The Energetics and Physiological Impact of Cohesin Extrusion

Cited by (586)

Items 301–400 of 586

  1. Structure-function relationships of SMC protein complexes for DNA loop extrusion
    Hansol Lee, Haemin Noh, Je‐Kyung Ryu · 2021 · Korean Society for Structural Biology
  2. Utilization of Host Cell Chromosome Conformation by Viral Pathogens: Knowing When to Hold and When to Fold
    Kinjal Majumder, Abigail J. Morales · 2021 · Frontiers in Immunology
  3. C-InterSecture—a computational tool for interspecies comparison of genome architecture
    Miroslav Nuriddinov, Veniamin Fishman · 2019 · Bioinformatics
  4. A Comparative Study of Supervised Machine Learning Algorithms for the Prediction of Long-Range Chromatin Interactions
    Thomas Vanhaeren, Federico Divina, Miguel García-Torres, Francisco Gómez-Vela, Wim Vanhoof, Pedro Manuel Martínez‐García · 2020 · Genes
  5. A common molecular mechanism underlying Cornelia de Lange and CHOPS syndromes
    Toyonori Sakata, Shoin Tei, Kosuke Izumi, Ian D. Krantz, Masashige Bando, Katsuhiko Shirahige · 2025 · Current Biology
  6. Cohesin stabilization at promoters and enhancers by common transcription factors and chromatin regulators
    Audra F. Bryan, Megan Justice, Alexis V. Stutzman, Daniel J. McKay, Jill M. Dowen · 2025 · Epigenetics & Chromatin
  7. RNA-binding proteins mediate the maturation of chromatin topology during differentiation
    Bondita Dehingia, Małgorzata Milewska, Marcin Janowski, Mahmoud‐Reza Rafiee, Misbah Abbas, Aleksandra Piotrowska, Jan F. Senge, Piotr Blaut, Dietrich Walsh, Jacqueline Severino et al. · 2025 · Nature Cell Biology
  8. Seeing the forest through the trees: prioritising potentially functional interactions from Hi-C
    Ning Liu, Wai Yee Low, Hamid Alinejad‐Rokny, Stephen Pederson, Timothy J. Sadlon, Simon Charles Barry, James Breen · 2021 · Epigenetics & Chromatin
  9. Roles of G4-DNA and G4-RNA in Class Switch Recombination and Additional Regulations in B-Lymphocytes
    Ophélie Dézé, Brice Laffleur, Michel Cogné · 2023 · Molecules
  10. BORIS/CTCFL epigenetically reprograms clustered CTCF binding sites into alternative transcriptional start sites
    Elena M. Pugacheva, Dharmendra Nath Bhatt, Samuel Rivero-Hinojosa, Md Tajmul, Liron M. Fedida, Emma Price, Yon Ju Ji, Dmitri I. Loukinov, Alexander V. Strunnikov, Bing Ren et al. · 2024 · Genome biology
  11. Perspective on recent developments and challenges in regulatory and systems genomics
    Julia Zeitlinger, Sushmita Roy, Ferhat Ay, Anthony Mathelier, Alejandra Medina-Rivera, Shaun Mahony, Saurabh Kumar Sinha, Jason Ernst · 2024 · Bioinformatics Advances
  12. CTCF binding landscape is shaped by the epigenetic state of the N-terminal nucleosome in relation to CTCF motif orientation
    Md Tajmul, Dharmendra Nath Bhatt, Luminiţa Ruje, Emma Price, Yon Ju Ji, Dmitri I. Loukinov, Vladimir B. Teif, Victor V. Lobanenkov, Elena M. Pugacheva · 2025 · Nucleic Acids Research
  13. Panorama of stepwise involvement of the IgH 3′ regulatory region in murine B cells
    Charlotte Bruzeau, Jeanne Cook‐Moreau, Sandrine Le Noir, Eric Pinaud · 2021 · Advances in immunology
