The cohesin release factor WAPL restricts chromatin loop extension

Haarhuis, Judith H.I., van der Weide, Robin H., Blomen, Vincent A., Yáñez-Cuna, J. Omar, Amendola, Mario, van Ruiten, Marjon S., Krijger, Peter H.L., Teunissen, Hans +5 more·2017·Cell

Cited by (806)

Items 401–500 of 806

  1. Induction of a chromatin boundary in vivo upon insertion of a TAD border
    Andréa Willemin, Lucille Lopez‐Delisle, Christopher Chase Bolt, Marie-Laure Gadolini, Denis Duboule, Eddie Rodríguez-Carballo · 2021 · PLoS Genetics
  2. Controlling gene activation by enhancers through a drug-inducible topological insulator
    Taro Tsujimura, Osamu Takase, Masahiro Yoshikawa, Etsuko Sano, Matsuhiko Hayashi, Kazuto Hoshi, Tsuyoshi Takato, Atsushi Toyoda, Hideyuki Okano, Keiichi Hishikawa · 2020 · eLife
  3. Mutations of PDS5 genes enhance TAD-like domain formation in Arabidopsis thaliana
    Anna-Maria Göbel, Sida Zhou, Zhidan Wang, Sofia Tzourtzou, Axel Himmelbach, Shiwei Zheng, Mónica Pradillo, Chang Liu, Hua Liang Jiang · 2024 · Nature Communications
  4. A common molecular mechanism underlying Cornelia de Lange and CHOPS syndromes
    Toyonori Sakata, Shoin Tei, Kosuke Izumi, Ian D. Krantz, Masashige Bando, Katsuhiko Shirahige · 2025 · Current Biology
  5. Organization of replicated chromosomes by DNA loops and sister chromatid cohesion
    Fena Ochs, Daniel W. Gerlich · 2026 · Nature Reviews Molecular Cell Biology
  6. Multiomic analysis of cohesin reveals that ZBTB transcription factors contribute to chromatin interactions
    Rui Wang, Qi-Qin Xu, Chenlu Wang, Kai Tian, Hui Wang, Xiong Ji · 2023 · Nucleic Acids Research
  7. The 3D Genome Shapes the Regulatory Code of Developmental Genes
    Julien Mozziconacci, Mélody Merle, Annick Lesne · 2019 · Journal of Molecular Biology
  8. Toward precise CRISPR DNA fragment editing and predictable 3D genome engineering
    Qiang Wu, Jia Shou · 2020 · Journal of Molecular Cell Biology
  9. A Cohesin Traffic Pattern Genetically Linked to Gene Regulation
    Anne-Laure Valton, Job Dekker, Sergey V. Venev, Barbara Mair, Eraj Shafiq Khokhar, Athma A. Pai, Jason Moffat · 2021 · HAL
  10. The histone H4 lysine 20 demethylase DPY-21 regulates the dynamics of condensin DC binding
    Laura Breimann, Ana Karina Morao, Jun Kim, David Sebastian Jimenez, Nina Maryn, Krishna Bikkasani, Michael J. Carrozza, Sarah Elizabeth Albritton, Maxwell Kramer, Lena Annika Street et al. · 2021 · Journal of Cell Science
  11. MaxHiC: A robust background correction model to identify biologically relevant chromatin interactions in Hi-C and capture Hi-C experiments
    Hamid Alinejad‐Rokny, Rassa Ghavami Modegh, Hamid Reza Rabiee, Ehsan Ramezani Sarbandi, Narges Rezaie, Kin Tung Tam, Alistair R. R. Forrest · 2022 · PLoS Computational Biology
  12. MoDLE: high-performance stochastic modeling of DNA loop extrusion interactions
    Roberto Rossini, Vipin Kumar, Anthony Mathelier, Torbjørn Rognes, Jonas Paulsen · 2022 · bioRxiv
  13. Multi-Dimensional Gene Regulation in Innate and Adaptive Lymphocytes: A View From Regulomes
    Nilisha Fernando, Giuseppe Sciumè, John J. O’Shea, Han‐Yu Shih · 2021 · Frontiers in Immunology
  14. Principles of Meiotic Chromosome Assembly
