Origin and evolution of the genetic code: The universal enigma

Cited by (392)

Items 201–300 of 392

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2. How to ‘find’ an error minimized genetic code: neutral emergence as an alternative to direct Darwinian selection for evolutionary optimization
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5. Semiopoesis: Formation of Meaning in Molecular Genetics and Biosemiotics
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6. Computational Analysis of Genetic Code Variations Optimized for the Robustness against Point Mutations with Wobble-like Effects
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7. Are Proposed Early Genetic Codes Capable of Encoding Viable Proteins?
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8. p-Adic Side of the Genetic Code and the Genome
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9. The Evolution of Life Is a Road Paved with the DNA Quadruplet Symmetry and the Supersymmetry Genetic Code
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10. From sequence to information
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11. Opinion: The Key Steps in the Origin of Life to the Formation of the Eukaryotic Cell
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12. Comprehensive Analysis of Codon Usage Bias in Human Papillomavirus Type 51
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13. Two fundamental questions about protein evolution
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14. On the origins of life: A molecular and a cellular journey driven by genentropy
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15. From Matter to Form: the Evolution of the Genetic Code as Semio-Poiesis
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16. The Mutational Robustness of the Genetic Code and Codon Usage in Environmental Context: A Non-Extremophilic Preference?
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17. Standard genetic code: p-adic modelling, nucleon balances and selfsimilarity
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18. Analysis of genomic tRNA revealed presence of novel genomic features in cyanobacterial tRNA
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19. The Graph, Geometry and Symmetries of the Genetic Code with Hamming Metric
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20. 'The Frozen Accident' as an Evolutionary Adaptation: A Rate Distortion Theory Perspective on the Dynamics and Symmetries of Genetic Coding Mechanisms
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21. Ribonucleic acid (RNA) biosynthesis in human cancer
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22. Space ethics to test directed panspermia
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23. The genetic law of the minimum
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24. Origin of life: β‐sheet amyloid conformers as the primordial functional polymers on the early Earth and their role in the emergence of complex dynamic networks
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25. Generation of genetic codes with 2-adic codon algebra and adaptive dynamics
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26. AAV Capsid Modification and Its Influence on Viral Protein Stoichiometry and Packaging Fitness: Current Understandings and Future Direction
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27. Traces of a Primitive RNA Ring in Current Genomes
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28. Local stability and evolution of the genetic code
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29. Investigation of genetic code optimality for overlapping protein coding sequences
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30. Hypothesis of Lithocoding: Origin of the Genetic Code as a “Double Jigsaw Puzzle” of Nucleobase-Containing Molecules and Amino Acids Assembled by Sequential Filling of Apatite Mineral Cellules
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31. Combinatorial Fusion Rules to Describe Codon Assignment in the Standard Genetic Code
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32. Models of genetic code structure evolution with variable number of coded labels
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33. Theoretical modeling of the terahertz spectrum of l -tyrosine leads to experimental verification of previously unobserved vibrational mode
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34. Fast and scalable protein motif sequence clustering based on Hadoop framework
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35. Did Gene Expression Co-evolve with Gene Replication?
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36. Optimality properties of a proposed precursor to the genetic code
    Thomas Butler, Nigel D. Goldenfeld · 2009 · Physical Review E
37. Proving universal common ancestry with similar sequences
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38. From Phenols to Proteins: One‐Pot Biosynthesis and Genetic Encoding of Chalcogen‐Containing Tyrosine Analogues
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39. The evolution and exploration of intrinsically disordered and phase-separated protein states
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40. Life is chemistry plus information
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41. Probable relationship between partitions of the set of codons and the origin of the genetic code
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42. Two RNA Worlds: Toward the Origin of Replication, Genes, Recombination, and Repair
    Dirk‐Henner Lankenau · 2011 · Springer eBooks
43. Redoxbiochemie des genetischen Codes
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44. Predicting Taxonomic Identity and Genetic Composition of Codon Usage Bias Levels Using Deep Learning Models
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45. Examining the Effects of Temperature on the Evolution of Bacterial tRNA Pools
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46. Origin of Type II tRNA Variable Loops, Aminoacyl-tRNA Synthetase Allostery from Distal Determinants, and Diversification of Life
    Lei Lei, Zachary Frome Burton · 2024 · DNA
47. Reduced Amino Acid Substitution Matrices Find Traces of Ancient Coding Alphabets in Modern Day Proteins
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48. Genomic Rearrangements and Evolution
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49. Mutuality in Discrete and Compositional Information: Perspectives for Synthetic Genetic Codes
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50. The most probable number of blocks for the partitions of the set of codons could have determined the number of standard amino acids
    Dino G. Salinas, Mauricio O. Gallardo, Manuel Isaías Osorio · 2012 · Biosystems
