Molecular Architecture of the Mouse Nervous System

Zeisel, Amit, Hochgerner, Hannah, Lönnerberg, Peter, Johnsson, Anna, Memic, Fatima, van der Zwan, Job, Häring, Martin, Braun, Emelie +12 more·2018·Cell
DOI 10.1016/j.cell.2018.06.021

Cited by (2,708)

Items 1,701–1,800 of 2,708

  1. The age-related alerations in the enteric nervous system and their impact on peristalsis of the gastrointestinal tract
    Agata Szymaszkiewicz, Kamil Szymaszkiewicz, Jakub Fichna, Marta Zielińska · 2021 · Postępy Biochemii
  2. Effects of Sample Size on Plant Single-Cell RNA Profiling
    Hongyu Chen, Yang Lv, Xinxin Yin, Xi Chen, Qinjie Chu, Qian‐Hao Zhu, Longjiang Fan, Longbiao Guo · 2021 · Current Issues in Molecular Biology
  3. FlowGrid enables fast clustering of very large single-cell RNA-seq data
    Xiunan Fang, Joshua W. K. Ho · 2021 · Bioinformatics
  4. Mapping Angiopoietin1 Expression in the Developing and Adult Brain
    Xin Wei, Selin Jessa, Claudia L. Kleinman, Timothy N. Phoenix · 2021 · Developmental Neuroscience
  5. Interactions of the Neuro‒Immune‒Stromal Triad in Itch
    Pang‐Yen Tseng, Mark A. Hoon · 2021 · Journal of Investigative Dermatology
  6. Heterogeneity and Potency of Peripheral Glial Cells in Embryonic Development and Adults
    Artem Sinegubov, Daria Andreeva, Nikita Burzak, Maria Vasyutina, Lada A. Murashova, Vyacheslav A. Dyachuk · 2022 · Frontiers in Molecular Neuroscience
  7. Initial assessment of the spatial learning, reversal, and sequencing task capabilities of knock-in rats with humanizing mutations in the Aβ-coding region of App
    Pham, Hoa, Yin, Tao, D’Adamio, Luciano · 2022 · PLOS ONE
  8. Human hair follicle-derived mesenchymal stem cells promote tendon repair in a rabbit Achilles tendinopathy model
    Ying‐Yu Ma, Zhiwei Lin, Xiaoyi Chen · 2023 · Chinese Medical Journal
  9. A Carboxy-terminal Smarcb1 Point Mutation Induces Hydrocephalus Formation and Affects AP-1 and Neuronal Signalling Pathways in Mice
    Aliska K. Brugmans, Carolin Walter, Natalia Moreno, Carolin Göbel, Dörthe Holdhof, Flavia W. de Faria, Marc Hotfilder, Daniela Jeising, Michael Christoph Frühwald, Boris V. Skryabin et al. · 2023 · Cellular and Molecular Neurobiology
  10. Neural gut-to-brain communication for postprandial control of satiation and glucose metabolism
    Leonie Cabot, Juliet Erlenbeck-Dinkelmann, Henning Fenselau · 2023 · Journal of Endocrinology
  11. High-resolution omics of vascular ageing and inflammatory pathways in neurodegeneration
    Andrew John Kwok, Jianning Lu, Junzhe Huang, Bonaventure Yiu Ming Ip, Vincent Mok, H. M. Lai, Ho Ko · 2023 · Seminars in Cell and Developmental Biology
  12. Slitrk4 is required for the development of inhibitory neurons in the fear memory circuit of the lateral amygdala
    Yoshifumi Matsumoto, Hideki Miwa, Keiichi Katayama, Arata Watanabe, Kazuyuki Yamada, Takashi Ito, Shinsuke Nakagawa, Jun Aruga · 2024 · Frontiers in Molecular Neuroscience
  13. Accurate Identification of Spatial Domain by Incorporating Global Spatial Proximity and Local Expression Proximity
    Yuanyuan Yu, Yao He, Zhi Xie · 2024 · Biomolecules
  14. Interindividual Variation in Gut Nitrergic Neuron Density Is Regulated By GDNF Levels and ETV1
    Heikki T. Virtanen, Peyman Choopanian, L. Lauriina Porokuokka · 2024 · Cellular and Molecular Gastroenterology and Hepatology
