The DOI matches its Crossref record; 56 of the 56 references it cites were found in a registry or an index.
RAD26, the functional S. cerevisiae homolog of the Cockayne syndrome B gene ERCC6.
Open accessAbstract
Transcription-coupled repair (TCR) is a universal sub-pathway of the nucleotide excision repair (NER) system that is limited to the transcribed strand of active structural genes. It accomplishes the preferential elimination of transcription-blocking DNA lesions and permits rapid resumption of the vital process of transcription. A defect in TCR is responsible for the rare hereditary disorder Cockayne syndrome (CS). Recently we found that mutations in the ERCC6 repair gene, encoding a putative helicase, underly the repair defect of CS complementation group B. Here we report the cloning and characterization of the Saccharomyces cerevisiae homolog of CSB/ERCC6, which we designate RAD26. A rad26 disruption mutant appears viable and grows normally, indicating that the gene does not have an essential function. In analogy with CS, preferential repair of UV-induced cyclobutane pyrimidine dimers in the transcribed strand of the active RBP2 gene is severely impaired. Surprisingly, in contrast to the human CS mutant, yeast RAD26 disruption does not induce any UV-, cisPt- or X-ray sensitivity, explaining why it was not isolated as a mutant before. Recovery of growth after UV exposure was somewhat delayed in rad26. These findings suggest that TCR in lower eukaryotes is not very important for cell survival and that the global genome repair pathway of NER is the major determinant of cellular resistance to genotoxicity.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The text we found for this paper looks like another document, so the self-check wasn’t run.
Citations
Cites
Basic local alignment search tool
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669
Multiple sequence alignment with hierarchical clustering.
Corpet, F. (1988) · Nucleic Acids Research · doi:10.1093/nar/16.22.10881 · Cited by 5,575
How eukaryotic transcriptional activators work
Ptashne, M. (1988) · Nature · doi:10.1038/335683a0 · Cited by 1,828
Robbins, J., Dilwortht, S. M., Laskey, R. A., & Dingwall, C. (1991) · Cell · doi:10.1016/0092-8674(91)90245-t · Cited by 1,490
MELLON, I. (1987) · Cell · doi:10.1016/0092-8674(87)90151-6 · Cited by 1,228
Tamkun, J. W., Deuring, R., Scott, M. P., Kissinger, M., Pattatucci, A. M. L., Kaufman, T. C., & Kennison, J. A. (1992) · Cell · doi:10.1016/0092-8674(92)90191-e · Cited by 988
Sancar, A., & Sancar, G. B. (1988) · Annual Review of Biochemistry · doi:10.1146/annurev.bi.57.070188.000333 · Cited by 815
Cockayne syndrome: Review of 140 cases
Nance, M. A., & Berry, S. A. (1992) · American Journal of Medical Genetics · doi:10.1002/ajmg.1320420115 · Cited by 806
DNA Repair Helicase: a Component of BTF2 (TFIIH) Basic Transcription Factor
Schaeffer, L., Roy, R., Humbert, S., Moncollin, V., Vermeulen, W., Hoeijmakers, J. H. J., Chambon, P., & Egly, J. (1993) · Science · doi:10.1126/science.8465201 · Cited by 794
Self-citationTroelstra, C., van Gool, A., de Wit, J., Vermeulen, W., Bootsma, D., & Hoeijmakers, J. H. J. (1992) · Cell · doi:10.1016/0092-8674(92)90390-x · Cited by 729
Self-citationMolecular Mechanism of Transcription-Repair Coupling
