Precision of protein aggregation measurements by sedimentation velocity analytical ultracentrifugation in biopharmaceutical applications
Abstract
Sedimentation velocity analytical ultracentrifugation (SV-AUC) is routinely applied in biopharmaceutical development to measure levels of protein aggregation in protein products. SV-AUC is free from many limitations intrinsic to size exclusion chromatography (SEC) such as mobile phase and column interaction effects on protein self-association. Despite these clear advantages, SV-AUC exhibits lower precision measurements than corresponding measurements by SEC. The precision of SV-AUC is influenced by numerous factors, including sample characteristics, cell alignment, centerpiece quality, and data analysis approaches. In this study, we evaluate the precision of SV-AUC in its current practice utilizing a multilaboratory, multiproduct intermediate precision study. We then explore experimental approaches to improve SV-AUC measurement precision, with emphasis on utilization of high quality centerpieces.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
AUC is limited to purified samples without residual impurities or excipients and requires prior titration into the linear range 2 × 10^12-5 × 10^12 cp/mL.
“Sensitivity of the detectors and the risk of induced density gradients limit AUC to purified samples without residual impurities or excipients, and prior titration into the small linear range of the detector, 2 × 1012–5 × 1012 cp/mL, is needed.”
From Analytical methods for process and product characterization of recombinant adeno-associated virus-based gene therapies (2021) · cites this paper as [52]
Cites
Schuck, P. (2000) · Biophysical Journal · doi:10.1016/s0006-3495(00)76713-0 · Cited by 3,868 · see citing works
Maximum Likelihood Approaches to Variance Component Estimation and to Related Problems
Harville, D. A. (1977) · Journal of the American Statistical Association · doi:10.1080/01621459.1977.10480998 · Cited by 2,667 · see citing works
Contributions to Probability and Statistics: Essays in Honor of Harold Hotelling.
David, F. N., Olkin, I., Ghurye, S. G., Hoeffding, W., Madow, W. G., & Mann, H. B. (1961) · Journal of the Royal Statistical Society Series A (General) · doi:10.2307/2984135 · Cited by 1,914 · see citing works
Design and Analysis of Experiments
(2001) · Technometrics · doi:10.1198/tech.2001.s605 · Cited by 1,272 · see citing works
Modern analytical ultracentrifugation in protein science: A tutorial review
Lebowitz, J., Lewis, M. S., & Schuck, P. (2002) · Protein Science · doi:10.1110/ps.0207702 · Cited by 789 · see citing works
Schuck, P., Perugini, M. A., Gonzales, N. R., et al. (2002) · Biophysical Journal · doi:10.1016/s0006-3495(02)75469-6 · Cited by 699 · see citing works
Macromolecular Size-and-Shape Distributions by Sedimentation Velocity Analytical Ultracentrifugation
Brown, P. H., & Schuck, P. (2006) · Biophysical Journal · doi:10.1529/biophysj.106.081372 · Cited by 523 · see citing works
Modern Analytical Ultracentrifugation
(1994) · Birkhäuser Boston eBooks · doi:10.1007/978-1-4684-6828-1 · Cited by 290 · see citing works
MODERN APPLICATIONS OF ANALYTICAL ULTRACENTRIFUGATION
Laue, T. M., & Stafford, W. F. (1999) · Annual Review of Biophysics and Biomolecular Structure · doi:10.1146/annurev.biophys.28.1.75 · Cited by 261 · see citing works
Is any measurement method optimal for all aggregate sizes and types?