  15. Detection of Mitotic Neuroblasts Provides Additional Evidence of Steady-State Neurogenesis in the Adult Small Intestinal Myenteric Plexus
    Anastazja M. Gorecki, Jared Slosberg, Su Min Hong, Philippa Seika, Srinivas N. Puttapaka, Blake Migden, Anton Gulko, Alpana Singh, Chengxiu Zhang, Rohin Gurumurthy et al. · 2025 · eNeuro
  16. Platelet‐derived growth factor receptor α/glial fibrillary acidic protein expressing peritumoral astrocytes associate with shorter median overall survival in glioblastoma patients
    Lina Wik Leiss, Alessandro Mega, Thomas Olsson Bontell, Monica Nistér, Anja Smits, Sara Corvigno, Mohummad Aminur Rahman, Per Øyvind Enger, Hrvoje Miletić, Arne Östman · 2019 · Glia
  17. Epigenetic mechanisms driving lineage commitment in mesenchymal stem cells
    Val Yianni, Paul Thomas Sharpe · 2020 · Bone
  18. Sphetcher: Spherical Thresholding Improves Sketching of Single-Cell Transcriptomic Heterogeneity
    Van Hoan Do, Khaled Elbassioni, Stefan Canzar · 2020 · iScience
  19. Developmental mechanisms underlying circuit wiring: Novel insights and challenges ahead
    Heike Blockus, Franck Polleux · 2021 · Current Opinion in Neurobiology
  20. New Insights in the Complexity and Functionality of the Neurovascular Unit
    Johanna Schaffenrath, Annika Keller · 2020 · Handbook of experimental pharmacology
  21. Properties and Differential Expression of H+ Receptors in Dorsal Root Ganglia: Is a Labeled-Line Coding for Acid Nociception Possible?
    Omar Páez, Pedro Segura‐Chama, Angélica Almanza · 2021 · Frontiers in Physiology
  22. Recent Developments and Applications of Single-Cell RNA Sequencing Technology in Cell Classification
    Safir Ullah Khan, Munir Ullah Khan · 2021 · Journal of Biomedical Research & Environmental Sciences
  23. Somatosensory neurons express specific sets of lincRNAs, and lincRNA CLAP promotes itch sensation in mice
    Bin Wang, Bowen Jiang, Guo‐Wei Li, Fei Dong, Z. David Luo, Bing Cai, Manyi Wei, Jiansong Huang, Kaikai Wang, Xin Feng et al. · 2022 · EMBO Reports
  24. New Insights on Extrinsic Innervation of the Enteric Nervous System and Non-neuronal Cell Types That Influence Colon Function
    Kimberly A. Meerschaert, Brian M. Davis, Kristen Smith · 2022 · Advances in experimental medicine and biology
  25. Endogenous neural stem cells characterization using omics approaches: Current knowledge in health and disease
    Valentina Murtaj, Erica Butti, Gianvito Martino, Paola Panina‐Bordignon · 2023 · Frontiers in Cellular Neuroscience
  26. Enhancing Student Research Experiences with Open Data from the Allen Brain Map
    Kaitlyn Casimo · 2022 · Journal of Undergraduate Neuroscience Education
  27. A reliable strategy for single-cell RNA sequencing analysis using cryoconserved primary cortical cells
    Lucia Verrillo, Eleonora Mangano, Denise Drongitis, Ivan Merelli A, Francesca Pischedda, Giovanni Piccoli, Clarissa Consolandi, Roberta Bordoni, Maria Giuseppina Miano · 2020 · Journal of Neuroscience Methods
  28. Single-cell transcriptional dynamics and origins of neuronal diversity in the developing mouse neocortex