  14. The histone H4 lysine 20 demethylase DPY-21 regulates the dynamics of condensin DC binding
    Laura Breimann, Ana Karina Morao, Jun Kim, David Sebastian Jimenez, Nina Maryn, Krishna Bikkasani, Michael J. Carrozza, Sarah Elizabeth Albritton, Maxwell Kramer, Lena Annika Street et al. · 2021 · Journal of Cell Science
  15. MoDLE: high-performance stochastic modeling of DNA loop extrusion interactions
    Roberto Rossini, Vipin Kumar, Anthony Mathelier, Torbjørn Rognes, Jonas Paulsen · 2022 · bioRxiv
  16. The 3D genome: From fundamental principles to disease and cancer
    David Umlauf, Raphaël Mourad · 2018 · Seminars in Cell and Developmental Biology
  17. Multi-Dimensional Gene Regulation in Innate and Adaptive Lymphocytes: A View From Regulomes
    Nilisha Fernando, Giuseppe Sciumè, John J. O’Shea, Han‐Yu Shih · 2021 · Frontiers in Immunology
  18. CTCF Promotes Long-range Enhancer-promoter Interactions and Lineage-specific Gene Expression in Mammalian Cells
    Naoki Kubo, Haruhiko Ishii, Xiong Xiong, Simona Bianco, Franz Meitinger, Rong Hu, James D. Hocker, Mattia Conte, David U. Gorkin, Miao Yu et al. · 2020 · bioRxiv
  19. RNA polymerase II is required for spatial chromatin reorganization following exit from mitosis
    Shu Zhang, Nadine Übelmesser, Natasa Josipovic, G. Forte, J. Slotman, M. Chiang, H. Gothe, E. Gusmao, C. Becker, J. Altmuller et al. · 2020 · bioRxiv
  20. Nanoscale 3D DNA tracing in non-denatured cells resolves the Cohesin-dependent loop architecture of the genome in situ
    Beckwith, K. S., Ødegård-Fougner, Ø., Morero, N. R., Barton, C., Schueder, F., Tang, W., Alexander, S., Peters, J- M., Jungmann, R., Birney, E. et al. · 2025 · Nature Communications
  21. Polymer simulations guide the detection and quantification of chromatin loop extrusion by imaging
    Sabaté, Thomas, Lelandais, Benoît, Bertrand, Edouard, Zimmer, Christophe · 2023 · Nucleic Acids Research
  22. Understanding fundamental principles of enhancer biology at a model locus
    Mira T. Kassouf, Seren Ford, Joseph Blayney, Douglas R. Higgs · 2023 · BioEssays
  23. Interplay between cohesin and RNA polymerase II in regulating chromatin interactions and gene transcription
    Minji Kim, Ping Wang, Patricia A. Clow, Eli Chien, Xiaotao Wang, Jianhao Peng, Haoxi Chai, Xiyuan Liu, Byoungkoo Lee, Chew Yee Ngan et al. · 2026 · Nature Structural & Molecular Biology
  24. A (3D-Nuclear) Space Odyssey: Making Sense of Hi-C Maps
    Irene Mota-Gómez, Darío G. Lupiáñez · 2019 · Genes
  25. Biology and Physics of Heterochromatin-Like Domains/Complexes
    Prim B. Singh, Stepan N. Belyakin, Petr P. Laktionov · 2020 · Cells
  26. A modified protocol of Capture-C allows affordable and flexible high-resolution promoter interactome analysis
    Arkadiy K. Golov, Dmitrii A. Abashkin, Nikolay V. Kondratyev, Sergey V. Razin, Alexey A. Gavrilov, Вера Евгеньевна Голимбет · 2020 · Scientific Reports
  27. The Interplay of Transcription and Genome Topology Programs T Cell Development and Differentiation
    Xin Zhao, Shaoqi Zhu, Weiqun Peng, Hai‐Hui Xue · 2022 · The Journal of Immunology
  28. Chromosome compaction and chromatin stiffness enhance diffusive loop extrusion by slip-link proteins