Selby, C. P., & Sancar, A. (1993) · Science · doi:10.1126/science.8465200 · Cited by 656
Muchardt, C., & Yaniv, M. (1993) · The EMBO Journal · doi:10.1002/j.1460-2075.1993.tb06112.x · Cited by 588
Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection
Winston, F., & Carlson, M. (1992) · Trends in Genetics · doi:10.1016/0168-9525(92)90300-s · Cited by 574
Mellon, I., & Hanawalt, P. C. (1989) · Nature · doi:10.1038/342095a0 · Cited by 573
Venema, J., Mullenders, L. H. F., Natarajan, A. T., van Zeeland, A. A., & Mayne, L. V. (1990) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.87.12.4707 · Cited by 552
Evidence that SNF2/SWI2 and SNF5 activate transcription in yeast by altering chromatin structure.Preprint
Hirschhorn, J. N., Brown, S. A., Clark, C. D., & Winston, F. (1992) · Genes & Development · doi:10.1101/gad.6.12a.2288 · Cited by 528
A genetic study of X-ray sensitive mutants in yeast
Game, J. C., & Mortimer, R. (1974) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/0027-5107(74)90176-6 · Cited by 477
Nucleotide excision repair in Escherichia coli
Houten, B. V. (1990) · Microbiological Reviews · doi:10.1128/mr.54.1.18-51.1990 · Cited by 443
Huang, J. C., Svoboda, D. L., Reardon, J. T., & Sancar, A. (1992) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.89.8.3664 · Cited by 437
Peterson, C. L., Dingwall, A. K., & Scott, M. P. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.8.2905 · Cited by 410
Cairns, B. R., Kim, Y., Sayre, M. H., Laurent, B. C., & Kornberg, R. D. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.5.1950 · Cited by 403
The ERCC2/DNA repair protein is associated with the class II BTF2/TFIIH transcription factor.
Schaeffer, L., Moncollin, V., Roy, R., Staub, A., Mezzina, M., Sarasin, A. R., Weeda, G., Hoeijmakers, J. H. J., & Egly, J. (1994) · The EMBO Journal · doi:10.1002/j.1460-2075.1994.tb06522.x · Cited by 381
Self-citationDual roles of a multiprotein complex from S. cerevisiae in transcription and DNA repair
Feaver, W. J., Svejstrup, J. Q., Bardwell, L., Bardwell, A. J., Buratowski, S., Gulyas, K. D., Donahue, T. F., Friedberg, E. C., & Kornberg, R. D. (1993) · Cell · doi:10.1016/0092-8674(93)90624-y · Cited by 319
Laurent, B. C., Treich, I., & Carlson, M. (1993) · Genes & Development · doi:10.1101/gad.7.4.583 · Cited by 304
Nucleotide excision repair II: from yeast to mammals
Hoeijmakers, J. H. J. (1993) · Trends in Genetics · doi:10.1016/0168-9525(93)90121-w · Cited by 304
Self-citationDNA REPAIR GENES AND PROTEINS OF SACCHAROMYCES CEREVISIAE
Prakash, S., Sung, P., & Prakash, L. (1993) · Annual Review of Genetics · doi:10.1146/annurev.ge.27.120193.000341 · Cited by 303
Izban, M. G., & Luse, D. S. (1992) · Genes & Development · doi:10.1101/gad.6.7.1342 · Cited by 299
Deficient repair of the transcribed strand of active genes in Cockayne's syndrome cells
van Hoffen, A., Natarajan, A. T., Mayne, L. V., van Zeeland, A. A., Mullenders, L. H. F., & Venema, J. (1993) · Nucleic Acids Research · doi:10.1093/nar/21.25.5890 · Cited by 291
Consequences of Replication Fork Movement Through Transcription Units in Vivo
French, S. L. (1992) · Science · doi:10.1126/science.1455232 · Cited by 259
A mammalian DNA-binding protein that contains a chromodomain and an SNF2/SWI2-like helicase domain.
