The DOI matches its Crossref record.
Siderotyping of fluorescent Pseudomonas: molecular mass determination by mass spectrometry as a powerful pyoverdine siderotyping method
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Consequently, many specific uptake strategies have been developed by microorganisms in particular the production of siderophores, small molecules (200–2000 Da) with a high affinity for Fe3+ produced in iron limited conditions [46,47,48].”
From A Review of Asbestos Bioweathering by Siderophore-Producing Pseudomonas: A Potential Strategy of Bioremediation (2020) · cites this paper as [47]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
No references could be resolved yet.
Research works printed but not linked: 57
- Amann C, Taraz K, Budzikiewicz H, Meyer JM (2000) The siderophores of Pseudomonas fluorescens 18.1 and the importance of cyclopeptidic substructures for the recognition at the cell surface. Z Naturforsch 55c:671–680 · doi:10.1515/znc-2000-9-1001
- Barelmann I, Fernandez DU, Budzikiewicz H, Meyer JM (2003) The pyoverdine from Pseudomonas chlororaphis D-TR133 showing mutual acceptance with the pyoverdine of Pseudomonas fluorescens CHA0. BioMetals 16:263–270 · doi:10.1023/a:1020615830765
- Barelmann I, Taraz K, Budzikiewicz H, Geoffroy VA, Meyer JM (2002) The structures of the pyoverdins from two Pseudomonas fluorescens strains accepted mutually by their respective producers. Z Naturforsch 57c:9–16 · doi:10.1515/znc-2002-1-202
- Beiderbeck H, Risse D, Budzikiewicz H, Taraz K (1999a) A new pyoverdin from Pseudomonas aureofaciens. Z Naturforsch 54c:1–5
- Beiderbeck H, Taraz K, Meyer JM (1999b) Revised structures of the pyoverdins from Pseudomonas putida CFBP 2461 and from Pseudomonas fluorescens CFBP 2392. BioMetals 12:331–338 · doi:10.1023/a:1009227520314
- Briskot G, Taraz K, Budzikiewicz H (1989) Pyoverdine-type siderophores from Pseudomonas aeruginosa. Liebigs Ann Chem 375–384 · DOI
- Budzikiewicz H (2004) Siderophores of the Pseudomonadaceae sensu stricto (fluorescent and non-fluorescent Pseudomonas spp.). Prog Chem Org Nat Prod 87:81–237 · DOI · Paper page
- Budzikiewicz H, Fernandez DU, Fuchs R, Michalke R, Taraz K, Ruangviriyachai C (1999) Pyoverdines with a Lys ε-amino link in the peptide chain? Z Naturforsch 54c:1021–1026 · doi:10.1515/znc-1999-1205
- Budzikiewicz H, Kilz S, Taraz K, Meyer JM (1997) Identical pyoverdines from Pseudomonas fluorescens 9AW and from Pseudomonas putida 9BW. Z Naturforsch 52c:721–728 · doi:10.1515/znc-1997-11-1202
- Budzikiewicz H, Schäfer M, Fernandez DU, Matthijs S, Cornelis P (2007b) Characterization of the chromophores of pyoverdins and related siderophores by electrospray tandem mass spectrometry. BioMetals 20:135–144 · DOI
- Budzikiewicz H, Schäfer M, Fernandez DU, Meyer JM (2006) Structure proposal for a new pyoverdin from Pseudomonas sp. PS 6.10. Z Naturforsch 61c:815–820 · doi:10.1515/znc-2006-11-1208
- Budzikiewicz H, Schäfer M, Meyer JM (2007a) Siderotyping of fluorescent pseudomonads—problems in the determination of molecular masses by Mass Spectroscopy. Minirev Org Chem 4:246–253 · DOI
- Budzikiewicz H, Schröder H, Taraz K (1992) Zur Biogenese der Pseudomonas-siderophore: der Nachweis analoger Strukturen eines Pyoverdin-Desferribactin-Paares. Z Naturforsch 47c:26–32 · DOI
- Bultreys A, Gheysen I, Wathelet B, Schäfer M, Budzikiewicz H (2004) The pyoverdins of Pseudomonas syringae and Pseudomonas cichorii. Z Naturforsch 59c:613–618 · doi:10.1515/znc-2004-9-1001