    Ludovic Telley, Gulistan Agirman, Julien Prados, Sabine Fièvre, Polina Oberst, Ilaria Vitali, Laurent Nguyen, Alexandre G. Dayer, Denis Jabaudon · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  29. Single Cell Gene Expression Analysis Reveals Human Stem Cell-Derived Graft Composition in a Cell Therapy Model of Parkinson’s Disease
    Katarína Tiklová, Sara Nolbrant, Alessandro Fiorenzano, Åsa K. Björklund, Yogita Sharma, Andreas Heuer, Linda Gillberg, Deirdre B. Hoban, Tiago Cardoso, Andrew F. Adler et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  30. Microglia control small vessel calcification via TREM2
    Yvette Zarb, Sucheta Sridhar, S. Nassiri, Sebastian G. Utz, Johanna Schaffenrath, Upasana Maheshwari, E. Rushing, K. Nilsson, M. Delorenzi, M. Colonna et al. · 2019 · Science Advances
  31. Integrating barcoded neuroanatomy with spatial transcriptional profiling reveals cadherin correlates of projections shared across the cortex
    Yu-Chi Sun, Xiaoyin Chen, Stephan Fischer, Shaina Lu, Jesse A Gillis, Anthony M. Zador · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  32. Time-resolved single-cell RNAseq profiling identifies a novel Fabp5 -expressing subpopulation of inflammatory myeloid cells in chronic spinal cord injury
    Regan Hamel, Luca Peruzzotti‐Jametti, Katherine Ridley, Veronica Testa, Bryan Yu, David H. Rowitch, John C. Marioni, Stefano Pluchino · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  33. Luminal nutrients activate distinct patterns in submucosal and myenteric neurons in the mouse small intestine
    Candice Fung, Marlene M. Hao, Yuuki Obata, Jan F. Tack, Vassilis Pachnis, Werend Boesmans, Pieter Vanden Berghe · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  34. Cell types and clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics
    Michael Ratz, Leonie von Berlin, Ludvig Larsson, Marcel Martin, Jakub Orzechowski Westholm, Gioele La Manno, Joakim Lundeberg, Jonas Frisén · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  35. Pubertal sex hormones control transcriptional trajectories in the medial preoptic area
    Koichi Hashikawa, Yoshiko Hashikawa, Yuejia Liu, Mark A. Rossi, Marcus L. Basiri, Jane Chen, Omar R. Ahmad, Rishi V. Mukundan, Nathan L. Johnston, Jenna A. McHenry et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  36. Semi-supervised single-cell cross-modality translation using Polarbear
    Ran Zhang, Laetitia Meng-Papaxanthos, Jean‐Philippe Vert · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  37. Single-cell analyses of axolotl forebrain organization, neurogenesis, and regeneration
    Katharina Lust, Ashley Maynard, Tomás Gomes, Jonas Simon Fleck, J. Gray Camp, Elly Margaret Tanaka, Barbara Treutlein · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  38. Ngn2 induces diverse neuronal lineages from human pluripotency
    Hsiu‐Chuan Lin, Zhisong He, Sebastian Ebert, Maria Schörnig, Małgorzata Santel, Anne Weigert, Wulf Hevers, Nael Nadif Kasri, Elena Taverna, J. Gray Camp et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  39. Deletion of Neuroligins from Astrocytes Does Not Detectably Alter Synapse Numbers or Astrocyte Cytoarchitecture by Maturity
    Samantha Rose Golf, Justin H. Trotter, Jinzhao Wang, George Nakahara, Xiao Han, Marius Wernig, Thomas Christian Südhof · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  40. Single-cell analysis of the nervous system at small and large scales with instant partitions