Delmas, V., Stokes, D. G., & Perry, R. P. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.6.2414 · Cited by 240
Site-specific DNA repair at the nucleosome level in a yeast minichromosome
Smerdon, M. J., & Thoma, F. (1990) · Cell · doi:10.1016/0092-8674(90)90479-x · Cited by 221
Leadon, S. A., & Cooper, P. K. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.22.10499 · Cited by 215
Selby, C. P., Witkin, E. M., & Sancar, A. (1991) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.88.24.11574 · Cited by 215
Verhage, R. A., Zeeman, A., de Groot, N., Gleig, F., Bang, D. D., van de Putte, P., & Brouwer, J. (1994) · Molecular and Cellular Biology · doi:10.1128/mcb.14.9.6135 · Cited by 199
Self-citationReines, D., Chamberlin, M. J., & Kane, C. M. (1989) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)81692-1 · Cited by 189
Bohr, V. A. (1991) · Carcinogenesis · doi:10.1093/carcin/12.11.1983 · Cited by 177
Three complementation groups in Cockayne syndrome
Lehmann, A. R. (1982) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/0027-5107(82)90115-4 · Cited by 176
Sweder, K., & Hanawalt, P. C. (1992) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.89.22.10696 · Cited by 175
Roza, L., Kj, V. D. W., MacFarlane, S. J., Lohman, P. H. M., & Baan, R. A. (1988) · Photochemistry and Photobiology · doi:10.1111/j.1751-1097.1988.tb02873.x · Cited by 136
Leadon, S. A., & Lawrence, D. A. (1991) · Mutation Research/DNA Repair · doi:10.1016/0921-8777(91)90019-l · Cited by 108
Higgins, D. R., Prakash, S., Reynolds, P. R., Polakowska, R. R., Weber, S. C., & Prakash, L. (1983) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.80.18.5680 · Cited by 107
Molecular cloning of RAD16, a gene involved in differential repair inSaccharomyces cerevisiae
Bang, D. D., Verhage, R. A., Goosen, N., Brouwer, J., & van de Putte, P. (1992) · Nucleic Acids Research · doi:10.1093/nar/20.15.3925 · Cited by 106
Self-citationGenetic complementation groups in Cockayne syndrome
Tanaka, K., Kawai, K., Kumahara, Y., Ikenaga, M., & Okada, Y. (1981) · Somatic Cell and Molecular Genetics · doi:10.1007/bf01542989 · Cited by 103
Hanawalt, P. C., & Mellon, I. (1993) · Current Biology · doi:10.1016/0960-9822(93)90156-i · Cited by 102
Repair and Transcription: Collision or collusion?
Hanawalt, P. C., Donahue, B. A., & Sweder, K. S. (1994) · Current Biology · doi:10.1016/s0960-9822(00)00112-3 · Cited by 98
Girdham, C. H., & Glover, D. M. (1991) · Genes & Development · doi:10.1101/gad.5.10.1786 · Cited by 87
Subunit II of yeast QH2:cytochrome‐c oxidoreductase
Oudshoorn, P., STEEG, H. V., Swinkels, B. W., SCHOPPINK, P. J., & Grivell, L. A. (1987) · European Journal of Biochemistry · doi:10.1111/j.1432-1033.1987.tb10741.x · Cited by 85
Oller, A. R., Fijałkowska, I. J., Dunn, R. L., & Schaaper, R. M. (1992) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.89.22.11036 · Cited by 84
RNA Polymerase Marching Backward
Kassavetis, G. A., & Geiduschek, E. P. (1993) · Science · doi:10.1126/science.7679800 · Cited by 72
Verhage, R. A., Zeeman, A., de Groot, N., Gleig, F., Bang, D. D., van de Putte, P., & Brouwer, J. (1994) · Molecular and Cellular Biology · doi:10.1128/mcb.14.9.6135-6142.1994 · Cited by 56
Self-citationThe repair of ionising radiation-induced damage to DNA.
