The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Synaptic Partner Prediction from Point Annotations in Insect Brains
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“Several methods have been proposed for synapse detection in large EM datasets 30–35 but only a few solved the problem of partner assignments in polyadic synapses in the fly 30,34,36,37.”
From FlyWire: online community for whole-brain connectomics (2022) · cites this paper as [37]
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Cites
U-Net: Convolutional Networks for Biomedical Image Segmentation
Ronneberger, O., Fischer, P., & Brox, T. (2015) · Lecture notes in computer science · doi:10.1007/978-3-319-24574-4_28 · Cited by 99,404
Automated synaptic connectivity inference for volume electron microscopy
Dorkenwald, S., Schubert, P. J., Killinger, M. F., Urban, G., Mikula, S., Svara, F., & Kornfeld, J. (2017) · Nature Methods · doi:10.1038/nmeth.4206 · Cited by 132
Research works printed but not linked: 12
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- Funke, J., et al.: Large scale image segmentation with structured loss based deep learning for connectome reconstruction. IEEE Trans. Pattern Anal. Mach. Intell. (early access). https://doi.org/10.1109/TPAMI.2018.2835450 · DOI
- Huang, G.B., Scheffer, L.K., Plaza, S.M.: Fully-automatic synapse prediction and validation on a large data set. arXiv preprint arXiv:1604.03075 (2016) · arXiv
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- Kasthuri, N., et al.: Saturated reconstruction of a volume of neocortex. Cell 162(3), 648–661 (2015) · DOI · Paper page
- Kingma, D.P., Ba, J.: Adam: A method for stochastic optimization. CoRR abs/1412.6980 (2014). http://arxiv.org/abs/1412.6980 · arXiv
- Kreshuk, A., Funke, J., Cardona, A., Hamprecht, F.A.: Who is talking to whom: synaptic partner detection in anisotropic volumes of insect brain. In: Navab, N., Hornegger, J., Wells, W.M., Frangi, A.F. (eds.) MICCAI 2015. LNCS, vol. 9349, pp. 661–668. Springer, Cham (2015). https://doi.org/10.1007/978-3-319-24553-9_81 · DOI · Paper page
- Kreshuk, A., Koethe, U., Pax, E., Bock, D.D., Hamprecht, F.A.: Automated detection of synapses in serial section transmission electron microscopy image stacks. PloS One 9(2), e87351 (2014) · DOI
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- Roncal, W.G., et al.: Vesicle: volumetric evaluation of synaptic interfaces using computer vision at large scale. arXiv preprint arXiv:1403.3724 (2014) · DOI
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Sorted by citations
FlyWire: online community for whole-brain connectomics
Dorkenwald, S., McKellar, C. E., Macrina, T., Kemnitz, N., Lee, K., Lu, R., Wu, J., Popovych, S., Mitchell, E., Nehoran, B., et al. (2022) · Nature Methods · doi:10.1038/s41592-021-01330-0 · Cited by 289
Eckstein, N., Bates, A. S., Champion, A., Du, M., Yin, Y., Schlegel, P., Lu, A. K.-Y., Rymer, T., Finley-May, S., Paterson, T., et al. (2024) · Cell · doi:10.1016/j.cell.2024.03.016 · Cited by 277
Self-citationPhelps, J. S., Hildebrand, D. G. C., Graham, B. J., Kuan, A. T., Thomas, L. A., Nguyen, T. M., Buhmann, J., Azevedo, A. W., Sustar, A., Agrawal, S., et al. (2021) · Cell · doi:10.1016/j.cell.2020.12.013 · Cited by 265
Self-citationAutomatic detection of synaptic partners in a whole-brain Drosophila electron microscopy data set
Buhmann, J., Sheridan, A., Malin-Mayor, C., Schlegel, P., Gerhard, S., Kazimiers, T., Krause, R., Nguyen, T. M., Heinrich, L., Lee, W.-C. A., et al. (2021) · Nature Methods · doi:10.1038/s41592-021-01183-7 · Cited by 175
Self-citationEckstein, N., Bates, A. S., Champion, A., Du, M., Yin, Y., Schlegel, P., Lu, A. K.-Y., Rymer, T., Finley-May, S., Paterson, T., et al. (2020) · doi:10.1101/2020.06.12.148775 · Cited by 115
Self-citation
Metadata
- Authors
- Buhmann, J., Krause, R., Lentini, R. C., Eckstein, N., Cook, M., Turaga, S., & Funke, J.
- Venue
- Lecture Notes in Computer Science
- Publisher
- Springer International Publishing
- Published
- 2018
- Pages
- 309-316
- ISSN
- 0302-9743
- 1611-3349
- Cited by
- 15
- References
- 2
- Language
- en
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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