    Paul W. Frazel, K Fricano-Kugler, AA May-Zhang, Michael R. O’Dea, P Prakash, NM Desmet, H Lee, RH Meltzer, Kristina M. Fontanez, Pabodha Hettige et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  41. Inhibition of FAM19A5 restores synaptic loss and improves cognitive function in mouse models of Alzheimer’s disease
    Hanbyul Kim, Sangjin Yoo, Hoyun Kwak, Shi‐Xun Ma, Ryunhee Kim, Minhyeok Lee, Nui Ha, Soonil Pyo, Soon-Gu Kwon, Eun-Ho Cho et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  42. Astrocyte Regional Specialization is Shaped by Postnatal Development
    Margaret E. Schroeder, Dana M. McCormack, Lukas R. Metzner, Jinyoung Kang, Katelyn X. Li, Eunah Yu, Lisa Melamed, Kirsten M. Levandowski, Heather Zaniewski, Qiangge Zhang et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  43. Single-cell chromatin accessibility landscape profiling reveals the diversity of epigenetic regulation in the rat nervous system
    Peiyao Ma, Shanshan Duan, Wen Ma, Qiuting Deng, Yeya Yu, Peng Gao, Yue Yuan, Chuanyu Liu · 2025 · Scientific Data
  44. Oxytocin Modulation of Spinal Circuits Drives Therapeutic Benefits of Massage
    Manon Bohic, Paula Salamone, Wanhong Zuo, Ahmed Negm, Sasha L. Fulton, Shibin Du, Swathi Jayakumar, Jessica Keating, Vanessa Soubeyre, Mark A. Gradwell et al. · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
  45. Late development of OCD-like phenotypes in Dlgap1 knockout mice
    Kimino Minagawa, Takashi Hayakawa, Hayato Akimoto, Takuya Nagashima, Yasuo Takahashi, Satoshi Asai · 2024 · Psychopharmacology
  46. An AAV capsid proposed as microglia-targeting directs genetic expression in forebrain excitatory neurons
    Wenhao Cao, Zhiqun Tan, Bereket T Berackey, Jason K. Nguyen, Sara R. Brown, Shiyang Du, Bin Lin, Qiao Ye, Magdalene J. Seiler, Todd C. Holmes et al. · 2025 · Cell Reports Methods
  47. IL-6–Mediated Neurogenic Inflammation Regulated by the Dorsal Root Ganglion Macrophages Exacerbates Imiquimod-Induced Psoriasis-Like Skin Lesions in Mice
    Jian Jiang, Xin Liu, Yinlian Zhang, Yi Kong, Qingtian Luo, Yunqing Hou, Li Li, Suwen Liu, Qingxiao Tao, Shiying Lin et al. · 2025 · Journal of Investigative Dermatology
  48. Not Just Neurons: Pain Is Orchestrated in Partnership with Many Non-neuronal Cells
    Ewan St. John Smith, Michael D. Burton, Anne‐Marie Heegaard, Cheryl L. Stucky · 2025 · Journal of Neuroscience
  49. The neuro-immune insights of itch: peripheral mechanisms and central glial contributions
    Zhe Li, Ning Yu, Sidi Feng, Xinrui Wang, Yu-Xia Chu, X Liu · 2026 · Cellular & Molecular Biology Letters
  50. VIPR1 acts as an enteric neural checkpoint that suppresses intestinal stem cell-driven epithelial regeneration and exacerbates colitis
    Chaoliang Li, Haohao Wang, Panrui Zhang, Jianbo Yang, Chao Ye, Xiaowei Wei, Yuchen Zhou, Zhentao Yang, Dan Cao, Kaiguang Zhang et al. · 2026 · Cell stem cell
  51. Single-nucleus epigenomic profiling of the adult human central nervous system unveils epigenetic memory of developmental programs
    Mukund Kabbe, Eneritz Agirre, Karl E. Carlström, Özge Dumral, Yuk Kit Lor, Fabio Baldivia Pohl, Nicolas Ruffin, David van Bruggen, Mandy Meijer, Luise A. Seeker et al. · 2026 · Nature Neuroscience
