Ibudilast enhances the clearance of SOD1 and TDP-43 aggregates through TFEB-mediated autophagy and lysosomal biogenesis: The new molecular mechanism of ibudilast and its implication for neuroprotective therapy
Abstract
A key feature of amyotrophic lateral sclerosis (ALS) and other neurodegenerative disorders including Alzheimer disease (AD), Parkinson disease (PD) and Huntington's disease (HD) is abnormal aggregation and deposition of misfolded proteins. Previous studies have shown that autophagy plays an important role in the clearance of disease-linked protein aggregates. In the current study, we report that ibudilast, which is a non-selective inhibitor of phosphodiesterases (PDEs) and an anti-inflammation drug, can induce autophagy and lysosomal biogenesis through mammalian target of rapamycin complex 1 - transcription factor EB (mTORC1-TFEB) signaling. We have found that ibudilast significantly enhances the clearance of disease-linked TAR DNA binding protein (TDP-43) and superoxide dismutase 1 (SOD1) protein aggregates in transfected cellular models carrying corresponding gene mutations. The mechanistic study revealed that ibudilast could markedly enhance TFEB nuclear translocation and increase the autolysosomes by inhibiting mTORC1 activity. We have also demonstrated that ibudilast could protect TDP-43-induced cytotoxicity in motor neuron-like NSC-34 cells. Collectively, our study identifies ibudilast as an autophagy enhancer and provides insights into the molecular basis of ibudilast for the potential treatment of several neurodegenerative disorders.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Ibudilast induces autophagy by promoting TFEB activity, which enhances clearance of TARDBP aggregates and reduces cytotoxicity.
“the phosphodiesterase inhibitor ibudilast induces autophagy by promoting TFEB activity, which enhances clearance of TARDBP aggregates and reduces cytotoxicity [360].”
From Autophagy and ALS: mechanistic insights and therapeutic implications (2022) · cites this paper as [360]
Cites
The role of autophagy in neurodegenerative disease
Nixon, R. A. (2013) · Nature Medicine · doi:10.1038/nm.3232 · Cited by 2,059 · see citing works
Converging Mechanisms in ALS and FTD: Disrupted RNA and Protein Homeostasis
Ling, S.-C., Polymenidou, M., & Cleveland, D. W. (2013) · Neuron · doi:10.1016/j.neuron.2013.07.033 · Cited by 1,811 · see citing works
Dissection of Autophagosome Formation Using Apg5-Deficient Mouse Embryonic Stem Cells
Mizushima, N., Yamamoto, A., Hatano, M., Kobayashi, Y., Kabeya, Y., Suzuki, K., Tokuhisa, T., Ohsumi, Y., & Yoshimori, T. (2001) · The Journal of Cell Biology · doi:10.1083/jcb.152.4.657 · Cited by 1,361 · see citing works
Inflammation in neurodegenerative diseases
Amor, S., Puentes, F., Baker, D., & Van Der Valk, P. (2010) · Immunology · doi:10.1111/j.1365-2567.2009.03225.x · Cited by 1,355 · see citing works
Aggregation and Motor Neuron Toxicity of an ALS-Linked SOD1 Mutant Independent from Wild-Type SOD1
Bruijn, L. I., Houseweart, M. K., Kato, S., Anderson, K. L., Anderson, S., Ohama, E., Reaume, A. G., Scott, R. W., & Cleveland, D. W. (1998) · Science · doi:10.1126/science.281.5384.1851 · Cited by 1,231 · see citing works
TDP-43 and FUS/TLS: emerging roles in RNA processing and neurodegeneration
Lagier-Tourenne, C., Polymenidou, M., & Cleveland, D. W. (2010) · Human Molecular Genetics · doi:10.1093/hmg/ddq137 · Cited by 1,021 · see citing works
Methods for monitoring autophagy
Mizushima, N. (2004) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2004.02.005 · Cited by 884 · see citing works
Mauvezin, C., & Neufeld, T. P. (2015) · Autophagy · doi:10.1080/15548627.2015.1066957 · Cited by 796 · see citing works
Protein aggregation diseases: pathogenicity and therapeutic perspectives
Aguzzi, A., & O’Connor, T. (2010) · Nature Reviews Drug Discovery · doi:10.1038/nrd3050 · Cited by 750 · see citing works
What is the role of protein aggregation in neurodegeneration?