    S. Schalbetter, G. Fudenberg, J. Baxter, K. Pollard, M. Neale · 2018 · bioRxiv
  15. RNA polymerase II is required for spatial chromatin reorganization following exit from mitosis
    Shu Zhang, Nadine Übelmesser, Natasa Josipovic, G. Forte, J. Slotman, M. Chiang, H. Gothe, E. Gusmao, C. Becker, J. Altmuller et al. · 2020 · bioRxiv
  16. A cohesin traffic pattern genetically linked to gene regulation
    Anne-Laure Valton, Sergey V. Venev, Barbara Mair, Eraj Shafiq Khokhar, Amy H. Y. Tong, Matej Ušaj, Katherine S. K. Chan, Athma A. Pai, Jason Moffat, Job Dekker · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  17. Cis-Regulatory Control of Mammalian Sex Determination
    Meshi Ridnik, Stefan Schoenfelder, Nitzan Gonen · 2021 · Sexual Development
  18. Molecular mechanism and functional significance of Wapl interaction with the Cohesin complex
    Xueying Yuan, Lu Yan, Qinfu Chen, Shukai Zhu, Xinyu Zhou, Linghui Zeng, Mingjie Liu, Xiaojing He, Jun Huang, Weiguo Lü et al. · 2024 · Proceedings of the National Academy of Sciences
  19. Interplay between cohesin and RNA polymerase II in regulating chromatin interactions and gene transcription
    Minji Kim, Ping Wang, Patricia A. Clow, Eli Chien, Xiaotao Wang, Jianhao Peng, Haoxi Chai, Xiyuan Liu, Byoungkoo Lee, Chew Yee Ngan et al. · 2026 · Nature Structural & Molecular Biology
  20. A (3D-Nuclear) Space Odyssey: Making Sense of Hi-C Maps
    Irene Mota-Gómez, Darío G. Lupiáñez · 2019 · Genes
  21. Functional impact of cancer-associated cohesin variants on gene expression and cellular identity
    Natalie Rittenhouse, Zachary M. Carico, Ying Frances Liu, Holden C. Stefan, Nicole L. Arruda, Junjie Zhou, Jill M. Dowen · 2021 · Genetics
  22. Characteristics of Cohesin Mutation in Acute Myeloid Leukemia and Its Clinical Significance
    Caixia Han, Xuefeng Gao, Yonghui Li, Juan Zhang, Erna Yang, Li Zhang, Li Yu · 2021 · Frontiers in Oncology
  23. Deciphering the Complexity of 3D Chromatin Organization Driving Lymphopoiesis and Lymphoid Malignancies
    Laurianne Scourzic, Eralda Salataj, Effie Apostolou · 2021 · Frontiers in Immunology
  24. The two waves in single-cell 3D genomics
    Sergey V. Ulianov, Sergey V. Razin · 2021 · Seminars in Cell and Developmental Biology
  25. Analysis of high-resolution 3D intrachromosomal interactions aided by Bayesian network modeling
    Xizhe Zhang, Sergio Branciamore, Grigoriy Gogoshin, Andréi S. Rodin, Arthur D. Riggs · 2017 · Proceedings of the National Academy of Sciences
  26. Non-Coding RNA Mediated Regulation of Allogeneic T Cell Responses After Hematopoietic Transplantation
    Daniel Peltier, Pavan R. Reddy · 2018 · Frontiers in Immunology
  27. An RB-Condensin II Complex Mediates Long-Range Chromosome Interactions and Influences Expression at Divergently Paired Genes
    Aren E. Marshall, Charles A. Ishak, Frederick A. Dick · 2019 · Molecular and Cellular Biology
  28. Architectural proteins for the formation and maintenance of the 3D genome
    Mengfan Li, Jingbo Gan, Yuao Sun, Zihan Xu, Junsheng Yang, Yujie Sun, Cheng Li · 2020 · Science China Life Sciences
  29. CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains
