Twenty‐five pitfalls in the analysis of diffusion MRI data

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Items 101–200 of 827

1. Diffusion-MRI in neurodegenerative disorders
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2. Diffusion tensor imaging in Alzheimer's disease: insights into the limbic-diencephalic network and methodological considerations
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3. Surface-enhanced tractography (SET)
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4. Diffusion-Weighted Imaging: Recent Advances and Applications.
   E. Martínez-Heras, Francesco Grussu, F. Prados, E. Solana, S. Llufriu · 2021 · Seminars in ultrasound, CT, and MR
5. Diffusion tensor MRI of chemotherapy-induced cognitive impairment in non-CNS cancer patients: a review
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6. Visualizing functional pathways in the human brain using correlation tensors and magnetic resonance imaging
   Zhaohua Ding, Ran Xu, Stephen Bailey, Tung-Lin Wu, Victoria L. Morgan, Laurie E. Cutting, Adam W. Anderson, John C. Gore · 2015 · Magnetic Resonance Imaging
7. Diffusion Tensor Imaging Biomarkers to Predict Motor Outcomes in Stroke: A Narrative Review
   Luciana Monteiro Moura, Rafael Luccas, Joselisa Péres Queiroz de Paiva, Edson Amaro, Alexander Leemans, Cláudia da Costa Leite, Maria Concepción García Otaduy, Adriana Bastos Conforto · 2019 · Frontiers in Neurology
8. Diffusion Tensor Cardiovascular Magnetic Resonance Imaging
   Zohya Khalique, Pedro Ferreira, Andrew D. Scott, Sònia Nielles‐Vallespin, David Nigel Firmin, Dudley John Pennell · 2019 · JACC. Cardiovascular imaging
9. White matter pathways and social cognition
   Yin Wang, Athanasia Metoki, Kylie H. Alm, Ingrid R. Olson · 2018 · Neuroscience & Biobehavioral Reviews
10. Cerebrovascular risk factors impact frontoparietal network integrity and executive function in healthy ageing
    Michele Veldsman, Xin-You Tai, Thomas E. Nichols, Stephen M. Smith, João Pedro Fernandes Peixoto, Sanjay Manohar, Masud Husain B · 2020 · Nature Communications
11. Probabilistic versus deterministic tractography for delineation of the cortico-subthalamic hyperdirect pathway in patients with Parkinson disease selected for deep brain stimulation
    Mikkel Steen Petersen, Torben E. Lund, Niels Aagaard Sunde, Jesper R. Frandsen, Frederikke Rosendal, Niels Juul, Karen Østergaard · 2016 · Journal of neurosurgery
12. Individual white matter bundle trajectories are associated with deep brain stimulation response in obsessive-compulsive disorder
    Liebrand, L.C., Caan, M.W.A., Schuurman, P.R., van den Munckhof, P., Figee, M., Denys, D., van Wingen, G.A. · 2019 · Brain Stimulation
13. Radiomics in radiooncology – challenging the medical physicist
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14. Mindfulness-Based Stress Reduction-related changes in posterior cingulate resting brain connectivity
    Tammi R. A. Kral, Ted Imhoff‐Smith, Douglas Dean, Daniel W. Grupe, Nagesh Adluru, Elena G. Patsenko, Jeanette A. Mumford, Robin I. Goldman, Melissa A. Rosenkranz, Richard J. Davidson · 2019 · Social Cognitive and Affective Neuroscience