    A. Bonato, C. A. Brackley, J. Johnson, D. Michieletto, D. Marenduzzo · 2020 · Soft Matter
  29. The regulatory landscape of the Dlx gene system in branchial arches: Shared characteristics among Dlx bigene clusters and evolution
    Kenta Sumiyama, Akira Tanave · 2020 · Development Growth & Differentiation
  30. CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains
    Hui Huang, Quan-Sheng Zhu, Adam P. Jussila, Yuanyuan Han, Bogdan Bintu, Colin Kern, Mattia Conte, Yan-Xiao Zhang, Simona Bianco, A. Chiariello et al. · 2020 · bioRxiv
  31. DNA methylation insulates genic regions from CTCF loops near nuclear speckles
    Shelby A Roseman, Allison P. Siegenfeld, Ceejay Lee, Nicholas Z. Lue, Amanda L. Waterbury, Brian B. Liau · 2024 · eLife
  32. Characterization of induced cohesin loop extrusion trajectories in living cells
    Ruiqi Han, Yike Huang, Michelle J. Robers, Mikhail D. Magnitov, Iwan Vaandrager, Amin Allahyar, Marjon J.A.M. Verstegen, Kexin Zhang, Elzo de Wit, Wouter L. de Laat et al. · 2025 · Nature Genetics
  33. Shifting landscapes: the role of 3D genomic organizations in gene regulatory strategies
    Jenks Hehmeyer, François Spitz, Heather Q. Marlow · 2023 · Current Opinion in Genetics & Development
  34. Predicting gene expression state and prioritizing putative enhancers using 5hmC signal
    Edahí González‐Avalos, Atsushi Onodera, Daniela Samaniego‐Castruita, Anjana Rao, Ferhat Ay · 2024 · Genome biology
  35. Condensin loop extrusion properties, roadblocks, and role in homology search during recombination in S. cerevisiae
    Vinciane Piveteau, Chloé Dupont, Hossein Salari, Agnès Dumont, Jérôme Savocco, Daniel Jost, Aurèle Piazza · 2026 · The EMBO Journal
  36. Cohesin-Mediated Chromatin Interactions and Autoimmunity
    Venkataragavan Chandrasekaran, N. Yu. Oparina, María-José García-Bonete, Caroline Wasén, Malin C. Erlandsson, Eric Malmhäll-Bah, Karin Andersson, Maja Jensen, Sofia Töyrä Silfverswärd, Gergely Katona et al. · 2022 · Frontiers in Immunology
  37. A global high-density chromatin interaction network reveals functional long-range and trans-chromosomal relationships
    Ruchi Lohia, Nathan Fox, Jesse Gillis · 2022 · Genome biology
  38. A de novo Transcription-Dependent TAD Boundary Underpins Critical Multiway Interactions During Antibody Class Switch Recombination
    Julia Costea, Ursula E. Schoeberl, Daniel Malzl, Maximilian von der Linde, Johanna Fitz, Ankit Gupta, Marina Makharova, Anton A. Goloborodko, Rushad Pavri · 2022 · Molecular Cell
  39. Long-Range Control of Class Switch Recombination by Transcriptional Regulatory Elements
    Audrey Dauba, Ahmed Amine Khamlichi · 2021 · Frontiers in Immunology
  40. Epigenetics, Enhancer Function and 3D Chromatin Organization in Reprogramming to Pluripotency
    Andreas Hörnblad, Silvia Remeseiro · 2022 · Cells
  41. CTCF is a DNA-tension-dependent barrier to cohesin-mediated DNA loop extrusion
    I. Davidson, R. Barth, M. Zaczek, J. van der Torre, Wen Tang, Kota Nagasaka, R. Janissen, J. Kerssemakers, G. Wutz, C. Dekker et al. · 2022 · bioRxiv
  42. Chromatin insulators in gene regulation and 3D genome organization
