The DOI matches its Crossref record; 4 of the 4 references it cites were found in a registry or an index.
Visualization of LC‐MS/MS proteomics data in MaxQuant
Open accessAbstract
Modern software platforms enable the analysis of shotgun proteomics data in an automated fashion resulting in high quality identification and quantification results. Additional understanding of the underlying data can be gained with the help of advanced visualization tools that allow for easy navigation through large LC‐MS/MS datasets potentially consisting of terabytes of raw data. The updated MaxQuant version has a map navigation component that steers the users through mass and retention time‐dependent mass spectrometric signals. It can be used to monitor a peptide feature used in label‐free quantification over many LC‐MS runs and visualize it with advanced 3D graphic models. An expert annotation system aids the interpretation of the MS/MS spectra used for the identification of these peptide features.
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Cox, J., & Mann, M. (2008) · Nature Biotechnology · doi:10.1038/nbt.1511 · Cited by 14,855
Self-citationCox, J., Hein, M. Y., Luber, C. A., Paron, I., Nagaraj, N., & Mann, M. (2014) · Molecular & Cellular Proteomics · doi:10.1074/mcp.m113.031591 · Cited by 5,180
Self-citationMichalski, A., Cox, J., & Mann, M. (2011) · Journal of Proteome Research · doi:10.1021/pr101060v · Cited by 685
Self-citationAnalysis of High Accuracy, Quantitative Proteomics Data in the MaxQB Database
Schaab, C., Geiger, T., Stoehr, G., Cox, J., & Mann, M. (2012) · Molecular & Cellular Proteomics · doi:10.1074/mcp.m111.014068 · Cited by 164
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The Perseus computational platform for comprehensive analysis of (prote)omics data
Tyanova, S., Temu, T., Sinitcyn, P., Carlson, A., Hein, M. Y., Geiger, T., Mann, M., & Cox, J. (2016) · Nature Methods · doi:10.1038/nmeth.3901 · Cited by 8,803
Self-citationFellows, R., Denizot, J., Stellato, C., Cuomo, A., Jain, P., Stoyanova, E., Balázsi, S., Hajnády, Z., Liebert, A., Kazakevych, J., et al. (2018) · Nature Communications · doi:10.1038/s41467-017-02651-5 · Cited by 568
Traumatic injury compromises nucleocytoplasmic transport and leads to TDP-43 pathology
Anderson, E. N., Morera, A. A., Kour, S., Cherry, J. D., Ramesh, N., Gleixner, A., Schwartz, J. C., Ebmeier, C., Old, W., Donnelly, C. J., et al. (2021) · eLife · doi:10.7554/elife.67587 · Cited by 61
O’Meara, T. R., O’Meara, M. J., Polvi, E. J., Pourhaghighi, M. R., Liston, S. D., Lin, Z.-Y., Veri, A. O., Emili, A., Gingras, A.-C., & Cowen, L. E. (2019) · PLoS Biology · doi:10.1371/journal.pbio.3000358 · Cited by 49
Zenaide-Neto, H., Pedersoli, W. R., Maués, D. B., Pereira, L. M. S., Taveira, I. C., Simon, T. D. A., Steindorff, A. S., Faça, V. M., de Paula, R. G., & Silva, R. N. (2026) · World Journal of Microbiology and Biotechnology · doi:10.1007/s11274-026-05252-x
Metadata
- Authors
- Tyanova, S., Temu, T., Carlson, A., Sinitcyn, P., Mann, M., & Cox, J.
- Venue
- PROTEOMICS
- Publisher
- Wiley
- Published
- 2015-03-05
- Volume
- 15
- Issue
- 8
- Pages
- 1453-1456
- ISSN
- 1615-9853 (ISSN-L)
- 1615-9861
- OpenAlex
- W2042510382
- Cited by
- 263
- References
- 4
- FWCI
- 8.63
- Type
- journal article
- Language
- en
- Open access
- hybrid
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