- Demange P, Bateman A, Mertz C, Dell A, Piémont Y, Abdullah M (1990) Structures of pyoverdins Pt, siderophores of Pseudomonas tolaasii NCPPB 2192, and pyoverdins Pf, siderophores of Pseudomonas fluorescens CCM 2798. Identification of an unusual natural amino acid. Biochemistry 29:11041–11051 · doi:10.1021/bi00502a005
- Fuchs R, Budzikiewicz H (2000) Structural studies of pyoverdins with cyclopeptidic substructures by electrospray ionization and collision induced fragmentation. Spectroscopy 14:229–246 · doi:10.1155/2000/359324
- Fuchs R, Budzikiewicz H (2001a) Structural studies of pyoverdins by mass spectrometry. Curr Org Chem 5:265–288 · DOI
- Fuchs R, Budzikiewicz H (2001b) Rearrangement reactions in the electrospray ionization mass spectra of pyoverdins. Int J Mass Spectrom 210/211:603–612 · doi:10.1016/s1387-3806(01)00408-0
- Fuchs R, Schäfer M, Geoffroy V, Meyer JM (2001) Siderotyping—a powerful tool for the characterization of pyoverdines. Curr Topics Med Chem 1:31–57 · DOI
- Geisen K, Taraz K, Budzikiewicz H (1992) Neue Siderophore des Pyoverdin-typs aus Pseudomonas fluorescens. Monatsh Chem 123:151–178 · doi:10.1007/bf01045308
- Georgias H, Taraz K, Budzikiewicz H, Geoffroy V, Meyer JM (1999) The structure of the pyoverdin from Pseudomonas fluorescens 1.3. Structural and biological relationships of pyoverdins from different strains. Z Naturforsch 54c:301–308 · doi:10.1515/znc-1999-5-602
- Gipp S, Hahn J, Taraz K, Budzikiewicz H (1991) Zwei Pyoverdine aus Pseudomonas aeruginosa R. Z Naturforsch 46c:534–541 · doi:10.1515/znc-1991-7-806
- Gwose I, Taraz K (1992) Pyoverdine aus Pseudomonas putida. Z Naturforsch 47c:487–502 · doi:10.1515/znc-1992-7-801
- Hohlneicher U, Hartmann R, Taraz K, Budzikiewicz H (1995) Pyoverdin, ferribactin, azotobactin—a new triade of siderophores from Pseudomonas chlororaphis ATCC 9446 and its relation to Pseudomonas fluorescens ATCC 13525. Z Naturforsch 50c:337–344 · DOI
- Jacques P, Ongena M, Gwose I, Seinsche D, Schröder H, Delfosse P, Thonard P, Taraz K, Budzikiewicz H (1995) Structure and characterization of isopyoverdin from Pseudomonas putida BTP1 and its relation to the biogenetic pathway leading to pyoverdins. Z Naturforsch 50c:622–629 · doi:10.1515/znc-1995-9-1005
- Jülich M, Taraz K, Budzikiewicz H, Geoffroy V, Meyer JM, Gardan L (2001) The structure of the pyoverdin isolated from various Pseudomonas syringae pathovars. Z Naturforsch 56c:687–694 · DOI
- Koedam N, Wittouck E, Gaballa A, Gillis A, Höfte M, Cornelis P (1994) Detection and differentiation of microbial siderophores by isoelectric focusing and chrome azurol S overlay. BioMetals 7:287–291 · DOI
- Meyer J-M (2007) Siderotyping and bacterial taxonomy: a siderophore bank for a rapid identification at the species level of fluorescent and non-fluorescent Pseudomonas. In: Varma A, Chincholkar SB (eds) Soil biology, microbial siderophores, vol 12. Springer, Berlin Heidelberg, pp 43–66 · doi:10.1007/978-3-540-71160-5_2
- Meyer JM (2000) Pyoverdines: pigments, siderophores and potential taxonomic markers of fluorescent Pseudomonas species. Arch Microbiol 174:135–142 · DOI · Paper page
- Meyer JM, Geoffroy VA, Baida N, Gardan L, Izard D, Lemanceau P, Achouak W, Palleroni N (2002a) Siderophore typing, a powerful tool for the identification of fluorescent and non-fluorescent Pseudomonas. Appl Environ Microbiol 68:2745–2753 · DOI · Paper page
- Meyer JM, Geoffroy VA, Baysse C, Cornelis P, Barelmann I, Taraz K, Budzikiewicz H (2002b) Siderophore-mediated iron uptake in fluorescent Pseudomonas: characterization of the pyoverdine-receptor binding site of three cross-reacting pyoverdines. Arch Biochem Biophys 397:179–183 · DOI