Ross, C. A., & Poirier, M. A. (2005) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm1742 · Cited by 604 · see citing works
Aberrant cleavage of TDP-43 enhances aggregation and cellular toxicity
Zhang, Y., Xu, Y.-F., Cook, C. N., Gendron, T. F., Roettges, P. S., Link, C. D., Lin, W.-L., Tong, J., Castanedes‐Casey, M., Ash, P. E. A., et al. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0900688106 · Cited by 604 · see citing works
An Autophagic Flux Probe that Releases an Internal Control
Kaizuka, T., Morishita, H., Hama, Y., Tsukamoto, S., Matsui, T., Toyota, Y., Kodama, A., Ishihara, T., Mizushima, T., & Mizushima, N. (2016) · Molecular Cell · doi:10.1016/j.molcel.2016.09.037 · Cited by 580 · see citing works
Misfolded CuZnSOD and amyotrophic lateral sclerosis
Valentine, J. S., & Hart, P. J. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0730423100 · Cited by 546 · see citing works
Puertollano, R., Ferguson, S. M., Brugarolas, J., & Ballabio, A. (2018) · The EMBO Journal · doi:10.15252/embj.201798804 · Cited by 519 · see citing works
Toxicity of Familial ALS-Linked SOD1 Mutants from Selective Recruitment to Spinal Mitochondria
Liu, J., Lillo, C., Jonsson, P. A., Velde, C. V., Ward, C. M., Miller, T. M., Subramaniam, J. R., Rothstein, J. D., Marklund, S. L., Andersen, P. M., et al. (2004) · Neuron · doi:10.1016/j.neuron.2004.06.016 · Cited by 506 · see citing works
Pasinelli, P., Belford, M. E., Lennon, N. J., Bacskai, B. J., Hyman, B. T., Trotti, D., & Brown, R. H. (2004) · Neuron · doi:10.1016/j.neuron.2004.06.021 · Cited by 506 · see citing works
Autophagy and Its Possible Roles in Nervous System Diseases, Damage and Repair
Rubinsztein, D. C., DiFiglia, M., Heintz, N., Nixon, R. A., Qin, Z., Ravikumar, B., Stefanis, L., & Tolkovsky, A. M. (2005) · Autophagy · doi:10.4161/auto.1.1.1513 · Cited by 424 · see citing works
McDonald, K. K., Aulas, A., Destroismaisons, L., Pickles, S. R., Beleac, E., Camu, W., Rouleau, G. A., & Velde, C. V. (2011) · Human Molecular Genetics · doi:10.1093/hmg/ddr021 · Cited by 394 · see citing works
Multi-functional drugs for various CNS targets in the treatment of neurodegenerative disorders
Youdim, M. B. H., & Buccafusco, J. J. (2004) · Trends in Pharmacological Sciences · doi:10.1016/j.tips.2004.11.007 · Cited by 382 · see citing works
Igaz, L. M., Kwong, L. K., Chen‐Plotkin, A. S., Winton, M. J., Unger, T. L., Xu, Y., Neumann, M., Trojanowski, J. Q., & Lee, V. M. ‐. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m809462200 · Cited by 357 · see citing works
Understanding the role of TDP-43 and FUS/TLS in ALS and beyond
Da Cruz, S., & Cleveland, D. W. (2011) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2011.05.029 · Cited by 351 · see citing works
Protein kinase C controls lysosome biogenesis independently of mTORC1
Li, Y., Xu, M., Ding, X., Chen, Y., Song, Z., Chen, L., Huang, X., Wang, X., Jian, Y., Tang, G., et al. (2016) · Nature Cell Biology · doi:10.1038/ncb3407 · Cited by 348 · see citing works
Self-citationTreatment of multiple sclerosis — success from bench to bedside
Tintoré, M., Vidal‐Jordana, Á., & Sastre‐Garriga, J. (2018) · Nature Reviews Neurology · doi:10.1038/s41582-018-0082-z · Cited by 344 · see citing works
