The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.
Within the twilight zone: a sensitive profile-profile comparison tool based on information theory
Overview
The claims and statistics of this paper haven’t been checked yet.
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Integrity signals
Registry
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Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
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Citations
Cites
Needleman, S. B., & Wunsch, C. D. (1970) · Journal of Molecular Biology · doi:10.1016/0022-2836(70)90057-4 · Cited by 11,288
Cited by
Comparative protein structure modeling using MODELLER
Webb, B., & Sali, A. (2016) · Current Protocols in Protein Science · doi:10.1002/cpps.20 · Cited by 730
“…a number of variants of profile-profile alignment methods that differ in the scoring functions they use (Pietrokovski, 1996; Rychlewski et al., 1998; Yona and Levitt, 2002; Panchenko, 2003; Sadreyev and Grishin, 2003; von Ohsen et al., 2003; Edgar, 2004; Marti-Renom et al., 2004; Zhou and Zhou,…”
BackgroundA novel sequence alignment algorithm based on deep learning of the protein folding code
Gao, M., & Skolnick, J. (2021) · Bioinformatics · doi:10.1093/bioinformatics/btaa810 · Cited by 18
Kumar, L., Brenner, N., Sledzieski, S., Olaosebikan, M., Roger, L. M., Lynn-Goin, M., Klein-Seetharaman, R., Berger, B., Putnam, H., Yang, J., et al. (2023) · PLOS ONE · doi:10.1371/journal.pone.0270965 · Cited by 11
Metadata
- Authors
- Yona, G., & Levitt, M.
- Venue
- Journal of Molecular Biology
- Publisher
- Elsevier BV
- Published
- 2002-02
- Volume
- 315
- Issue
- 5
- Pages
- 1257-1275
- ISSN
- 0022-2836 (ISSN-L)
- OpenAlex
- W2099075703
- Cited by
- 287
- References
- 1
- FWCI
- 10.58
- Type
- journal article
- Language
- en
- Open access
- closed
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
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How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Within the twilight zone: a sensitive profile-profile comparison tool based on information theory. https://app.cochat.ai/papers/10.1006/jmbi.2001.5293
- The paper
- Yona, G., & Levitt, M. (2002). Within the twilight zone: a sensitive profile-profile comparison tool based on information theory. Journal of Molecular Biology. https://doi.org/10.1006/jmbi.2001.5293
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