    Hina Sultana, Rohit Kunar, A. Gregory Matera · 2025 · Biochemical Society Transactions
  43. PDS5 proteins control genome architecture by limiting the lifetime of cohesin-NIPBL complexes
    Gordana Wutz, Iain F. Davidson, Edward J. Banigan, Roman R. Stocsits, Ryotaro Kawasumi, Wen Tang, Kota Nagasaka, Lorenzo Costantino, Ralf Jansen, Kouji Hirota et al. · 2026 · Molecular Cell
  44. Intra- and interchromosomal contact mapping reveals the Igh locus has extensive conformational heterogeneity and interacts with B-lineage genes
    Olga Mielczarek, Carolyn H. Rogers, Yinxiu Zhan, Louise S. Matheson, Michael J. T. Stubbington, Stefan Schoenfelder, Daniel J. Bolland, Biola M. Javierre, Steven Wingett, Csilla Várnai et al. · 2023 · Cell Reports
  45. Locus folding mechanisms determine modes of antigen receptor gene assembly
    Brittney M. Allyn, Katharina E. Hayer, Clément Oyeniran, Vincent K. Nganga, Kyutae David Lee, Bikash Mishra, Ahmet Saçan, Eugene M. Oltz, Craig H. Bassing · 2023 · The Journal of Experimental Medicine
  46. Genome folding by cohesin
    Shutao Qi, Zhubing Shi, Hongtao Yu · 2025 · Current Opinion in Genetics & Development
  47. Remodeling the chromatin landscape in T lymphocytes by a division of labor among transcription factors
    Golnaz Vahedi · 2021 · Immunological Reviews
  48. 3D chromatin structures precede genome activation in Drosophila embryogenesis
    Gabriel A. Dolsten, Evan M. Cofer, Xinyang Bing, Benjamin J. Brack, Marcus Curlin, Chandra L. Theesfeld, Olga G. Troyanskaya, Michael Levine, Yuri Pritykin · 2025 · Cell Genomics
  49. Chromosomal domain formation by archaeal SMC, a roadblock protein, and DNA structure
    2025
  50. Inner workings of gene folding
    Michele Di Pierro · 2019 · Proceedings of the National Academy of Sciences
  51. Mini-review: Gene regulatory network benefits from three-dimensional chromatin conformation and structural biology
    Xiusheng Zhu, Qitong Huang, Jing Luo, Dashuai Kong, Yubo Zhang · 2023 · Computational and Structural Biotechnology Journal
  52. LoopSage: An energy-based Monte Carlo approach for the loop extrusion modeling of chromatin
    Sevastianos Korsak, Dariusz Plewczyński · 2024 · Methods
  53. Location, location, location: nuclear structure regulates gene expression in neurons
    Emily Brookes, Antonella Riccio · 2019 · Current Opinion in Neurobiology
  54. Cohesin and CTCF complexes mediate contacts in chromatin loops depending on nucleosome positions
    Aymen Attou, Tilo Zülske, Gero Wedemann · 2022 · Biophysical Journal
  55. Molecular mechanisms insulating proliferation from genotoxic stress in B lymphocytes
    Nathaniel Wright, Malay Mandal, Marcus R. Clark · 2023 · Trends in Immunology
  56. Regulating epithelial-mesenchymal plasticity from 3D genome organization
    Qing You Pang, Yi-Chia Chiu, Ruby Yun‐Ju Huang · 2024 · Communications Biology
  57. Permeable TAD boundaries and their impact on genome‐associated functions
    Li‐Hsin Chang, Daan Noordermeer · 2024 · BioEssays
  58. DKK1-SE recruits AP1 to activate the target gene DKK1 thereby promoting pancreatic cancer progression