  52. The extracellular matrix as a dynamic regulator of brain function and plasticity
    Chuang Ge, Maral Tajerian · 2026 · Neurobiology of Disease
  53. uPAR is highly expressed in recurrent glioblastoma and represents a candidate CAR T cell target
    William T. Maich, Muhammad Vaseem Shaikh, Anish Puri, Martín A. Rossotti, Shan Grewal, Aapti Khanna, Alisha Anand, Nicholas Mikolajewicz, Mathieu Seyfrid, Dillon McKenna et al. · 2026 · Science Translational Medicine
  54. Developmental xenocortication using human-derived organoids in mice
    Konstantin Kaganovsky, Kevin W. Kelley, T. Gschwind, P. Harary, J. Kochalka, A. White, G. Lerma-Usabiaga, Xiao-Yu Chen, Omer Revah, Felicity Gore et al. · 2026 · Nature
  55. A machine learning based approach for quantitative evaluation of cell migration in Transwell assays based on deformation characteristics
    Fei Zhang, Rongbiao Zhang, Mingji Wei, Guoxiao Li · 2023 · The Analyst
  56. Pathogen recognition by sensory neurons: hypotheses on the specificity of sensory neuron signaling
    Antoine Millet, Nicholas Gregory Jendzjowsky · 2023 · Frontiers in Immunology
  57. Molecular consequences of peripheral Influenza A infection on cell populations in the murine hypothalamus
    René Lemcke, Christine Egebjerg, Nicolai T. Berendtsen, Kristoffer Lihme Egerod, Allan Randrup Thomsen, Tune H. Pers, Jan Pravsgaard Christensen, Birgitte Rahbek Kornum · 2023 · eLife
  58. Where Top-Down Meets Bottom-Up: Cell-Type Specific Connectivity Map of the Whisker System
    Nicolas Rault, Tido Bergmans, Natasja Delfstra, Bisley J. Kleijnen, Fleur Zeldenrust, Tansu Celikel · 2024 · Neuroinformatics
  59. Reactive astrocytes in prion diseases: Friend or foe?
    Natallia Makarava, Rajesh Kushwaha, Ilia V. Baskakov · 2024 · PLoS Pathogens
  60. Is FAM19A5 an adipokine? Peripheral FAM19A5 in wild-type, FAM19A5 knockout, and LacZ knockin mice
    Hoyun Kwak, Eun-Ho Cho, Eun Bee Cho et al. · 2024 · Molecules and Cells
  61. Astrocytes phenomics as new druggable targets in healthy aging and Alzheimer’s disease progression
    Daniele Lana, Filippo Ugolini, Ludovica Iovino, Selene Attorre, Maria Grazia Giovannini · 2025 · Frontiers in Cellular Neuroscience
  62. Neurogenic inflammation and itch in barrier tissues
    Rebecca H. Liu, Dean R Buttaci, Caroline L. Sokol · 2025 · Seminars in Immunology
  63. Flexible analysis of spatial transcriptomics data (FAST): a deconvolution approach
    Meng Zhang, Yiwen Liu, Joel Parker, Lingling An, Xiaoxiao Sun · 2025 · BMC Bioinformatics
  64. Association and shared biological bases between birth weight and cortical structure
    Lu Zhang, Qiao-Yue Ge, Ze-Yuan Sun, Rui Zhang, Xinxi Li, Xiaoli Luo, Run Tian, Yu-Heng Cao, Chun-Yan Pu, Lin Li et al. · 2025 · Translational Psychiatry
  65. Single-cell transcriptome analyses of PBMCs reveal the immunological characteristics of individuals with phlegm-dampness constitution
    Weibo Zhao, Liqiang Zhou, Yixing Wang · 2025 · Frontiers of Medicine
  66. Adult enteric Dclk1-positive glial and neuronal cells reveal distinct responses to acute intestinal injury
    Moritz A. Middelhoff, Giovanni Valenti, Lorenzo Tomassoni, Yosuke Ochiai, Bryana R. Belin, Ryota Takahashi, Ermanno Malagola, Henrik Nienhüser, Michael O. Finlayson, Yoku Hayakawa et al. · 2022 · American Journal of Physiology-Gastrointestinal and Liver Physiology