51. Cross-species conservation of complementary amino acid-ribonucleobase interactions and their potential for ribosome-free encoding
    John G. D. Cannon, Rachel M. Sherman, Victoria M.-Y. Wang, Grace A. Newman · 2015 · Scientific Reports
52. Role of Water for Life
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53. Chemical arbitrariness and the causal role of molecular adapters
    Oliver M. Lean · 2019 · Studies in History and Philosophy of Science Part C Studies in History and Philosophy of Biological and Biomedical Sciences
54. Direct interplay between stereochemistry and conformational preferences in aminoacylated oligoribonucleotides
    Anton A. Polyansky, Mathias Kreuter, John D. Sutherland, Bojan Žagrović · 2019 · Nucleic Acids Research
55. Modeling the Genetic Code: p-Adic Approach
    Branko G Dragovich, N.Ž. Mišić · 2020 · Springer eBooks
56. Application of Biomedical Molecular Techniques in Environmental Sciences
    Salina M Torres, Yvonne T. Dailey, Kirsten A. White · 2021 · Springer eBooks
57. Arising information regularities in an observer
    Vladimir S. Lerner · 2013 · arXiv (Cornell University)
58. The geometry of chromatin
    Subhash C. Kak · 2023
59. Comparative genomics of thermosynechococcaceae and thermostichaceae: insights into codon usage bias
    Qiao-Hui Mou, Zhe Hu, Jing Zhang, Maurycy Daroch, Jie Tang · 2025 · Acta Biochimica Polonica
60. The Origin of Life in the Early Continental Crust: A Comprehensive Model
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61. Key Invariants in the Evolution of Sociality Across Taxa
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62. From searching for extraterrestrial biosignatures to exploring the origins of life: A prebiotic chemistry perspective
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63. Nucleosome positioning shapes cryptic antisense transcription
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64. The proteomic origin of the genetic code
    Gustavo Caetano‐Anollés · 2026 · Expert Review of Proteomics
65. Intrinsic bias of the genetic code shapes the folding and stability landscapes of microproteins
    Yabo Guo, Ti Qin, Jiancheng Luo, Qiannan Pan, Runguo Shu, Ruiyang Guo, Jiajia Qian, Chenyang Xu, Jiawei Wang, Ziyi Wang et al. · 2026 · Molecular Cell
66. Rethinking the Last Universal Common Ancestor of Life: Network Convergence and the Root of the Tree
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67. On the representation of the genetic code by the attractors of 2-adic function
    Ekaterina Yurova Axelsson · 2015 · Physica Scripta
68. Universal dynamical function behind all genetic codes: P -adic attractor dynamical model
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69. Chemical Evolution of Life on Earth
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70. Life is translation
    Bojan Žagrović · 2014 · RNA Biology
71. Positional Information Storage in Sequence Patterns
    Alexey A. Shadrin, Andrei Grigoriev, Dmitri Parkhomchuk · 2013 · Computational Molecular Bioscience
72. Energy, Information, and The Origins of Life
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73. The Deciphering of the Genetic Code
    Michael Fry · 2016 · Elsevier eBooks
74. A model of k-mer surprisal to quantify local sequence information content surrounding splice regions
    Sam Humphrey, Alastair R. W. Kerr, Magnus Rattray, Caroline Dive, Crispin J. Miller · 2020 · PeerJ
75. Nucleotide tetramers TCGA and CTAG: viral DNA and the genetic code (hypothesis)
    Felix P. Filatov · 2022 · Journal of microbiology epidemiology immunobiology
76. The spiderweb of error-detecting codes in the genetic information
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77. Genetic variation within the Daphnia pulex genome
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78. A formal model of molecular codes with respect to chemical reaction networks
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79. Invariants of Frameshifted Variants
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80. Genetic code as the unity of chemism and semiosis
    Miloje M. Rakočević · 2022
81. Enzymic recognition of amino acids drove the evolution of primordial genetic codes
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82. Protein evolvability under rewired genetic codes
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83. From initial RNA encoding to the Standard Genetic Code
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84. First report of stop codon reassignment to tryptophan in members of the bacterial phylum Actinomycetota
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85. El impacto de la teoría evolutiva en nuestra concepción de la naturaleza
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86. Modeling the origin, evolution, and functioning of the genetic code
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87. Genetic Code-Locking Confers Stable Virus Resistance to a Recoded Organism
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88. Molecular Complexity Constrained Early Amino Acid Recruitment into the Genetic Code
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89. Gene sharing has stabilised the genetic code
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90. From Phenols to Proteins: One‐Pot Biosynthesis and Genetic Encoding of Chalcogen‐Containing Tyrosine Analogues
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91. Selection for growth drives the emergence of genetic heredity in protocells
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92. Integrative Structural Bioinformatics and Molecular Dynamics Analyses of Synaptic Vesicle Proteins and Their Water-Soluble QTY-Variants Reveal Membrane Constraints and Evolutionary Coupling of T ⇔ V
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93. Experimental verification of the error minimization theory using non-standard genetic codes constructed in vitro
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94. Stop codon reassignment to tryptophan in members of the bacterial phylum Actinomycetota
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95. Robust error-minimization in the genetic code across physicochemical metrics and variant codes: A graph-theoretic analysis in GF(2)6
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96. Isoelectric point stabilization and protein mass compression are associated with antimicrobial resistance in the genus Acinetobacter
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97. Self-Evolvability for Biosystems
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98. Translation tables: A genetic code in a evolutionary algorithm
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99. Woese on the received view of evolution
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100. A Model for the Emergence of Coded Life
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