    Lan Shao, Haoran Yu, Mengyun Wang, Lu Chen, Boshu Ji, Tong Qing Wu, Xiangqi Teng, Mu Su, Xiao Han, Weikai Shi et al. · 2024 · Cell Death and Disease
  59. Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues
    Miao Yu, Nathan R. Zemke, Ziyin Chen, Ivan Jurić, Rong Hu, Ramya Raviram, Armen Abnousi, Rongxin Fang, Yanxiao Zhang, David U. Gorkin et al. · 2024 · Nature Structural & Molecular Biology
  60. Deciphering histone mark-specific fine-scale chromatin organization at high resolution with Micro-C-ChIP
    Mariia Metelova, Maria Louisa Vigh, Nils Krietenstein · 2025 · Nature Communications
  61. VEGFA’s distal enhancer regulates its alternative splicing in CML
    Sara Dahan, Aveksha Sharma, Klil Cohen, Mai Baker, Nadeen Taqatqa, Mercedes Bentata, Eden Engal, Ahmad Siam, Gillian Kay, Yotam Drier et al. · 2021 · NAR Cancer
  62. Three-Dimensional Genome Organization in Breast and Gynecological Cancers: How Chromatin Folding Influences Tumorigenic Transcriptional Programs
    Stephanie I. Núñez-Olvera, Jonathan Puente-Rivera, Rosalío Ramos‐Payán, Carlos Pérez‐Plasencia, Yarely M. Salinas-Vera, Lorena Aguilar‐Arnal, César López‐Camarillo · 2021 · Cells
  63. Association between Triplex-Forming Sites of Cardiac Long Noncoding RNA GATA6-AS1 and Chromatin Organization
    Benjamin Soibam · 2022 · Non-Coding RNA
  64. A chronicle review of new techniques that facilitate the understanding and development of optimal individualized therapeutic strategies for chordoma
    Chenglong Zhao, Tao Tan, E. Zhang, Ting Wang, Haiyi Gong, Qi Jia, Tielong Liu, Xinghai Yang, Jian Zhao, Zhipeng Wu et al. · 2022 · Frontiers in Oncology
  65. A Lightweight Framework For Chromatin Loop Detection at the Single‐Cell Level
    Fuzhou Wang, Hamid Alinejad‐Rokny, Jiecong Lin, Tingxiao Gao, Xingjian Chen, Zetian Zheng, Lingkuan Meng, Xiangtao Li, Ka‐Chun Wong · 2023 · Advanced Science
  66. Novel orthogonal methods to uncover the complexity and diversity of nuclear architecture
    Sjoerd J. D. Tjalsma, Wouter L. de Laat · 2020 · Current Opinion in Genetics & Development
  67. The 3D chromatin landscape of rhabdomyosarcoma
    Meng Wang, Prethish Sreenivas, Benjamin D. Sunkel, Long Wang, Myron S. Ignatius, Benjamin Z. Stanton · 2023 · NAR Cancer
  68. Cohesin chromatin loop formation by an extrinsic motor
    Thomas M Guérin, Christopher Barrington, Georgii E. Pobegalov, Maxim I. Molodtsov, Frank Uhlmann · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  69. Building regulatory landscapes: enhancer recruits cohesin to create contact domains, engage CTCF sites and activate distant genes
    Rinzema, Niels J., Sofiadis, Konstantinos, Tjalsma, Sjoerd J. D., Verstegen, Marjon J.A.M., Oz, Yuva, Valdes-Quezada, Christian, Felder, Anna-Karina, Filipovska, Teodora, van der Elst, Stefan, de Andrade dos Ramos, Zaria et al. · 2021
  70. RNA processing mechanisms contribute to genome organization and stability in B cells
    Emma Miglierina, Delfina Ordanoska, Sandrine Le Noir, Brice Laffleur · 2024 · Oncogene
  71. HiCDiffusion - diffusion-enhanced, transformer-based prediction of chromatin interactions from DNA sequences