15. Q-ball of inferior fronto-occipital fasciculus and beyond.
    Caverzasi, Eduardo, Papinutto, Nico, Amirbekian, Bagrat, Berger, Mitchel S., Henry, Roland G. · 2014 · PLoS ONE
16. Identification and interpretation of microstructural abnormalities in motor pathways in adolescents born preterm
    Samuel Groeschel, Jacques‐Donald Tournier, Gemma B. Northam, Torsten Baldeweg, John Stephen Wyatt, Brigitte Vollmer, Alan Connelly · 2013 · NeuroImage
17. In vivo quantification of global connectivity in the human corpus callosum
    Kevin Jarbo, Timothy Verstynen, Walter Schneider · 2011 · NeuroImage
18. Estimation of Extracellular Volume from Regularized Multi-shell Diffusion MRI
    Pasternak, Ofer, Shenton, Martha E., Westin, Carl-Fredrik · 2012 · Lecture Notes in Computer Science
19. The role of diffusion tensor imaging in brain tumor surgery: A review of the literature
    Adriaan R. E. Potgieser, Michiel Wagemakers, Arjen L. J. van Hulzen, Bauke M. de Jong, Eelco Wieger Hoving, Rob J. M. Groen · 2014 · Clinical Neurology and Neurosurgery
20. Imaging the pathoanatomy of amyotrophic lateral sclerosis in vivo: targeting a propagation-based biological marker
    Jan Kassubek, Hans‐Peter Müller, Kelly Del Tredici, Dorothée E. Lulé, Martin Gorges, Heiko Braak, Albert Christian Ludolph · 2017 · Journal of Neurology Neurosurgery & Psychiatry
21. The Seven Deadly Sins of Measuring Brain Structural Connectivity Using Diffusion MRI Streamlines Fibre-Tracking
    Fernando Calamante · 2019 · Diagnostics
22. Does diffusion MRI tell us anything about the white matter? An overview of methods and pitfalls
    Lauren J. O’Donnell, Ofer Pasternak · 2014 · Schizophrenia Research
23. Validation strategies for the interpretation of microstructure imaging using diffusion MRI
    Tim B. Dyrby, Giorgio M. Innocenti, Martin Bech, Henrik Lundell · 2018 · NeuroImage
24. Free water elimination improves test–retest reproducibility of diffusion tensor imaging indices in the brain: A longitudinal multisite study of healthy elderly subjects
    Angela Albi, Ofer Pasternak, Ludovico Minati, Moira Marizzoni, David Bartrés-faz A, Núria Bargalló, Beatríz Bosch, Paolo Maria Rossini, Camillo Marra, Bernhard W. Müller et al. · 2016 · Human Brain Mapping
25. Microstructural organizational patterns in the human corticostriatal system
    Timothy Verstynen, David Badre, Kevin Jarbo, Walter Schneider · 2012 · Journal of Neurophysiology
26. Longitudinal reliability of tract‐based spatial statistics in diffusion tensor imaging
    Tara M. Madhyastha, Susan Mérillat, Sarah Hirsiger, Ladina Bezzola, Franziskus Liem, Thomas J. Grabowski, Lutz Jäncke · 2014 · Human Brain Mapping
27. Evaluating the Accuracy of Diffusion MRI Models in White Matter
    A. Rokem, Jason D. Yeatman, F. Pestilli, Kendrick Norris Kay, A. Mezer, S. van der Walt, B. Wandell · 2015 · PLoS ONE
28. Asymmetry and Structure of the Fronto-Parietal Networks Underlie Visuomotor Processing in Humans
    Sanja Budisavljević, Flavio Dell’Acqua, Debora Zanatto, Chiara Begliomini, Diego Miotto M. D, Raffaella Motta, Umberto Castiello · 2016 · Cerebral Cortex
29. Multisite longitudinal reliability of tract-based spatial statistics in diffusion tensor imaging of healthy elderly subjects
    Jorge Jovicich, Moira Marizzoni, Beatríz Bosch, David Bartrés-faz A, Jennifer Arnold, Jens Benninghoff, Jens Wiltfang, Luca Roccatagliata, Agnese Picco, Flavio Mariano Nobili et al. · 2014 · NeuroImage
30. A Unified Approach to Diffusion Direction Sensitive Slice Registration and 3-D DTI Reconstruction From Moving Fetal Brain Anatomy
    Mads Fogtmann Hansen, Sharmishtaa Seshamani, Christopher D. Kroenke, Xi En Cheng, Teresa Chapman, Jakob Wilm, François Rousseau, Colin Studholme · 2013 · IEEE Transactions on Medical Imaging
31. Diffusion Tractography in Deep Brain Stimulation Surgery: A Review
    Evan Calabrese · 2016 · Frontiers in Neuroanatomy
32. Diffusion Tensor Imaging of TBI
    David Douglas, Michael Iv, Pamela K. Douglas, Ariana Anderson, Sjoerd B. Vos, Roland Bammer, Michael Zeineh, Max Wintermark · 2015 · Topics in Magnetic Resonance Imaging
33. On the cortical connectivity in the macaque brain: a comparison of diffusion tractography and histological tracing data
    Girard, Gabriel, Caminiti, Roberto, Battaglia-Mayer, Alexandra, St-Onge, Etienne, Ambrosen, Karen S., Eskildsen, Simon F., Krug, Kristine, Dyrby, Tim B., Descoteaux, Maxime, Thiran, Jean-Philippe et al. · 2020 · NeuroImage
34. Functional and Structural Network Recovery after Mild Traumatic Brain Injury: A 1-Year Longitudinal Study
    Patrizia Dall’Acqua, Sönke Johannes, Ladislav Mica, Hans‐Peter Simmen, Richard Glaab, Javier Fandino, Markus Schwendinger, Christoph Meier, Erika Jasmin Ulbrich, Andreas Felix Müller et al. · 2017 · Frontiers in Human Neuroscience
35. Effects of <i>APOE</i> on brain white matter microstructure in healthy adults
    Westlye, Lars T., Reinvang, Ivar, Rootwelt, Helge, Espeseth, Thomas · 2012 · Neurology
36. Interactions between White Matter Asymmetry and Language during Neurodevelopment
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37. Diffusion tensor imaging correlates of reading ability in dysfluent and non-impaired readers
    Catherine A. Lebel, Bennett A. Shaywitz, John M. Holahan, Sally E. Shaywitz, Karen E. Marchione, Christian Beaulieu · 2013 · Brain and Language
38. Altered functional connectivity in the default mode network is associated with cognitive impairment and brain anatomical changes in Parkinson's disease
    Olaia Lucas‐Jiménez, Natalia Ojeda, Javier Peña, María Díez‐Cirarda, Alberto Cabrera‐Zubizarreta, Juan Carlos Gómez‐Esteban, María Ángeles Gómez‐Beldarrain, Naroa Ibarretxe‐Bilbao · 2016 · Parkinsonism & Related Disorders
39. White matter alterations in Parkinson’s disease with normal cognition precede grey matter atrophy
    Ivan Rektor, Alena Svátková, Ľubomír Vojtíšek, Iva Zikmundová, Jirí Vaníček, András Király, Nikoletta Szabó · 2018 · PLoS ONE
40. Dissecting the Fornix in Basic Memory Processes and Neuropsychiatric Disease: A Review
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41. MITK Diffusion Imaging
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42. Basal ganglia network by constrained spherical deconvolution: A possible cortico‐pallidal pathway?