    Hui Huang, Quan-Sheng Zhu, Adam P. Jussila, Yuanyuan Han, Bogdan Bintu, Colin Kern, Mattia Conte, Yan-Xiao Zhang, Simona Bianco, A. Chiariello et al. · 2020 · bioRxiv
  30. Telomere protein arrays stall DNA loop extrusion by condensin
    Brian T. Analikwu, A. Deshayes, J. van der Torre, Thomas M. Guérin, A. Katan, Claire Béneut, R. Barth, Jamie Phipps, V. Scolari, Xavier Veaute et al. · 2023 · bioRxiv
  31. Emerging roles of cohesin-STAG2 in cancer
    Julia S. Scott, Loubna Al Ayadi, Emmanouela Epeslidou, Roan H van Scheppingen, Anna Mukha, Lucas J. T. Kaaij, Catrin Lutz, Stefan Preković · 2024 · Oncogene
  32. Characterization of induced cohesin loop extrusion trajectories in living cells
    Ruiqi Han, Yike Huang, Michelle J. Robers, Mikhail D. Magnitov, Iwan Vaandrager, Amin Allahyar, Marjon J.A.M. Verstegen, Kexin Zhang, Elzo de Wit, Wouter L. de Laat et al. · 2025 · Nature Genetics
  33. Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia
    Willem K. Smits, Carlo Vermeulen, Rico Hagelaar, Shunsuke Kimura, Eric M. Vroegindeweij, Jessica G. C. A. M. Buijs-Gladdines, Ellen van de Geer, Marjon J.A.M. Verstegen, Erik Splinter, Simon V. van Reijmersdal et al. · 2023 · Cell Reports
  34. Shifting landscapes: the role of 3D genomic organizations in gene regulatory strategies
    Jenks Hehmeyer, François Spitz, Heather Q. Marlow · 2023 · Current Opinion in Genetics & Development
  35. A non-canonical role of the inner kinetochore in regulating sister-chromatid cohesion at centromeres
    Lu Yan, Xueying Yuan, Mingjie Liu, Qinfu Chen, Miao Zhang, Junfen Xu, Linghui Zeng, Long Zhang, Jun Huang, Weiguo Lü et al. · 2024 · The EMBO Journal
  36. A Subset of Transposable Elements as Mechano-Response Enhancer Elements in Controlling Human Embryonic Stem Cell Fate
    Tongyu Sun, Yue-Yuan Xu, Nicole Angel, Lu-Na Chen, Kan Zhang, B. Hoffman, Jianhong Ou, Zhipeng Meng, Shyni Varghese, Ya-Rui Diao · 2025 · Nature Cell Biology
  37. Two CTCF motifs impede cohesin-mediated DNA loop extrusion
    Roman Barth, Richard Janissen, Laura Muras, Jaco van der Torre, Gabriele Litos, Eli O. van der Sluis, Ashmiani van den Berg, Iain F. Davidson, Jan‐Michael Peters, Cees Dekker · 2025 · Molecular Cell
  38. Predictive Polymer Models for 3D Chromosome Organization
    Michael Chiang, Giada Forte, Nick Gilbert, Davide Marenduzzo, Chris A. Brackley · 2020 · Methods in molecular biology
  39. Decoding the Equine Genome: Lessons from ENCODE
    Sichong Peng, Jessica L. Petersen, Rebecca R. Bellone, Ted Kalbfleisch, Nicole B. Kingsley, Alexa M Barber, Eleonora Cappelletti, Elena Giulotto, Carrie J. Finno · 2021 · Genes
  40. A de novo Transcription-Dependent TAD Boundary Underpins Critical Multiway Interactions During Antibody Class Switch Recombination
    Julia Costea, Ursula E. Schoeberl, Daniel Malzl, Maximilian von der Linde, Johanna Fitz, Ankit Gupta, Marina Makharova, Anton A. Goloborodko, Rushad Pavri · 2022 · Molecular Cell
  41. GRHL2 and AP2a coordinate early surface ectoderm lineage commitment during development
    Ann Collier, Samantha N. Piekos, Angela Liu, Jillian M. Pattison, Franco Felix, Alessandro A. Bailetti, Egor Sedov, Sadhana Gaddam, Hanson Hui Zhen, Anthony E. Oro · 2023 · iScience