    Mateusz Chiliński, Dariusz Plewczyński · 2024 · BMC Genomics
  72. Mapping the 3D genome architecture
    Ghazaleh Tavallaee, Elias Orouji · 2024 · Computational and Structural Biotechnology Journal
  73. Spontaneously directed loop extrusion in SMC complexes emerges from broken detailed balance and anisotropic DNA search
    Andrea Bonato, Ja‐June Jang, Do‐Gyun Kim, Kyoung-Wook Moon, Davide Michieletto, Je‐Kyung Ryu · 2025 · Nucleic Acids Research
  74. Epigenetic priming promotes tyrosine kinase inhibitor resistance and oncogene amplification
    Rebecca M. Starble, Eric G. Sun, Rana Gbyli, Jonathan S. D. Radda, Jiuwei Lu, Tyler B Jensen, Ning Sun, Nelli Khudaverdyan, Ting Sheng Zhao, Bomiao Hu et al. · 2025 · Nature Structural & Molecular Biology
  75. Lineage-determining transcription factors constrain cohesin to drive multi-enhancer oncogene regulation
    Yeqiao Zhou, Atishay Jay, Noah G. Burget, Tobias Friedrich, Sora Yoon, Jessica Alsing, Guy Nir, Rudolf Grosschedl, Golnaz Vahedi, Robert B. Faryabi · 2025 · Nature Cell Biology
  76. ATM Regulation of the Cohesin Complex Is Required for Repression of DNA Replication and Transcription in the Vicinity of DNA Double-Strand Breaks
    Thomas E. Bass, Donald E. Fleenor, Paige E. Burrell, Michael B. Kastan · 2022 · Molecular Cancer Research
  77. Locus architecture and RAG scanning determine antibody diversity
    A. Kenter, Saurabh Priyadarshi, Ellen B. Drake · 2023 · Trends in immunology
  78. Single-molecule imaging reveals a direct role of CTCF’s zinc fingers in SA interaction and cluster-dependent RNA recruitment
    Jonas Huber, Nicoleta-Loredana Tanasie, Sarah Zernia, Johannes Stigler · 2024 · Nucleic Acids Research
  79. Loop extrusion drives very different dynamics for Rouse chains in bulk solutions and at interfaces
    Tetsuya Yamamoto, Takahiro Sakaue, Helmut Schießel · 2019 · Europhysics Letters (EPL)
  80. Rice RS2‐9, which is bound by transcription factor OSH1, blocks enhancer–promoter interactions in plants
    Huawei Liu, Li Jiang, Zhifeng Wen, Yingjun Yang, Stacy D. Singer, Dennis Bennett, Wenying Xu, Zhen Su, Zhifang Yu, Jonathan Cohn et al. · 2021 · The Plant Journal
  81. A genome-wide nucleosome-resolution map of promoter-centered interactions in human cells corroborates the enhancer-promoter looping model
    Arkadiy K. Golov, Alexey A. Gavrilov, Noam Kaplan, Sergey V. Razin · 2024 · eLife
  82. Repair of programmed DNA lesions in antibody class switch recombination: common and unique features
    Yafang Shang, Fei‐Long Meng · 2021 · Genome Instability & Disease
  83. Quantifying phase separation property of chromatin associated proteins under physiological conditions using anti-1,6-hexanediol index
    Minglei Shi, Kaiqiang You, Taoyu Chen, Chao Hou, Zhengyu Liang, Mingwei Liu, Jifeng Wang, Taotao Wei, Jun Qin, Yang Chen et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  84. Gene Clusters Reveal Fundamental Principles of Genome Folding and Transcriptional Regulation
    Alex R. Buckley, Carlo Vetralla, Daniele Canzio · 2025 · Annual Review of Cell and Developmental Biology
  85. Cohesin-Dependent Loop Extrusion: Molecular Mechanics and Role in Cell Physiology
