokaryotic genome dataset

Nishimura, Y., Omae, K., Tominaga, K., & Iwasaki, W. (2025) · NAR Genomics and Bioinformatics

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 1

CORGIAS: identifying correlated gene pairs by considering evolutionary history in a large-scale prokaryotic genome dataset

Nishimura, Y., Omae, K., Tominaga, K., & Iwasaki, W. (2025) · NAR Genomics and Bioinformatics

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 1