Choi, J., Rees, H. D., Weintraub, S. T., Levey, A. I., Chin, L., & Li, L. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m414327200 · Cited by 290 · see citing works
Phase 2 Trial of Ibudilast in Progressive Multiple Sclerosis
Fox, R. J., Coffey, C. S., CONWIT, R. A., Cudkowicz, M., Gleason, T., Goodman, A. D., Klawiter, E. C., Matsuda, K., McGovern, M. M., Naismith, R. T., et al. (2018) · New England Journal of Medicine · doi:10.1056/nejmoa1803583 · Cited by 285 · see citing works
TDP-43 functions and pathogenic mechanisms implicated in TDP-43 proteinopathies
Cohen, T. J., Lee, V. M. ‐., & Trojanowski, J. Q. (2011) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2011.06.004 · Cited by 271 · see citing works
Mizuno, T., Kurotani, T., Komatsu, Y., Kawanokuchi, J., Kato, H., Mitsuma, N., & Suzumura, A. (2003) · Neuropharmacology · doi:10.1016/j.neuropharm.2003.09.009 · Cited by 228 · see citing works
TDP-43 and FUS: a nuclear affair
Dormann, D., & Haass, C. (2011) · Trends in Neurosciences · doi:10.1016/j.tins.2011.05.002 · Cited by 214 · see citing works
Degradation of TDP-43 and its pathogenic form by autophagy and the ubiquitin-proteasome system
Wang, X., Fan, H., Ying, Z., Li, B., Wang, H., & Wang, G. (2010) · Neuroscience Letters · doi:10.1016/j.neulet.2009.11.055 · Cited by 207 · see citing works
Self-citationTDP‐43 loss of function increases TFEB activity and blocks autophagosome–lysosome fusion
Xia, Q., Wang, H., Hao, Z., Fu, C., Hu, Q., Gao, F., Ren, H., Chen, D., Han, J., Ying, Z., et al. (2016) · The EMBO Journal · doi:10.15252/embj.201591998 · Cited by 195 · see citing works
Self-citationAmyotrophic lateral sclerosis, frontotemporal dementia and beyond: the TDP-43 diseases
Geser, F., Martinez‐Lage, M., Kwong, L. K., Lee, V. M. ‐., & Trojanowski, J. Q. (2009) · Journal of Neurology · doi:10.1007/s00415-009-5069-7 · Cited by 190 · see citing works
Wang, C., Niederstrasser, H., Douglas, P. M., Lin, R., Jaramillo, J., Li, Y., Oswald, N. W., Zhou, A., McMillan, E. A., Mendiratta, S., et al. (2017) · Nature Communications · doi:10.1038/s41467-017-02332-3 · Cited by 156 · see citing works
Gp78, an ER associated E3, promotes SOD1 and ataxin-3 degradation
Ying, Z., Wang, H., Fan, H., Zhu, X., Zhou, J., Fei, E., & Wang, G. (2009) · Human Molecular Genetics · doi:10.1093/hmg/ddp380 · Cited by 126 · see citing works
Self-citationSuzumura, A., Ito, A., Yoshikawa, M., & Sawada, M. (1999) · Brain Research · doi:10.1016/s0006-8993(99)01666-2 · Cited by 121 · see citing works
Autophagy and antigen presentation
Münz, C. (2006) · Cellular Microbiology · doi:10.1111/j.1462-5822.2006.00714.x · Cited by 90 · see citing works
Wang, H., Ying, Z., & Wang, G. (2012) · Journal of Biological Chemistry · doi:10.1074/jbc.m111.299990 · Cited by 74 · see citing works
Self-citationTan, K.-P., Ho, M., Cho, H.-C., Yu, J., Hung, J., & Yu, A. L.-T. (2016) · Cell Death and Disease · doi:10.1038/cddis.2016.243 · Cited by 66 · see citing works
Fox, R., Coffey, C., Cudkowicz, M., Gleason, T. L., Goodman, A., Klawiter, E., Matsuda, K., McGovern, M. M., Conwit, R., Naismith, R., et al. (2016) · Contemporary Clinical Trials · doi:10.1016/j.cct.2016.08.009 · Cited by 64 · see citing works
