Statistical Analysis and Modelling of Spatial Point Patterns

Abstract

Preface. List of Examples. 1. Introduction. 1.1 Point process statistics. 1.2 Examples of point process data. 1.2.1 A pattern of amacrine cells. 1.2.2 Gold particles. 1.2.3 A pattern of Western Australian plants. 1.2.4 Waterstriders. 1.2.5 A sample of concrete. 1.3 Historical notes. 1.3.1 Determination of number of trees in a forest. 1.3.2 Number of blood particles in a sample. 1.3.3 Patterns of points in plant communities. 1.3.4 Formulating the power law for the pair correlation function for galaxies. 1.4 Sampling and data collection. 1.4.1 General remarks. 1.4.2 Choosing an appropriate study area. 1.4.3 Data collection. 1.5 Fundamentals of the theory of point processes. 1.6 Stationarity and isotropy. 1.6.1 Model approach and design approach. 1.6.2 Finite and infinite point processes. 1.6.3 Stationarity and isotropy. 1.6.4 Ergodicity. 1.7 Summary characteristics for point processes. 1.7.1 Numerical summary characteristics. 1.7.2 Functional summary characteristics. 1.8 Secondary structures of point processes. 1.8.1 Introduction. 1.8.2 Random sets. 1.8.3 Random fields. 1.8.4 Tessellations. 1.8.5 Neighbour networks or graphs. 1.9 Simulation of point processes. 2. The Homogeneous Poisson point process. 2.1 Introduction. 2.2 The binomial point process. 2.2.1 Introduction. 2.2.2 Basic properties. 2.2.3 The periodic binomial process. 2.2.4 Simulation of the binomial process. 2.3 The homogeneous Poisson point process. 2.3.1 Introduction. 2.3.2 Basic properties. 2.3.3 Characterisations of the homogeneous Poisson process. 2.4 Simulation of a homogeneous Poisson process. 2.5 Model characteristics. 2.5.1 Moments and moment measures. 2.5.2 The Palm distribution of a homogeneous Poisson process. 2.5.3 Summary characteristics of the homogeneous Poisson process. 2.6 Estimating the intensity. 2.7 Testing complete spatial randomness. 2.7.1 Introduction. 2.7.2 Quadrat counts. 2.7.3 Distance methods. 2.7.4 The J-test. 2.7.5 Two index-based tests. 2.7.6 Discrepancy tests. 2.7.7 The L-test. 2.7.8 Other tests and recommendations. 3. Finite point processes. 3.1 Introduction. 3.2 Distributions of numbers of points. 3.2.1 The binomial distribution. 3.2.2 The Poisson distribution. 3.2.3 Compound distributions. 3.2.4 Generalised distributions. 3.3 Intensity functions and their estimation. 3.3.1 Parametric statistics for the intensity function. 3.3.2 Non-parametric estimation of the intensity function. 3.3.3 Estimating the point density distribution function. 3.4 Inhomogeneous Poisson process and finite Cox process. 3.4.1 The inhomogeneous Poisson process. 3.4.2 The finite Cox process. 3.5 Summary characteristics for finite point processes. 3.5.1 Nearest-neighbour distances. 3.5.2 Dilation function. 3.5.3 Graph-theoretic statistics. 3.5.4 Second-order characteristics. 3.6 Finite Gibbs processes. 3.6.1 Introduction. 3.6.2 Gibbs processes with fixed number of points. 3.6.3 Gibbs processes with a random number of points. 3.6.4 Second-order summary characteristics of finite Gibbs processes. 3.6.5 Further discussion. 3.6.6 Statistical inference for finite Gibbs processes. 4. Stationary point processes. 4.1 Basic definitions and notation. 4.2 Summary characteristics for stationary point processes. 4.2.1 Introduction. 4.2.2 Edge-correction methods. 4.2.3 The intensity lambda. 4.2.4 Indices as summary characteristics. 4.2.5 Empty-space statistics and other morphological summaries. 4.2.6 The nearest-neighbour distance distribution function. 4.2.7 The J-function. 4.3 Second-order characteristics. 4.3.1 The three functions: K, L and g. 4.3.2 Theoretical foundations of second-order characteristics. 4.3.3 Estimators of the second-order characteristics. 4.3.4 Interpretation of pair correlation functions. 4.4 Higher-order and topological characteristics. 4.4.1 Introduction. 4.4.2 Third-order characteristics. 4.4.3 Delaunay tessellation characteristics. 4.4.4 The connectivity function. 4.5 Orientation analysis for stationary point processes. 4.5.1 Introduction. 4.5.2 Nearest-neighbour orientation distribution. 4.5.3 Second-order orientation analysis. 4.6 Outliers, gaps and residuals. 4.6.1 Introduction. 4.6.2 Simple outlier detection. 4.6.3 Simple gap detection. 4.6.4 Model-based outliers. 4.6.5 Residuals. 4.7 Replicated patterns. 4.7.1 Introduction. 4.7.2 Aggregation recipes. 4.8 Choosing appropriate observation windows. 4.8.1 General ideas. 4.8.2 Representative windows. 4.9 Multivariate analysis of series of point patterns. 4.10 Summary characteristics for the non-stationary case. 4.10.1 Formal application of stationary characteristics and estimators. 4.10.2 Intensity reweighting. 4.10.3 Local rescaling. 5. Stationary marked point processes. 5.1 Basic definitions and notation. 5.1.1 Introduction. 5.1.2 Marks and their properties. 5.1.3 Marking models. 5.1.4 Stationarity. 5.1.5 First-order characteristics. 5.1.6 Mark-sum measure. 5.1.7 Palm distribution. 5.2 Summary characteristics. 5.2.1 Introduction. 5.2.2 Intensity and mark-sum intensity. 5.2.3 M