- Meyer JM, Stintzi A, Coulanges V, Shivaji S, Voss JA, Taraz K, Budzikiewicz H (1998) Siderotyping of fluorescent pseudomonads: characterization of pyoverdines of Pseudomonas fluorescens and Pseudomonas putida strains from Antarctica. Microbiology 144:3119–3126 · DOI · Paper page
- Mohn G, Taraz K, Budzikiewicz H (1990) New pyoverdin-type siderophores from Pseudomonas fluorescens. Z Naturforsch 45b:1437–1450 · doi:10.1515/znb-1990-1014
- Ongena M, Jacques P, Thonart P, Gwose I, Fernandez DU, Schäfer M, Budzikiewicz H (2001) The pyoverdin of Pseudomonas fluorescens BTP2, a novel structural type. Tetrahedron Lett 42:5849–5851 · doi:10.1016/s0040-4039(01)01077-2
- Persmark M, Frejd T, Mattiasson B (1990) Purification, characterization, and structure of pseudobactin 589A, a siderophore from a plant growth promoting Pseudomonas. Biochemistry 29:7348–7356 · DOI
- Poppe K, Taraz K, Budzikiewicz H (1987) Pyoverdine type from Pseudomonas fluorescens. Tetrahedron 43:2261–2272 · doi:10.1016/s0040-4020(01)86810-1
- Ravel J, Cornelis P (2003) Genomics of pyoverdine-mediated iron uptake in pseudomonads. Trends Microbiol 11:195–200 · DOI · Paper page
- Roepstorff P, Fohlmann J (1984) Proposal for a common nomenclatur for sequence ions in mass spectra of peptides. Biomed Mass Spectrom 11:601 · DOI · Paper page
- Ruangviriyachai C, Barelmann I, Fuchs R, Budzikiewicz H (2000) An exceptionally large pyoverdin from a Pseudomonas strain collected in Thailand. Z Naturforsch 55c:323–327 · doi:10.1515/znc-2000-5-604
- Ruangviriyachai C, Fernandez DU, Fuchs R, Meyer JM, Budzikiewicz H (2001) A new pyoverdin from Pseudomonas aeruginosa R′. Z Naturforsch 56c:933–938 · doi:10.1515/znc-2001-11-1203
- Ruangviriyachai C, Uria-Fernandez D, Schäfer M, Budzikiewicz H (2004) Structure proposal for a new pyoverdin from a Thai Pseudomonas putida strain. Spectroscopy 18:453–458 · doi:10.1155/2004/394872
- Salah-el-Din ALM, Kyslic P, Stephan D, Abdallah MA (1997) Bacterial iron transport: structure elucidation by FAB-MS and by 2 D NMR (1H, 13C, 15N) of pyoverdin G4R, a peptidic siderophore produced by a nitrogen-fixing strain of Pseudomonas putida. Tetrahedron 53:12539–12552 · DOI
- Schäfer M, Fuchs R, Budzikiewicz H, Springer A, Meyer JM, Linscheid M (2006) Structure elucidation of cyclic pyoverdins and examination of rearrangement reactions in MS/MS experiments by determination of exact product ion masses. J Mass Spectrom 41:1162–1170 · doi:10.1002/jms.1068
- Schlegel K, Fuchs R, Schäfer M, Taraz K, Budzikiewicz H, Geoffroy V, Meyer JM (2001) The pyoverdins of Pseudomonas sp. 96-312 and 96-318. Z Naturforsch 56c:680–686 · doi:10.1515/znc-2001-9-1002
- Seinsche D, Taraz K, Budzikiewicz H, Gondol D (1993) Neue Pyoverdin-Siderophore aus Pseudomonas putida C. J Prakt Chem 335:157–168 · doi:10.1002/prac.19933350208
- Sultana R, Fuchs R, Schmickler H, Schlegel K, Budzikiewicz H, Siddiqui BS, Geoffroy V, Meyer JM (2000a) A pyoverdin from Pseudomonas sp. CFML 95-275. Z Naturforsch 55c:857–865 · doi:10.1515/znc-2000-11-1201
- Sultana R, Siddiqui BS, Taraz K, Budzikiewicz H, Meyer JM (2001b) An isopyoverdin from Pseudomonas putida CFML 90-33. Tetrahedron 57:1019–1023 · doi:10.1016/s0040-4020(00)01079-6
- Sultana R, Siddiqui BS, Taraz K, Budzikiewicz H, Meyer JM (2000b) A pyoverdine from Pseudomonas putida CFML 90-51 with a Lys ε-amino link in the peptide chain. BioMetals 13:147–152 · doi:10.1023/a:1009212729408
- Sultana R, Siddiqui BS, Taraz K, Budzikiewicz H, Meyer JM (2001a) An isopyoverdin from Pseudomonas putida CFML 90-44. Z Naturforsch 56c:303–307 · doi:10.1515/znc-2001-3-422
