The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
SWISS‐MODEL and the Swiss‐Pdb Viewer: An environment for comparative protein modeling
Abstract
Comparative protein modeling is increasingly gaining interest since it is of great assistance during the rational design of mutagenesis experiments. The availability of this method, and the resulting models, has however been restricted by the availability of expensive computer hardware and software. To overcome these limitations, we have developed an environment for comparative protein modeling that consists of SWISS‐MODEL, a server for automated comparative protein modeling and of the SWISS‐PdbViewer, a sequence to structure workbench. The Swiss‐PdbViewer not only acts as a client for SWISS‐MODEL, but also provides a large selection of structure analysis and display tools. In addition, we provide the SWISS‐MODEL Repository, a database containing more than 3500 automatically generated protein models. By making such tools freely available to the scientific community, we hope to increase the use of protein structures and models in the process of experiment design.
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Basic local alignment search tool
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669
The relation between the divergence of sequence and structure in proteins.
Chothia, C., & Lesk, A. M. (1986) · The EMBO Journal · doi:10.1002/j.1460-2075.1986.tb04288.x · Cited by 2,458
Research works printed but not linked: 32
- 10.1093/nar/24.1.21 · DOI · Paper page
- 10.1016/S0022-2836(77)80200-3 · DOI
- 10.1038/nbt0795-658 · DOI · Paper page
- 10.1042/bst0240274 · DOI · Paper page
- 10.1002/elps.1150180326 · DOI
- 10.1002/pro.5560021103 · DOI
- 10.1016/S0022-2836(05)80360-2 · DOI · Paper page
- 10.1073/pnas.85.8.2444 · DOI · Paper page
- 10.1016/0196-8858(91)90017-D · DOI · Paper page
- 10.1038/326347a0 · DOI · Paper page
- 10.1002/j.1460-2075.1986.tb04287.x · DOI · Paper page
- 10.1002/prot.340070404 · DOI
- 10.1016/0022-2836(87)90358-5 · DOI
- 10.1038/356083a0 · DOI
- 10.1002/prot.340170404 · DOI
- 10.1002/jcc.540040211 · DOI · Paper page
- Peitsch M. C., 1996, Receptors Channels, 4, 161
- 10.1016/S0006-3495(95)80112-8 · DOI
- Guex N., 1996, Protein Data Bank Quarterly Newsletter, 77, 7
- 10.1021/ja00315a051 · DOI · Paper page
- 10.1002/prot.340120407 · DOI
- 10.1016/0022-2836(70)90173-7 · DOI
- 10.1016/0968-0004(94)90153-8 · DOI · Paper page
- 10.1021/bi00440a051 · DOI
- 10.1021/bi00066a010 · DOI
- 10.1126/science.3201242 · DOI · Paper page
- 10.1042/bst0170301 · DOI
- 10.1007/978-94-011-1472-1_128 · DOI
- 10.1021/bi00174a014 · DOI
- 10.1016/0022-2836(76)90290-4 · DOI
- 10.1021/bi00124a006 · DOI · Paper page
- 10.1002/prot.340230402 · DOI
Cited by
Berman, H. M. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.1.235 · Cited by 40,196
Visse, R., & Nagase, H. (2003) · Circulation Research · doi:10.1161/01.res.0000070112.80711.3d · Cited by 4,575
The FoldX web server: an online force field
Schymkowitz, J., Borg, J., Stricher, F., Nys, R., Rousseau, F., & Serrano, L. (2005) · Nucleic Acids Research · doi:10.1093/nar/gki387 · Cited by 2,759
“Although the pdb-reader in FoldX is continually extended to handle more exceptions, standardizing the format of anomalous files most often solves the problem—this can easily be achieved by opening and saving the file using Swiss PDB viewer (14) or WHATIF (15).”
MethodMechanism of Human SIRT1 Activation by Resveratrol
Borra, M. T., Smith, B. C., & Denu, J. M. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m501250200 · Cited by 1,065
An improved zinc-finger nuclease architecture for highly specific genome editing
Miller, J. C., Holmes, M. C., Wang, J., Guschin, D. Y., Lee, Y.-L., Rupniewski, I., Beausejour, C. M., Waite, A. J., Wang, N. S., Kim, K. A., et al. (2007) · Nature Biotechnology · doi:10.1038/nbt1319 · Cited by 1,051
Metadata
- Authors
- Guex, N., & Peitsch, M. C.
- Venue
- ELECTROPHORESIS
- Publisher
- Wiley
- Published
- 1997-01
- Volume
- 18
- Issue
- 15
- Pages
- 2714-2723
- ISSN
- 0173-0835 (ISSN-L)
- 1522-2683
- OpenAlex
- W2015642465
- Cited by
- 11,241
- References
- 2
- FWCI
- 25.76
- Type
- journal article
- Language
- en
- Open access
- closed
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- Guex, N., & Peitsch, M. C. (1997). SWISS‐MODEL and the Swiss‐Pdb Viewer: An environment for comparative protein modeling. ELECTROPHORESIS. https://doi.org/10.1002/elps.1150181505
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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