The DOI matches its Crossref record; 56 of the 56 references it cites were found in a registry or an index.
RAD26, the functional S. cerevisiae homolog of the Cockayne syndrome B gene ERCC6.
Open accessAbstract
Transcription-coupled repair (TCR) is a universal sub-pathway of the nucleotide excision repair (NER) system that is limited to the transcribed strand of active structural genes. It accomplishes the preferential elimination of transcription-blocking DNA lesions and permits rapid resumption of the vital process of transcription. A defect in TCR is responsible for the rare hereditary disorder Cockayne syndrome (CS). Recently we found that mutations in the ERCC6 repair gene, encoding a putative helicase, underly the repair defect of CS complementation group B. Here we report the cloning and characterization of the Saccharomyces cerevisiae homolog of CSB/ERCC6, which we designate RAD26. A rad26 disruption mutant appears viable and grows normally, indicating that the gene does not have an essential function. In analogy with CS, preferential repair of UV-induced cyclobutane pyrimidine dimers in the transcribed strand of the active RBP2 gene is severely impaired. Surprisingly, in contrast to the human CS mutant, yeast RAD26 disruption does not induce any UV-, cisPt- or X-ray sensitivity, explaining why it was not isolated as a mutant before. Recovery of growth after UV exposure was somewhat delayed in rad26. These findings suggest that TCR in lower eukaryotes is not very important for cell survival and that the global genome repair pathway of NER is the major determinant of cellular resistance to genotoxicity.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The text we found for this paper looks like another document, so the self-check wasn’t run.
Citations
Cites
Basic local alignment search tool
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669
Multiple sequence alignment with hierarchical clustering.
Corpet, F. (1988) · Nucleic Acids Research · doi:10.1093/nar/16.22.10881 · Cited by 5,575
How eukaryotic transcriptional activators work
Ptashne, M. (1988) · Nature · doi:10.1038/335683a0 · Cited by 1,828
Robbins, J., Dilwortht, S. M., Laskey, R. A., & Dingwall, C. (1991) · Cell · doi:10.1016/0092-8674(91)90245-t · Cited by 1,490
MELLON, I. (1987) · Cell · doi:10.1016/0092-8674(87)90151-6 · Cited by 1,228
Tamkun, J. W., Deuring, R., Scott, M. P., Kissinger, M., Pattatucci, A. M. L., Kaufman, T. C., & Kennison, J. A. (1992) · Cell · doi:10.1016/0092-8674(92)90191-e · Cited by 988
Sancar, A., & Sancar, G. B. (1988) · Annual Review of Biochemistry · doi:10.1146/annurev.bi.57.070188.000333 · Cited by 815
Cockayne syndrome: Review of 140 cases
Nance, M. A., & Berry, S. A. (1992) · American Journal of Medical Genetics · doi:10.1002/ajmg.1320420115 · Cited by 806
DNA Repair Helicase: a Component of BTF2 (TFIIH) Basic Transcription Factor
Schaeffer, L., Roy, R., Humbert, S., Moncollin, V., Vermeulen, W., Hoeijmakers, J. H. J., Chambon, P., & Egly, J. (1993) · Science · doi:10.1126/science.8465201 · Cited by 794
Self-citation
Cited by
Sorted by citations
Items 201–244 of 244
Transcription-coupled DNA repair in yeast transcription factor IIE (TFIIE) mutants
Lommel, L. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.3.835 · Cited by 6
Gong, W., Holmberg, H., Lu, C., Huang, M., & Li, S. (2024) · Nucleic Acids Research · doi:10.1093/nar/gkae286 · Cited by 5
Guintini, L., Paillé, A., Graf, M., Luke, B., Wellinger, R. J., & Conconi, A. (2022) · PLoS Genetics · doi:10.1371/journal.pgen.1010167 · Cited by 4
The “Dutch DNA Repair Group”, in retrospect
Bootsma, D. (2001) · Mutation Research/DNA Repair · doi:10.1016/s0921-8777(00)00080-x · Cited by 5
