Cited by 10

The DOI matches its Crossref record.

Improving Text Mining with Controlled Natural Language: A Case Study for Protein Interactions

Kuhn, Tobias, Royer, Loïc, Fuchs, Norbert E., Schröder, Michael·2006·Lecture Notes in Computer Science

Overview

Integrity signals

Registry

Crossref · 10.1007/11799511_7

Cites

Statistics

Recomputing p-values needs the paper’s full text.

Verification

Claims the paper makes

We couldn’t retrieve this paper’s full text, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Controlled natural language can serve in the fully formalized case as a user-friendly syntax for representing scientific facts.

    “we had shown before that controlled natural language can also serve in the fully formalized case as a user-friendly syntax for representing scientific facts (Kuhn et al., 2006).”

    From Decentralized provenance-aware publishing with nanopublications (2016) · cites this paper as Kuhn et al., 2006

Citations

Cites

No references could be resolved yet.

Research works printed but not linked: 17

  1. Bernstein, A., Kaufmann, E., Kaiser, C.: Querying the Semantic Web with Ginseng: A Guided Input Natural Language Search Engine. In: Department of Informatics, University of Zurich (2005) · DOI
  2. Booch, G., Rumbaugh, J., Jacobson, I.: The Unified Modeling Language User Guide, 1st edn. Addison-Wesley, Reading (1998)
  3. Cohen, A.M., Hersh, W.R.: A survey of current work in biomedical text mining. Briefings in Bioinformatics 6(1), 57–71 (2004) · DOI
  4. Daraselia, N., Yuryev, A., Egorov, S., Novichkova, S., Nikitin, A., Mazo, I.: Extracting human protein interactions from MEDLINE using a full-sentence parser. Bioinformatics 20(5), 604–611 (2004) · DOI
  5. Doms, A., Schroeder, M.: GoPubMed: exploring PubMed with the Gene Ontology. In Nucleic Acids Research 33, W783–W786 (2005) · DOI
  6. Fuchs, N.E., Kaljurand, K., Schneider, G.: Attempto Controlled English Meets the Challenges of Knowledge Representation, Reasoning, Interoperability and User Interfaces. In: The 19th International FLAIRS Conference (FLAIRS 2006) (2006)
  7. Fuchs, N.E., Schwertel, U., Schwitter, R.: Attempto Controlled English – Not Just Another Logic Specification Language. In: Flener, P. (ed.) LOPSTR 1998. LNCS, vol. 1559, p. 1. Springer, Heidelberg (1999), http://www.ifi.unizh.ch/attempto/publications/papers/LOPSTR98.pdf · DOI
  8. Fitting, M.: First-Order Logic and Automated Theorem Proving, 2nd edn. Springer, New York (1996) · DOI
  9. Giot, L., Bader, J.S., Brouwer, C., Chaudhuri, A., et al.: A Protein Interaction Map of Drosophila melanogaster. Science 302(5651), 1727–1736 (2003) · DOI · Paper page
  10. Gruber, T.R.: Toward Principles for the Design of Ontologies Used for Knowledge Sharing. International Journal of Human-Computer Studies 43(5-6), 907–928 (1995) · DOI · Paper page
  11. Hirschman, L., Park, J.C., Tsujii, J., Wong, L., Wu, C.H.: Accomplishments and challenges in literature data mining for biology. In Bioinformatics Review 18(12), 1553–1561 (2002) · DOI
  12. Nardi, D., Brachman, R.J.: An Introduction to Description Logics. In: The Description Logic Handbook: Theory, Implementation, and Applications. Cambridge University Press, Cambridge (2003)
  13. Schwikowski, B., Uetz, P., Fields, S.: A network of protein-protein interactions in yeast. In Nature Biotechnology 18, 1257–1261 (2000) · DOI
  14. Schwitter, R., Ljungberg, A., Hood, D.: ECOLE: A Look-ahead Editor for a Controlled Language. In: Proceedings of EAMT-CLAW 2003, Controlled Language Translation, pp. 141–150. Dublin City University (2003)
  15. Thompson, C.W., Pazandak, P., Tennant, H.R.: Talk to Your Semantic Web. In IEEE Internet Computing 9(6), 75–79 (2005) · DOI
  16. Uschold, M., Gruninger, M.: Ontologies: Principles, Methods and Applications. Knowledge Engineering Review 11(2) (1996) · DOI
  17. Yeh, A., Morgan, A., Colosimo, M., Hirschman, L.: BioCreAtIvE Task 1A: gene mention finding evaluation. BMC Bioinformatics 6 (2005) · DOI

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Metadata

Authors
Kuhn, T., Royer, L., Fuchs, N. E., & Schröder, M.
Venue
Lecture Notes in Computer Science
Published
2006
Pages
66-81
ISSN
  • 0302-9743
  • 1611-3349
Cited by
10
References
0

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

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