    Arkadiy K. Golov, Alexey A. Gavrilov · 2024 · Biochemistry (Moscow)
  86. ISWI chromatin remodeling complexes recruit NSD2 and H3K36me2 in pericentromeric heterochromatin
    Naoki Gotō, Kazuma Suke, Nao Yonezawa, Hidenori Nishihara, Tetsuya Handa, Yuko Sato, Tomoya Kujirai, Hitoshi Kurumizaka, Kazuo Yamagata, Hiroshi Kimurâ · 2024 · The Journal of Cell Biology
  87. Pushing the TAD boundary: Decoding insulator codes of clustered CTCF sites in 3D genomes
    Haiyan Huang, Qiang Wu · 2024 · BioEssays
  88. FISHnet: detecting chromatin domains in single-cell sequential Oligopaints imaging data
    Rohan V. Patel, Kenneth Pham, Harshini Chandrashekar, Jennifer E. Phillips‐Cremins · 2025 · Nature Methods
  89. Loss of synergistic transcriptional feedback loops drives diverse B-cell cancers
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  90. Genome Topology Control of Antigen Receptor Gene Assembly
    Brittney M. Allyn, Kyutae David Lee, Craig H. Bassing · 2020 · The Journal of Immunology
  91. Skeletal and gene-regulatory functions of nuclear sex steroid hormone receptors
    Akira Hayakawa, Tomohiro Kurokawa, Yoshiaki Kanemoto, Takahiro Sawada, Jinichi Mori, Shigeaki Kato · 2022 · Journal of Bone and Mineral Metabolism
  92. Transcription-Driven Translocation of Cohesive and Non-Cohesive Cohesin In Vivo
    Melinda S. Borrie, Paul M. Kraycer, Marc R. Gartenberg · 2023 · Molecular and Cellular Biology
  93. Dynamical properties of chromatin provide insights into key folding principles
    Sangram Kadam, Soudamini Sahoo, Pretam Kumar, Ranjith Padinhateeri · 2025 · Biophysical Journal
  94. The mitotic STAG3–cohesin complex shapes male germline nucleome
    Masahiro Nagano, Bo Hu, Kosuke Ogata, Fumiya Umemura, Yukiko Ishikura, Shinnosuke Suzuki, Christos C. Katsifis, Masanori Yoshinaga, Gabriele Litos, Kota Nagasaka et al. · 2025 · Nature Structural & Molecular Biology
  95. BRWD1 orchestrates small pre-B cell chromatin topology by converting static to dynamic cohesin
    Malay Mandal, Mark Maienschein‐Cline, Yeguang Hu, Azam Mohsin, Margaret Veselits, Nathaniel Wright, Michael K. Okoreeh, Young me Yoon, Jacob Veselits, Katia Georgopoulos et al. · 2023 · Nature Immunology
  96. Analysis of long-range chromatin contacts, compartments and looping between mouse embryonic stem cells, lens epithelium and lens fibers
    Michael J. Camerino, William K. Chang, Aleš Cvekl · 2024 · Epigenetics & Chromatin
  97. An insulator that regulates chromatin extrusion and class switch recombination
    Kefei Yu · 2021 · Proceedings of the National Academy of Sciences
  98. Dual function of SF3B2 on chromatin and RNA to regulate transcription in head and neck squamous cell carcinoma
    Koji Kitamura, Hidefumi Suzuki, Ryota Abe, Hidenori Inohara, Yasufumi Kaneda, Hidehisa Takahashi, Keisuke Nimura · 2022 · Cell & Bioscience
  99. Inducible Protein Degradation to Understand Genome Architecture
    Alexi M Tallan, Benjamin Z. Stanton · 2021 · Biochemistry
  100. Enhancers as regulators of antigen receptor loci three-dimensional chromatin structure
    E. Mauricio Barajas-Mora, Ann J. Feeney · 2019 · Transcription