Self-citationPeyresaubes, F., Zeledon, C., Guintini, L., Charton, R., Muguet, A., & Conconi, A. (2016) · Photochemistry and Photobiology · doi:10.1111/php.12690 · Cited by 5
Transcription-Coupled and Global Genome Nucleotide Excision Repair
Verhage, R. A., Tijsterman, M., van de Putte, P., & Brouwer, J. (1998) · Nucleic acids and molecular biology · doi:10.1007/978-3-642-48770-5_8 · Cited by 5
Self-citationAl-Moghrabi, N. M., Al-Sharif, I. S., & Aboussekhra, A. (2009) · Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis · doi:10.1016/j.mrfmmm.2009.01.008 · Cited by 4
Dissecting the interstrand crosslink DNA repair system of Trypanosoma cruzi
Martinez, M. Z., Olmo, F., Taylor, M. C., Caudron, F., & Wilkinson, S. R. (2023) · DNA repair · doi:10.1016/j.dnarep.2023.103485 · Cited by 4
Single-molecule studies of helicases and translocases in prokaryotic genome-maintenance pathways
Whinn, K. S., van Oijen, A. M., & Ghodke, H. B. (2021) · DNA repair · doi:10.1016/j.dnarep.2021.103229 · Cited by 3
Rpb7 represses transcription-coupled nucleotide excision repair
Gong, W., & Li, S. (2023) · Journal of Biological Chemistry · doi:10.1016/j.jbc.2023.104969 · Cited by 3
Transcription as source of genetic heterogeneity in budding yeast
Piguet, B., & Houseley, J. M. (2024) · Yeast · doi:10.1002/yea.3926 · Cited by 2
Wang, J., Sarker, A. H., Cooper, P. K., & Volkert, M. R. (2004) · Molecular and Cellular Biology · doi:10.1128/mcb.24.13.6084-6093.2004 · Cited by 90
Gaillard, H., Ciudad, T., Aguilera, A., & Wellinger, R. E. (2024) · PLoS Genetics · doi:10.1371/journal.pgen.1011300 · Cited by 3
Regulation of active genome integrity and expression by Rad26p
Malik, S., & Bhaumik, S. R. (2014) · Nucleus · doi:10.4161/nucl.36230 · Cited by 2
TRAVERS, A. A., & Owen‐Hughes, T. (2004) · New comprehensive biochemistry · doi:10.1016/s0167-7306(03)39016-7 · Cited by 2
Paillé, A., Peyresaubes, F., Gardrat, T., Zeledon, C., & Conconi, A. (2023) · Biochemistry · doi:10.1021/acs.biochem.3c00128 · Cited by 2
Gopaul, D., Wilkes, C. D., Goldar, A., Aiach, N. G., Barrault, M., Novikova, E., & Soutourina, J. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.10.20.465181 · Cited by 3
Roy, S. G., Das, D., Chowdhury, D., Smerdon, M. J., & Chaudhuri, R. N. (2013) · PLoS ONE · doi:10.1371/annotation/0625b456-da2e-44bd-b620-39796216cc2a · Cited by 2
Gopaul, D., Wilkes, C. D., Goldar, A., Aiach, N. G., Barrault, M., Novikova, E., & Soutourina, J. (2022) · Genome Research · doi:10.1101/gr.276371.121 · Cited by 2
Illuminating genome repair by photolyase
Laughery, M. F., & Wyrick, J. J. (2025) · Photochemistry and Photobiology · doi:10.1111/php.70047 · Cited by 1
Paillé, A., Charton, R., Dholandre, Q., & Conconi, A. (2021) · Photochemistry and Photobiology · doi:10.1111/php.13580 · Cited by 1
Iwr1 facilitates RNA polymerase II dynamics during transcription elongation
Gómez‐Navarro, N., Peiró-Chova, L., & Estruch, F. (2017) · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms · doi:10.1016/j.bbagrm.2017.02.009 · Cited by 1
An Assay for Studying Ubiquitylation of RNA Polymerase II and Other Proteins in Crude Yeast Extracts
Reid, J., & Svejstrup, J. Q. (2006) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(06)08016-5 · Cited by 1
Nucleotide Excision Repair in Yeast: Recent Progress and Implications
Friedberg, E. C., Feaver, W. J., Huang, W., Reagan, M. S., Ramos, W., Rodriguez, K. A., Reed, S. H., Tomkinson, A. E., Wei, S., & You, Z. (1998) · Nucleic acids and molecular biology · doi:10.1007/978-3-642-48770-5_6 · Cited by 1
Heterogeneity of Nucleotide Excision Repair in Eukaryotic Genomes
(2014) · ASM Press eBooks · doi:10.1128/9781555816704.ch10 · Cited by 1
Gaillard, H., Ciudad, T., Aguilera, A., & Wellinger, R. E. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.05.13.593813 · Cited by 1