Price, A. L. (1993) · PubMed · Cited by 53
Yoshimoto, H., & Yamashita, I. (1991) · Molecular and General Genetics MGG · doi:10.1007/bf00282476 · Cited by 48
Excision repair in Cockayne syndrome
Mayne, L. V., Lehmann, A. R., & Waters, R. (1982) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/0027-5107(82)90200-7 · Cited by 48
UV-induced photolesions, their repair and mutations
Mullenders, L. H. F., Dokkum, A. M. H.-V., Kalle, W. H. J., Vrieling, H., Zdzienicka, M. Z., & van Zeeland, A. A. (1993) · Mutation Research/Genetic Toxicology · doi:10.1016/0165-1218(93)90103-k · Cited by 26
A Possible Yeast Homolog of Human Active-Gene-Repairing Helicase ERCC6
Huang, M., Chuat, J., & Galibert, F. (1994) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1994.1703 · Cited by 11
Cited by
Sorted by citations
Identification of multiple distinct Snf2 subfamilies with conserved structural motifs
Flaus, A. (2006) · Nucleic Acids Research · doi:10.1093/nar/gkl295 · Cited by 750
Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions
Eisen, J. A., Sweder, K., & Hanawalt, P. C. (1995) · Nucleic Acids Research · doi:10.1093/nar/23.14.2715 · Cited by 712
The Werner syndrome protein is a DNA helicase
Gray, M. D., Shen, J.-C., Kamath‐Loeb, A. S., Blank, A., Sopher, B. L., Martin, G. M., Oshima, J., & Loeb, L. A. (1997) · Nature Genetics · doi:10.1038/ng0997-100 · Cited by 600
Mechanisms of human DNA repair: an update
Christmann, M., Tomicic, M. T., Roos, W. P., & Kaina, B. (2003) · Toxicology · doi:10.1016/s0300-483x(03)00287-7 · Cited by 599
Fousteri, M., & Mullenders, L. H. (2008) · Cell Research · doi:10.1038/cr.2008.6 · Cited by 487
Metadata
- Authors
- van Gool, A. J., Verhage, R., Swagemakers, S. M., van de Putte, P., Brouwer, J., Troelstra, C., Bootsma, D., & Hoeijmakers, J. H.
- Affiliations
- Erasmus University Rotterdam (NL)
- ORCID
- Hoeijmakers, J.H.
- Venue
- The EMBO Journal
- Published
- 1994-11-01
- Volume
- 13
- Issue
- 22
- Pages
- 5361-5369
- ISSN
- 0261-4189 (ISSN-L)
- 1460-2075
- PMC
- PMC395493
- OpenAlex
- W2112652171
- Cited by
- 246
- References
- 56
- Citations by year
- 2025: 2 · 2024: 5 · 2023: 5 · 2022: 6 · 2021: 8 · 2020: 2 · 2019: 1 · 2018: 3 · 2017: 4 · 2016: 8 · 2015: 3 · 2014: 7 · 2013: 7 · 2012: 4
- FWCI
- 6.46
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- The EMBO Journal (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- RePub (Erasmus University Rotterdam) (submittedVersion, other-oa)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Fungal and yeast genetics research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Nuclear Structure and Function
- Keywords
- Rad26, ERCC6, Cockayne syndrome B, transcription-coupled repair, nucleotide excision repair, Saccharomyces cerevisiae, cyclobutane pyrimidine dimers, UV-induced DNA damage, RBP2, global genome repair, cisplatin sensitivity, X-ray sensitivity, helicase, gene essentiality
- MeSH terms
- Poly-ADP-Ribose Binding Proteins, Amino Acid Sequence, Cockayne Syndrome, DNA Damage, DNA Repair, DNA Helicases, DNA, Fungal, Fungal Proteins, Genes, Fungal, Humans, Molecular Sequence Data, Saccharomyces cerevisiae, Species Specificity, Transcription, Genetic, Ultraviolet Rays, Sequence Alignment, Sequence Homology, Amino Acid, Cell Cycle Proteins, Schizosaccharomyces pombe Proteins, DNA Repair Enzymes
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review