  42. Through the lens of phase separation: intrinsically unstructured protein and chromatin looping
    Ling Cai, Gang Greg Wang · 2023 · Nucleus
  43. At the Crossroad of Gene Regulation and Genome Organization: Potential Roles for ATP-Dependent Chromatin Remodelers in the Regulation of CTCF-Mediated 3D Architecture
    Aktan Alpsoy, Surbhi Sood, Emily C. Dykhuizen · 2021 · Biology
  44. A streamlined cohesin apparatus is sufficient for mitosis and meiosis in the protist Tetrahymena
    Emine I. Ali, Josef Loidl, Rachel A. Howard-Till · 2018 · Chromosoma
  45. Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation
    Mayilaadumveettil Nishana, Caryn J. Ha, Javier Rodriguez-Hernaez, Ali Ranjbaran, Erica Chio, Elphège Pierre Nora, Sana Badri, Andreas Kloetgen, Benoit G. Bruneau, Aristotelis Tsirigos et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  46. Chromatin insulators in gene regulation and 3D genome organization
    Hina Sultana, Rohit Kunar, A. Gregory Matera · 2025 · Biochemical Society Transactions
  47. Deciphering the regulatory landscape of enhancer RNAs in health and disease
    Qian Wang, Peter ten Dijke, Chuannan Fan · 2026 · Signal Transduction and Targeted Therapy
  48. De novo formation of cis-regulatory contacts in the absence of NIPBL-driven chromatin loop extrusion
    Nicholas G. Aboreden, Han Zhao, Jin Yang, Fengnian Shan, Fuhai Liu, Anders S. Hansen, Haoyue Zhang, Gerd A. Blobel · 2026 · Nature Genetics
  49. PDS5 proteins control genome architecture by limiting the lifetime of cohesin-NIPBL complexes.
    G. Wutz, I. Davidson, E. Banigan, Roman R. Stocsits, Ryotaro Kawasumi, Wen Tang, Kota Nagasaka, Lorenzo Costantino, Ralf-Peter Jansen, Kouji Hirota et al. · 2026 · Molecules and Cells
  50. Integrative analysis of the 3D genome structure reveals that CTCF maintains the properties of mouse female germline stem cells
    Geng G. Tian, Xinyan Zhao, Changliang Hou, Wenhai Xie, Xiaoyong Li, Yinjuan Wang, Lijuan Wang, Hua Li, Xiaodong Zhao, Jing Li et al. · 2022 · Cellular and Molecular Life Sciences
  51. The role of heterochromatin in 3D genome organization during preimplantation development
    Franka J. Rang, Jop Kind, Isabel Misteli Guerreiro · 2023 · Cell Reports
  52. Genome folding by cohesin
    Shutao Qi, Zhubing Shi, Hongtao Yu · 2025 · Current Opinion in Genetics & Development
  53. Telomeres stall DNA loop extrusion by condensin.
    Brian T. Analikwu, A. Deshayes, J. van der Torre, Thomas M. Guérin, A. Katan, Claire Béneut, R. Barth, Jamie Phipps, Vittore Scolari, Xavier Veaute et al. · 2025 · Cell Reports
  54. Single Nucleotide Polymorphism Facilitated Down-Regulation of the Cohesin Stromal Antigen-1: Implications for Colorectal Cancer Racial Disparities
    Somenath Datta, Richard Sherva, Mart Dela Cruz, Michelle T. Long, Priya Roy, Vadim Backman, Sanjib Chowdhury, Hemant K. Roy · 2018 · Neoplasia
  55. Developing landscapes: genome architecture during early embryogenesis
    Robin H. van der Weide, Elzo de Wit · 2019 · Current Opinion in Genetics & Development
  56. LAST-seq: single-cell RNA sequencing by direct amplification of single-stranded RNA without prior reverse transcription and second-strand synthesis