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43. Age Differentiation within Gray Matter, White Matter, and between Memory and White Matter in an Adult Life Span Cohort
    Susanne M. M. de Mooij, Richard N. Henson, Lourens Waldorp, Cam-CAN, Rogier Kievit · 2018 · Journal of Neuroscience
44. Precision and Accuracy in Diffusion Tensor Magnetic Resonance Imaging
    Derek Kenton Jones · 2010 · Topics in Magnetic Resonance Imaging
45. Lesion mapping in acute stroke aphasia and its implications for recovery
    Stephanie J. Forkel, Marco Catani · 2018 · Neuropsychologia
46. Accelerated human cardiac diffusion tensor imaging using simultaneous multislice imaging
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47. Tensor‐valued diffusion MRI in under 3 minutes: an initial survey of microscopic anisotropy and tissue heterogeneity in intracranial tumors
    Markus Nilsson, Filip Szczepankiewicz, Jan Brabec, Marie K. Taylor, Carl‐Fredrik Westin, Alexandra J. Golby, Danielle van Westen, Pia C. Sundgren · 2019 · Magnetic Resonance in Medicine
48. How Klingler’s dissection permits exploration of brain structural connectivity? An electron microscopy study of human white matter
    Ilyess Zemmoura, Emmanuelle Blanchard, P. I. Raynal, Cécilia Rousselot‐Denis, Christophe Destrieux, Stéphane Velut · 2015 · Brain Structure and Function
49. Magnitude and timing of major white matter tract maturation from infancy through adolescence with NODDI
    Lynch, Kirsten M., Cabeen, Ryan P., Toga, Arthur W., Clark, Kristi A. · 2020 · NeuroImage
50. White matter integrity and cognitive performance in school-age children: A population-based neuroimaging study
    Ryan L. Muetzel, Sabine E. Mous, Jan van der Ende, Laura M. E. Blanken, Aad van der Lugt, Vincent W. V. Jaddoe, Frank C. Verhulst, Henning W. Tiemeier, Tonya J.H. White · 2015 · NeuroImage
51. Leveraging multi-shell diffusion for studies of brain development in youth and young adulthood
    Adam Robert Pines, Matthew Cieslak, Bart Larsen, Graham L. Baum, Philip A. Cook, Azeez Adebimpe, Diego G. Dávila, Mark A. Elliott, Robert J. Jirsaraie, Kristin A. Murtha et al. · 2020 · Developmental Cognitive Neuroscience
52. Structural white matter asymmetries in relation to functional asymmetries during speech perception and production
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53. Deep learning based segmentation of brain tissue from diffusion MRI
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54. Abnormal structural connectivity between the basal ganglia, thalamus, and frontal cortex in patients with disorders of consciousness
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55. Recovery of neural dynamics criticality in personalized whole-brain models of stroke
    Rodrigo P. Rocha, Loren Koçillari, Samir Simon Suweis, Michele De Filippo De Grazia, Michel Thiebaut de Schotten, Marco Zorzi, Maurizio Corbetta · 2022 · Nature Communications
56. “MASSIVE” brain dataset: Multiple acquisitions for standardization of structural imaging validation and evaluation
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57. Global Efficiency of Structural Networks Mediates Cognitive Control in Mild Cognitive Impairment
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58. Diagnostic accuracy of MRI and ultrasound in chronic immune-mediated neuropathies
    Jos Oudeman, Filip Eftimov, Gustav J. Strijkers, Joppe J. Schneiders, Stefan D. Roosendaal, Maurits Peter Engbersen, Martijn Froeling, Hendrik Stephan Goedee, Pieter A. van Doorn, Matthan W.A. Caan et al. · 2019 · Neurology
59. MRI Tractography of Corticospinal Tract and Arcuate Fasciculus in High-Grade Gliomas Performed by Constrained Spherical Deconvolution: Qualitative and Quantitative Analysis
    Enricomaria Mormina, Marcello Longo, Alessandro Arrigo, Concetta Alafaci, Francesco F. Tomasello, Alessandro Calamuneri, Silvia Marino, Michele Gaeta, Sergio Lucio Vinci, Francesca Granata · 2015 · American Journal of Neuroradiology
60. The Relationship Between White Matter Microstructure and General Cognitive Ability in Patients With Schizophrenia and Healthy Participants in the ENIGMA Consortium
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61. Variability in diffusion kurtosis imaging: Impact on study design, statistical power and interpretation
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62. Potential and limitations of diffusion MRI tractography for the study of language
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63. CSF contamination contributes to apparent microstructural alterations in mild cognitive impairment
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64. Reduced integration and differentiation of the imitation network in autism: A combined functional connectivity magnetic resonance imaging and diffusion‐weighted imaging study
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65. Multiple Slits regulate the development of midline glial populations and the corpus callosum
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66. Direct evidence of intra- and interhemispheric corticomotor network degeneration in amyotrophic lateral sclerosis: An automated MRI structural connectivity study