Philo, J. S. (2006) · The AAPS Journal · doi:10.1208/aapsj080365 · Cited by 245 · see citing works
Liu, J., Andya, J. D., & Shire, S. J. (2006) · The AAPS Journal · doi:10.1208/aapsj080367 · Cited by 202 · see citing works
Gabrielson, J. P., Brader, M. L., Pekar, A. H., Mathis, K. B., Winter, G., Carpenter, J. F., & Randolph, T. W. (2006) · Journal of Pharmaceutical Sciences · doi:10.1002/jps.20760 · Cited by 176 · see citing works
Self-citationRole of analytical ultracentrifugation in assessing the aggregation of protein biopharmaceuticals
Berkowitz, S. A. (2006) · The AAPS Journal · doi:10.1208/aapsj080368 · Cited by 137 · see citing works
On Charge and Specific Ion Effects on Sedimentation in the Ultracentrifuge
Pedersen, K. O. (1958) · The Journal of Physical Chemistry · doi:10.1021/j150568a028 · Cited by 109 · see citing works
Pekar, A. H., & Sukumar, M. (2007) · Analytical Biochemistry · doi:10.1016/j.ab.2007.04.035 · Cited by 83 · see citing works
Schuck, P. (2004) · Biophysical Chemistry · doi:10.1016/j.bpc.2003.10.016 · Cited by 80 · see citing works
Gabrielson, J. P., Randolph, T. W., Kendrick, B. S., & Stoner, M. R. (2006) · Analytical Biochemistry · doi:10.1016/j.ab.2006.11.012 · Cited by 59 · see citing works
Self-citationArthur, K. K., Gabrielson, J. P., Kendrick, B. S., & Stoner, M. R. (2009) · Journal of Pharmaceutical Sciences · doi:10.1002/jps.21654 · Cited by 58 · see citing works
Self-citationGabrielson, J. P., Arthur, K. K., Kendrick, B. S., Randolph, T. W., & Stoner, M. R. (2008) · Journal of Pharmaceutical Sciences · doi:10.1002/jps.21403 · Cited by 46 · see citing works
Self-citationSchuck, P. (2004) · Biophysical Chemistry · doi:10.1016/j.bpc.2003.10.017 · Cited by 41 · see citing works
Brown, P. H., Balbo, A., & Schuck, P. (2008) · The AAPS Journal · doi:10.1208/s12248-008-9058-z · Cited by 38 · see citing works
Analytical Ultracentrifugation and its use in Biotechnology
Shire, S. J. (1994) · Birkhäuser Boston eBooks · doi:10.1007/978-1-4684-6828-1_15 · Cited by 24 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Strategies for the assessment of protein aggregates in pharmaceutical biotech product development
den Engelsman, J., Garidel, P., Smulders, R., Koll, H., Smith, B., Bassarab, S., Seidl, A., Hainzl, O., & Jiskoot, W. (2011) · Pharmaceutical Research · doi:10.1007/s11095-010-0297-1 · Cited by 348 · see citing works
Gimpel, A. L., Katsikis, G., Sha, S., Maloney, A. J., Hong, M. S., Nguyen, T. N. T., Wolfrum, J., Springs, S. L., Sinskey, A. J., Manalis, S. R., et al. (2021) · Molecular Therapy - Methods & Clinical Development · doi:10.1016/j.omtm.2021.02.010 · Cited by 185 · see citing works
- Authors
- Gabrielson, J. P., Arthur, K. K., Stoner, M. R., Winn, B. C., Kendrick, B. S., Razinkov, V., Svitel, J., Jiang, Y., Voelker, P. J., Fernandes, C. A., & Ridgeway, R.
- Affiliations
- Amgen (United States) (US)
- Corresponding author
- Gabrielson, John P.
- ORCID
- Kendrick, Brent S.
- Venue
- Analytical Biochemistry
- Publisher
- Elsevier BV
- Published
- 2010-01
- Volume
- 396
- Issue
- 2
- Pages
- 231-241
- ISSN
- 0003-2697 (ISSN-L)
- OpenAlex
- W2047565601
- Cited by
- 56
- References
- 22
- Citations by year
- 2026: 1 · 2025: 5 · 2024: 5 · 2023: 3 · 2022: 1 · 2021: 2 · 2020: 3 · 2019: 4 · 2018: 3 · 2017: 3 · 2016: 4 · 2015: 7 · 2014: 3 · 2013: 3 · 2012: 4
- FWCI
- 1.20
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Analytical Biochemistry (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Amgen
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein purification and stability
- Life Sciences › Immunology and Microbiology › Immunology › Biosimilars and Bioanalytical Methods
- Physical Sciences › Chemistry › Analytical Chemistry › Analytical Methods in Pharmaceuticals
- Keywords
- protein aggregation, measurement precision, intermediate precision, cell alignment, biopharmaceutical products, protein self-association
- MeSH terms
- Chromatography, Gel, Protein Binding, Protein Conformation, Proteins, Ultracentrifugation
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review