    Jun Lyu, Chongyi Chen · 2023 · Genome biology
  57. Competent for commitment: you've got to have heart!
    Rajan Jain, Jonathan A. Epstein · 2018 · Genes & Development
  58. Detailed Regulatory Interaction Map of the Human Heart Facilitates Gene Discovery for Cardiovascular Disease
    Valerio Bianchi, Geert Geeven, Nathan R. Tucker, Catharina R.E. Hilvering, Amelia Weber Hall, Carolina Roselli, Matthew C. Hill, James F. Martin, Kenneth B. Margulies, Patrick T. Ellinor et al. · 2019 · SSRN Electronic Journal
  59. Exogenous chromosomes reveal how sequence composition drives chromatin assembly, activity, folding and compartmentalization
    Christophe Chapard, Léa Meneu, Jacques Serizay, Alex Westbrook, Etienne Routhier, Myriam Ruault, Amaury Bignaud, Agnès Thierry, Géraldine Gourgues, Carole Lartigue et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  60. Dynamic chromatin organization and regulatory interactions in human endothelial cell differentiation
    Kris G. Alavattam, Katie A. Mitzelfelt, Giancarlo Bonora, Paul Fields, Xiulan Yang, Han Sheng Chiu, Lil Pabon, Alessandro Bertero, Nathan J. Palpant, William Stafford Noble et al. · 2022 · Stem Cell Reports
  61. The material properties of mitotic chromosomes
    Maximilian F.D. Spicer, Daniel W. Gerlich · 2023 · Current Opinion in Structural Biology
  62. Chromosomal positioning and epigenetic architecture influence DNA methylation patterns triggered by galactic cosmic radiation
    Adrian Perdyan, Marcin Jąkalski, Monika Horbacz, Afshin Beheshti, Jakub Mieczkowski · 2024 · Scientific Reports
  63. SMC-mediated chromosome organization: Does loop extrusion explain it all?
    Tatsuya Hirano, Kazuhisa Kinoshita · 2024 · Current Opinion in Cell Biology
  64. Cohesin prevents local mixing of condensed euchromatic domains in living human cells
    Masa A. Shimazoe, Shiori Iida, Katsuhiko Minami, Koichi Higashi, Sachiko Tamura, Yoshiaki Kobayashi, Shin Fujishiro, Le Xiong, Kako Nakazato, S. S. Ashwin et al. · 2026 · Nature Genetics
  65. Meiotic cohesin RAD21L shapes 3D genome structure and transcription in the male germline
    Laia Marín-Gual, Covadonga Vara, Raquel Sainz-Urruela, Yasmina Cuartero, Lucía Álvarez-González, Natalia Felipe‐Medina, Francisca Garcia, Elena Llano, Marc A. Martı́-Renom, Alberto M. Pendás et al. · 2025 · Science Advances
  66. The physical chemistry of interphase loop extrusion
    Maxime M. C. Tortora, Geoffrey Fudenberg · 2025 · Cell Genomics
  67. Multi-layered transcriptional control of cranial neural crest development
    Ivan Candido-Ferreira, Martyna Lukoseviciute, Tatjana Sauka‐Spengler · 2022 · Seminars in Cell and Developmental Biology
  68. Cohesin controls X chromosome structure remodeling and X-reactivation during mouse iPSC-reprogramming
    Serena Generoso, Maria Victoria Neguembor, Elliot A. Hershberg, Ruslan I. Sadreyev, Kazuki Kurimoto, Yukihiro Yabuta, Raffaele Ricci, Pauline N. C. B. Audergon, Moritz Bauer, Mitinori Saitou et al. · 2023 · Proceedings of the National Academy of Sciences
  69. Karyotype engineering reveals spatio-temporal control of replication firing and gene contacts
    Luciana Lazar‐Stefanita, Jingchuan Luo, Rémi Montagne, Agnès Thierry, Xiaoji Sun, Guillaume Mercy, Julien Mozziconacci, Romain Koszul, Jef D. Boeke · 2022 · Cell Genomics
  70. Molecular mechanisms insulating proliferation from genotoxic stress in B lymphocytes