- Tappe R, Taraz K, Budzikiewicz H, Meyer JM, Lefèvre JF (1993) Structure elucidation of a pyoverdin produced by Pseudomonas aeruginosa ATCC 27853. J Prakt Chem 335:83–87 · doi:10.1002/prac.19933350113
- Teintze M, Hossain MB, Barnes CL, Leong J, van der Helm D (1981) Structure of ferric pseudobactin, a siderophore from a plant growth promoting Pseudomonas. Biochemistry 20: 6446–6457 · DOI · Paper page
- Uría-Fernández D, Fuchs R, Schäfer M, Budzikiewicz H, Meyer JM (2003a) The pyoverdin of Pseudomonas fluorescens G173, a novel structural type accompanied by unexpected natural derivatives of the corresponding ferribactin. Z Naturforsch 58c:1–10 · doi:10.1515/znc-2003-1-201
- Uría-Fernández D, Geoffroy V, Schäfer M, Meyer JM, Budzikiewicz H (2003b) Structure revision of pyoverdines produced by plant-growth promoting and plant-deleterious Pseudomonas species. Monatsh Chem 134:1421–1431 · doi:10.1007/s00706-003-0065-6
- Voss J, Taraz K, Budzikiewicz H (1999) A pyoverdin from the Antarctica strain 51 W of Pseudomonas fluorescens. Z Naturforsch 54c:156–162 · doi:10.1515/znc-1999-3-403
- Vossen W, Taraz K (1999) Structure of the pyoverdine PVD 2908—a new pyoverdin from Pseudomonas sp. 2908. BioMetals 12:323–329 · DOI
- Weber M, Taraz K, Budzikiewicz H, Geoffroy V, Meyer JM (2000) The structure of a pyoverdine from Pseudomonas sp. CFML 96.188 and its relation to other pyoverdines with a cyclic C-terminus. BioMetals 13:301–309 · doi:10.1023/a:1009235421503
- Wong-Lun-Sang S, Bernardini JJ, Hennard C, Kyslic P, Dell A, Abdallah MA (1996) Bacterial siderophores: structure elucidation, 2 D 1H and 13C NMR assignments of pyoverdins produced by Pseudomonas fluorescens CHA0. Tetrahedron Lett 37:3329–3332 · DOI
Cited by
Bacterial siderophores in community and host interactions
Kramer, J., Özkaya, Ö., & Kümmerli, R. (2020) · Nature Reviews Microbiology · doi:10.1038/s41579-019-0284-4 · Cited by 998
Long-term social dynamics drive loss of function in pathogenic bacteria
Andersen, S. B., Marvig, R. L., Molin, S., Krogh Johansen, H., & Griffin, A. S. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1508324112 · Cited by 168
Characterization of microbial siderophores by mass spectrometry
Pluháček, T., Lemr, K., Ghosh, D., Milde, D., Novák, J., & Havlíček, V. (2016) · Mass Spectrometry Reviews · doi:10.1002/mas.21461 · Cited by 74
David, S. R., & Geoffroy, V. A. (2020) · Microorganisms · doi:10.3390/microorganisms8121870 · Cited by 23
David, S. R., Ihiawakrim, D., Regis, R., & Geoffroy, V. A. (2020) · Journal of Hazardous Materials · doi:10.1016/j.jhazmat.2020.122532 · Cited by 16
Metadata
- Authors
- Meyer, J.-M., Gruffaz, C., Raharinosy, V., Bezverbnaya, I., Schäfer, M., & Budzikiewicz, H.
- Venue
- BioMetals
- Published
- 2007-09-11
- Volume
- 21
- Issue
- 3
- Pages
- 259-271
- ISSN
- 0966-0844
- 1572-8773
- Cited by
- 117
- References
- 0
- Language
- en
- Licence
- www.springer.com/tdm (tdm)
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Siderotyping of fluorescent Pseudomonas: molecular mass determination by mass spectrometry as a powerful pyoverdine siderotyping method. https://app.cochat.ai/papers/10.1007/s10534-007-9115-6
- The paper
- Meyer, J.-M., Gruffaz, C., Raharinosy, V., Bezverbnaya, I., Schäfer, M., & Budzikiewicz, H. (2008). Siderotyping of fluorescent Pseudomonas: molecular mass determination by mass spectrometry as a powerful pyoverdine siderotyping method. BioMetals. https://doi.org/10.1007/s10534-007-9115-6
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.