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67. Diffusion Tensor–MRI Evidence for Extra-Axonal Neuronal Degeneration in Caudate and Thalamic Nuclei of Patients with Multiple Sclerosis
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68. White matter in temporal lobe epilepsy: clinico-pathological correlates of water diffusion abnormalities.
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69. Characterization of Functional and Structural Integrity in Experimental Focal Epilepsy: Reduced Network Efficiency Coincides with White Matter Changes
    W. Otte, R. Dijkhuizen, M. P. V. van Meer, W. S. van der Hel, Suzanne A. M. W. Verlinde, O. van Nieuwenhuizen, M. Viergever, C. Stam, K. Braun · 2012 · PLoS ONE
70. Motion correction and registration of high b‐value diffusion weighted images
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71. Impact of MR Acquisition Parameters on DTI Scalar Indexes: A Tractography Based Approach
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72. Models of Network Spread and Network Degeneration in Brain Disorders
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73. Mapping White Matter Microstructure in the One Month Human Brain
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74. Detecting microstructural deviations in individuals with deep diffusion MRI tractometry
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75. BTK: An open-source toolkit for fetal brain MR image processing
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76. The effect of concomitant gradient fields on diffusion tensor imaging
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77. Can Musical Training Influence Brain Connectivity? Evidence from Diffusion Tensor MRI
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78. Voxel-wise detection of functional networks in white matter
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79. The Limbic and Sensorimotor Pathways of the Human Amygdala: A Structural Connectivity Study
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80. Diffusion Tensor Imaging and Neuromodulation
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81. Constrained spherical deconvolution analysis of the limbic network in human, with emphasis on a direct cerebello-limbic pathway
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82. Decoding gender dimorphism of the human brain using multimodal anatomical and diffusion MRI data
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83. White Matter Connectivity of the Thalamus Delineates the Functional Architecture of Competing Thalamocortical Systems
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84. Separating blood and water: Perfusion and free water elimination from diffusion MRI in the human brain
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85. Histological and MRI markers of white matter damage in focal epilepsy.
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86. Reproducibility, reliability and variability of FA and MD in the older healthy population: A test-retest multiparametric analysis
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87. Diffusion-Weighted Imaging in Mild Traumatic Brain Injury: A Systematic Review of the Literature
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88. Cerebellar white matter pathways are associated with reading skills in children and adolescents
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89. Characterizing white matter changes in chronic schizophrenia: A free-water imaging multi-site study
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90. Characterisation of brain volume and microstructure at term-equivalent age in infants born across the gestational age spectrum
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91. Diffusion-based tractography atlas of the human acoustic radiation
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92. The average pathlength map: A diffusion MRI tractography-derived index for studying brain pathology
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93. Direct diffusion-based parcellation of the human thalamus
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94. Functional connectivity and activity of white matter in somatosensory pathways under tactile stimulations
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95. White matter damage and systemic inflammation in Parkinson’s disease
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96. DTI tractography and white matter fiber tract characteristics in euthymic bipolar I patients and healthy control subjects
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97. Tract Specific Reproducibility of Tractography Based Morphology and Diffusion Metrics
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98. Axon density and axon orientation dispersion in children born preterm
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99. How structure sculpts function: Unveiling the contribution of anatomical connectivity to the brain's spontaneous correlation structure
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100. Physical neglect during childhood alters white matter connectivity in healthy young males
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