    Nathaniel Wright, Malay Mandal, Marcus R. Clark · 2023 · Trends in Immunology
  71. The N-terminus of Stag1 is required to repress the 2C program by maintaining rRNA expression and nucleolar integrity
    Dubravka Pezić, Samuel Weeks, Wazeer Varsally, Pooran Singh Dewari, Steven M. Pollard, Miguel Ramos Branco, Suzana Hadjur · 2023 · Stem Cell Reports
  72. Dysregulation of the cohesin subunit RAD21 by Hepatitis C virus mediates host–virus interactions
    Shira Perez, Michael Gevor, Ateret Davidovich, Antony Kaspi, Katreena Yamin, Tom Domovich, Tomer Meirson, Avi Matityahu, Yehuda Brody, Salomon Marcello Stemmer et al. · 2019 · Nucleic Acids Research
  73. Cis-regulatory chromatin contacts form de novo in the absence of loop extrusion
    Nicholas G. Aboreden, Han Zhao, Fengnian Shan, Fuhai Liu, Haoyue Zhang, Gerd A. Blobel · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  74. Permeable TAD boundaries and their impact on genome‐associated functions
    Li‐Hsin Chang, Daan Noordermeer · 2024 · BioEssays
  75. Cohesin positions the epigenetic reader Phf2 within the genome
    Wen Tang, Lorenzo Costantino, Roman R. Stocsits, Gordana Wutz, René Ladurner, Otto Hudecz, Karl Mechtler, Jan‐Michael Peters · 2025 · The EMBO Journal
  76. Physiological aging in three dimensions
    Fei Ma, Ranjan Sen · 2025 · Trends in Cell Biology
  77. Chromatin and aberrant enhancer activity in KMT2A rearranged acute lymphoblastic leukemia
    Thomas A. Milne · 2024 · Current Opinion in Genetics & Development
  78. STAG2 mutations regulate 3D genome organization, chromatin loops, and Polycomb signaling in glioblastoma multiforme
    Wanying Xu, Jung-Sik Kim, Tianyi Yang, Alvin Ya, Lisa Sadzewicz, Luke J. Tallon, Brent T. Harris, Jann Nagina Sarkaria, Fulai Jin, Todd A. Waldman · 2024 · Journal of Biological Chemistry
  79. Genome-wide mapping of binding sites of the transposase-derived SETMAR protein in the human genome
    Márton Miskei, Adrienn Horváth, Lívia Viola, Laura Varga, Éva Nagy, Orsolya Feró, Zsolt Karányi, Jason Roszik, Csaba Miskey, Zoltán Ivics et al. · 2021 · Computational and Structural Biotechnology Journal
  80. Multiple epigenetic factors co-localize with HMGN proteins in A-compartment chromatin
    Bing He, Iris Zhu, Yuri V. Postnikov, Takashi Furusawa, Lisa M. Miller Jenkins, Ravikanth Nanduri, Michael Bustin, David Landsman · 2022 · Epigenetics & Chromatin
  81. Toward understanding the dynamic state of 3D genome
    Soya Shinkai, Shuichi Onami, Ryuichiro Nakato · 2020 · Computational and Structural Biotechnology Journal
  82. PCNA promotes context-specific sister chromatid cohesion establishment separate from that of chromatin condensation
    Caitlin M. Zuilkoski, Robert V. Skibbens · 2020 · Cell Cycle
  83. PCNA antagonizes cohesin-dependent roles in genomic stability
    Caitlin M. Zuilkoski, Robert V. Skibbens · 2020 · PLoS ONE
  84. Building regulatory landscapes: enhancer recruits cohesin to create contact domains, engage CTCF sites and activate distant genes
    Rinzema, Niels J., Sofiadis, Konstantinos, Tjalsma, Sjoerd J. D., Verstegen, Marjon J.A.M., Oz, Yuva, Valdes-Quezada, Christian, Felder, Anna-Karina, Filipovska, Teodora, van der Elst, Stefan, de Andrade dos Ramos, Zaria et al. · 2021