New factors in nucleotide excision repair : a study in saccharomyces cerevisiae
den Dulk, B. (2008) · Leiden Repository (Leiden University)
Def1 promotes polymerase exchange at stalled replication forks upon DNA damage
Daraba, A. (2014) · SZTE Repository of Dissertations (University of Szeged) · doi:10.14232/phd.2054
DNA instability, telomere dynamics, and cell transformation
Reis, R. J. S., & Shammas, M. A. (2001) · Advances in cell aging and gerontology · doi:10.1016/s1566-3124(01)04031-7
The Cockayne syndrome B protein: involvement in transcription-coupled DNA repair
van Gool, A. J. (1996)
The Role of PC4 in Oxidative Stress: A Dissertation
Yu, L. (2011) · eScholarship@UMassChan · doi:10.13028/q0af-rm56
Transcription and Genomic Integrity
Poisson, J. M., Chen, Y., & Sánchez, Y. (2007) · Springer eBooks · doi:10.1007/978-0-387-40049-5_25
The current status of nucleotide excision repair in the yeast Saccharomyces cerevisiae
Friedberg, E. C., Feaver, W. J., Huang, W., Reagan, M. S., Reed, S. H., You, Z., Wei, S., Rodriguez, K. A., Talamantez, J. L., & Tomkinson, A. E. (1999)
RNA polymerase II during transcript elongation : dealing with DNA damage and staying phosphorylated
Kong, S. E. (2001) · UCL Discovery (University College London)
The roles of transcription factors in Nucleotide excision repair in yeast
Ding, B. (2010) · Louisiana State University · doi:10.31390/gradschool_dissertations.3791
DNA Repair in Actively Transcribed Genes in Eukaryotic Cells
Tang, M. (2005) · CRC Press eBooks · doi:10.1201/9780849352683.ch9
Human Premature Aging Disorders and Dysfunction of DNA Repair
Ahn, B., & Bohr, V. A. (2006) · Springer eBooks · doi:10.1007/0-387-36802-7_1
Study of the molecular mechanisms linking transcription and DNA repair in Saccharomyces cerevisiae
Gopaul, D. (2018) · theses.fr (ABES) · doi:10.70675/cf586e1bz5dafz40b7zb5c9z33319e0b967b
Development of a new mutation monitoring system in the yeast Saccharomyces cerevisiae
Sipos, E. H. (2021) · theses.fr (ABES) · doi:10.70675/863bfb65z9db2z4e87z8304zdcb028419729
Metadata
- Authors
- van Gool, A. J., Verhage, R., Swagemakers, S. M., van de Putte, P., Brouwer, J., Troelstra, C., Bootsma, D., & Hoeijmakers, J. H.
- Affiliations
- Erasmus University Rotterdam (NL)
- ORCID
- Hoeijmakers, J.H.
- Venue
- The EMBO Journal
- Published
- 1994-11-01
- Volume
- 13
- Issue
- 22
- Pages
- 5361-5369
- ISSN
- 0261-4189 (ISSN-L)
- 1460-2075
- PMC
- PMC395493
- OpenAlex
- W2112652171
- Cited by
- 246
- References
- 56
- Citations by year
- 2025: 2 · 2024: 5 · 2023: 5 · 2022: 6 · 2021: 8 · 2020: 2 · 2019: 1 · 2018: 3 · 2017: 4 · 2016: 8 · 2015: 3 · 2014: 7 · 2013: 7 · 2012: 4
- FWCI
- 6.46
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- The EMBO Journal (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- RePub (Erasmus University Rotterdam) (submittedVersion, other-oa)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Fungal and yeast genetics research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Nuclear Structure and Function
- Keywords
- Rad26, ERCC6, Cockayne syndrome B, transcription-coupled repair, nucleotide excision repair, Saccharomyces cerevisiae, cyclobutane pyrimidine dimers, UV-induced DNA damage, RBP2, global genome repair, cisplatin sensitivity, X-ray sensitivity, helicase, gene essentiality
- MeSH terms
- Poly-ADP-Ribose Binding Proteins, Amino Acid Sequence, Cockayne Syndrome, DNA Damage, DNA Repair, DNA Helicases, DNA, Fungal, Fungal Proteins, Genes, Fungal, Humans, Molecular Sequence Data, Saccharomyces cerevisiae, Species Specificity, Transcription, Genetic, Ultraviolet Rays, Sequence Alignment, Sequence Homology, Amino Acid, Cell Cycle Proteins, Schizosaccharomyces pombe Proteins, DNA Repair Enzymes
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review