Effect of Ibudilast: A Novel Antiasthmatic Agent, on Airway Hypersensitivity in Bronchial Asthma
Kawasaki, A., Hoshino, K., Oosaki, R., Mizushima, Y., & Yano, S. (1992) · Journal of Asthma · doi:10.3109/02770909209048938 · Cited by 58 · see citing works
Toxicity of ALS-Linked SOD1 Mutants
Williamson, T. L., Corson, L., Huang, L., Burlingame, A. L., Liu, J., Bruijn, L. I., & Cleveland, D. W. (2000) · Science · doi:10.1126/science.288.5465.399a · Cited by 50 · see citing works
Yung, C., Di, S., Li, L., & Chin, L. (2015) · Molecular Neurobiology · doi:10.1007/s12035-015-9537-z · Cited by 45 · see citing works
MEDAWAR, P. B. (1991) · Scandinavian Journal of Immunology · doi:10.1111/j.1365-3083.1991.tb01779.x · Cited by 25 · see citing works
Qin, X., Wang, G., Wang, H., Hu, Q., & Ying, Z. (2015) · Human Molecular Genetics · doi:10.1093/hmg/ddv450 · Cited by 20 · see citing works
Self-citationSyndromes parkinsoniens et sclérose latérale amyotrophique
Forestier, N. L., Lacomblez, L., & Meininger, V. (2008) · Revue Neurologique · doi:10.1016/j.neurol.2008.02.043 · Cited by 3 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Autophagy and ALS: mechanistic insights and therapeutic implications
Chua, J. P., De Calbiac, H., Kabashi, E., & Barmada, S. J. (2022) · Autophagy · doi:10.1080/15548627.2021.1926656 · Cited by 189 · see citing works
“phosphodiesterase inhibitor ibudilast induces autophagy by promoting TFEB activity, which enhances clearance of TARDBP aggregates and reduces cytotoxicity [360].”
Background
- Authors
- Chen, Y., Wang, H., Ying, Z., & Gao, Q.
- Affiliations
- Tianjin University (CN)
- Soochow University (CN)
- Corresponding author
- Ying, Zheng
- Gao, Qingzhi
- Venue
- Biochemical and Biophysical Research Communications
- Publisher
- Elsevier BV
- Published
- 2020-05
- Volume
- 526
- Issue
- 1
- Pages
- 231-238
- ISSN
- 0006-291X (ISSN-L)
- OpenAlex
- W3012688546
- Cited by
- 63
- References
- 44
- Citations by year
- 2026: 8 · 2025: 5 · 2024: 7 · 2023: 10 · 2022: 14 · 2021: 14 · 2020: 5
- FWCI
- 4.65
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Biochemical and Biophysical Research Communications (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Natural Science Foundation of China
- Topics
- Health Sciences › Medicine › Neurology › Amyotrophic Lateral Sclerosis Research
- Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
- Health Sciences › Medicine › Physiology › Alzheimer's disease research and treatments
- Keywords
- ibudilast, TDP-43 aggregates, autophagy, lysosomal biogenesis, TFEB, mTORC1, protein aggregate clearance, neurodegenerative diseases, amyotrophic lateral sclerosis, neuroprotection, phosphodiesterase inhibitors, motor neuron toxicity
- MeSH terms
- Neuroprotection, Autophagosomes, Superoxide Dismutase-1, Mechanistic Target of Rapamycin Complex 1, Amyotrophic Lateral Sclerosis, Autophagy, Cell Nucleus, DNA-Binding Proteins, Humans, Indolizines, Lysosomes, Membrane Fusion, Pyrazoles, Pyridines, Cell Death, Neuroprotective Agents, Protein Transport, Basic Helix-Loop-Helix Leucine Zipper Transcription Factors, HEK293 Cells, Protein Aggregates
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review