  85. Co-essentiality analysis identifies PRR12 as a cohesin interacting protein and contributor to genomic integrity
    2024
  86. ATM Regulation of the Cohesin Complex Is Required for Repression of DNA Replication and Transcription in the Vicinity of DNA Double-Strand Breaks
    Thomas E. Bass, Donald E. Fleenor, Paige E. Burrell, Michael B. Kastan · 2022 · Molecular Cancer Research
  87. Locus architecture and RAG scanning determine antibody diversity
    A. Kenter, Saurabh Priyadarshi, Ellen B. Drake · 2023 · Trends in immunology
  88. 3D genome organization and its study in livestock breeding
    Jie Cheng, Xiukai Cao, Shengxuan Wang, Jiaqiang Zhang, Binglin Yue, Xiaoyan Zhang, Yongzhen Huang, Xianyong Lan, Gang Ren, Hong Chen · 2023 · Journal of Integrative Agriculture
  89. Single-nucleus Hi-C of mammalian oocytes and zygotes
    Johanna Gassler, Ilya M. Flyamer, Kiku-e K. Tachibana · 2018 · Methods in cell biology
  90. Sensitivity of cohesin–chromatin association to high-salt treatment corroborates non-topological mode of loop extrusion
    Arkadiy K. Golov, Anastasia Golova, Alexey A. Gavrilov, Sergey V. Razin · 2021 · Epigenetics & Chromatin
  91. The CDK Pef1 and protein phosphatase 4 oppose each other for regulating cohesin binding to fission yeast chromosomes
    Adrien Birot, Marta Tormos-Pérez, Sabine Vaur, Amélie Feytout, Julien Jaegy, Dácil Alonso Gil, Stéphanie Vazquez, Karl Ekwall, Jean‐Paul Javerzat · 2020 · eLife
  92. Spatial orchestration of the genome: topological reorganisation during X-chromosome inactivation
    Alexandra Martitz, Edda G. Schulz · 2024 · Current Opinion in Genetics & Development
  93. Three-dimensional genome organization in normal and malignant haematopoiesis
    Sergi Cuartero, Matthias Merkenschlager · 2018 · Current Opinion in Hematology
  94. Bifractal nature of chromosome contact maps
    Simone Pigolotti A, Mogens H. Jensen, Yinxiu Zhan, Guido Tiana · 2020 · Physical Review Research
  95. MACMIC Reveals a Dual Role of CTCF in Epigenetic Regulation of Cell Identity Genes
    Guangyu Wang, Bo Xia, Man Zhou, Jie Lv, Dongyu Zhao, Yanqiang Li, Yiwen Bu, Xin Wang, John P. Cooke, Qi Cao et al. · 2021 · Genomics Proteomics & Bioinformatics
  96. Author response: Scc2/Nipbl hops between chromosomal cohesin rings after loading
    James Rhodes, Davide Mazza, Kim Nasmyth, Stephan Uphoff · 2017 · eLife
  97. Topologically Associating Domain Boundaries are Commonly Required for Normal Genome Function
    Sudha Sunil Rajderkar, Iros Barozzi, Yiwen Zhu, Rong Hu, Yanxiao Zhang, Bin Li, Y. Fukuda, Guy Kelman, Adyam Akeza, Matthew J. Blow et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  98. High resolution maps of chromatin reorganization through mouse meiosis reveal novel features of the 3D meiotic structure
    Gang Cheng, Florencia Pratto, Kevin Brick, Xin Li, Benjamin Alleva, Mini Huang, Kwan-Wood Gabriel Lam, R. Daniel Camerini‐Otero · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  99. Dynamic barriers modulate cohesin positioning and genome folding at fixed occupancy
    Rahmaninejad, Hadi, Xiao, Yao, Tortora, Maxime M.C., Fudenberg, Geoffrey · 2025 · Genome Research
  100. Cohesin-mediated stabilization of the CCAN complex at kinetochores in mitosis
    Julian Haase, Koly Aktar, Mary Kate Bonner, Léonard Colin, Hindol Gupta, Briana E. Marinoni, David O. Morgan, Alexander E. Kelly · 2025 · Current Biology