  67. Applications of single‐cell multi‐omics sequencing in deep understanding of brain diseases
    Xu Zhang, Ping Lü, Xiaorong Shen · 2022 · Clinical and Translational Discovery
  68. SPROUT: spectral sparsification helps restore the spatial structure at single-cell resolution
    Jingwan Wang, Shiying Li, Lingxi Chen, Shuai Cheng Li · 2022 · NAR Genomics and Bioinformatics
  69. Modulatory Action of Voltage-gated Ion Channels in Inflammation and Inflammatory Pain
    Senthilkumar Rajagopal · 2023 · The Open Neurology Journal
  70. Accurate classification of major brain cell types using in vivo imaging and neural network processing
    Amrita Gupta, Jennifer John, Jennifer John, Carlo A. Beretta, Thomas Kuner, Johannes Knabbe · 2023 · PLoS Biology
  71. Catalytic isoforms of AMP-activated protein kinase differentially regulate IMPDH activity and photoreceptor neuron function
    Tae Jun Lee, Yo Sasaki, Philip A. Ruzycki, Norimitsu Ban, Joseph B. Lin, Hung-Ting Wu, Andrea C. Santeford, Rajendra S. Apte · 2024 · JCI Insight
  72. Adjustment of scRNA-seq data to improve cell-type decomposition of spatial transcriptomics
    Lanying Wang, Yuxuan Hu, Lin Gao · 2024 · Briefings in Bioinformatics
  73. The Role of Glial Cells in Neurobiology and Prion Neuropathology
    Arielle J. D. Hay, Katriana A. Popichak, Julie A. Moreno, Mark D. Zabel · 2024 · Cells
  74. Purinergic P2Y1 and P2Y12 receptors control enteric nervous system activity through neuro-glia-macrophage crosstalk
    Blake J. Hendler, Jonathon Lee McClain, Aurora Zilli · 2024 · Purinergic Signalling
  75. RNA-seq data in pain research–an illustrated guide
    Megan Crow, Franziska Denk · 2019 · Pain
  76. Magnetic resonance imaging reveals specific anatomical changes in the brain of Agat‐ and Gamt‐mice attributed to creatine depletion and guanidinoacetate alteration
    Ankit Sinha, Sohail Ahmed, Chris George · 2020 · Journal of Inherited Metabolic Disease
  77. ZMIZ1-associated neurodevelopmental disorder and Hirschsprung disease
    Anders Valind, Pernilla Stenström, Sofie Samuelsson · 2021 · Journal of Pediatric Surgery Case Reports
  78. Non‐zero‐sum microbiome immune system interactions
    Timur Tuganbaev, Kenya Honda · 2021 · European Journal of Immunology
  79. The Climatic Temporal Feature Space: Continuous and Discrete
    Christopher Small, Daniel J. Sousa · 2021 · Advances in Artificial Intelligence and Machine Learning
  80. Collagen VI Regulates Motor Circuit Plasticity and Motor Performance by Cannabinoid Modulation
    Daniel D. Lam, Rhîannan H. Williams, Ernesto Lujan, Koji Tanabe, Georg Huber, Nay Lui Saw, Juliane Merl‐Pham, Aaro V. Salminen, David Lohse, Sally Spendiff et al. · 2021 · Journal of Neuroscience
  81. scMAPA: Identification of cell-type–specific alternative polyadenylation in complex tissues
    Yulong Bai, Yidi Qin, Zhenjiang Fan, Robert M. Morrison, Kyong Nyon Nam, Hassane M. Zarour, Radosveta P. Koldamova, Quasar Saleem Padiath, Soyeon Kim, Hyun Jung Park · 2022 · GigaScience
  82. Pain genetics
    William R. Renthal · 2020 · Elsevier eBooks
  83. In vitro models for investigating itch
    Hendrik Mießner, Judith Anna Seidel, Ewan St. John Smith · 2022 · Frontiers in Molecular Neuroscience
  84. Mini-Review: Enteric glia of the tumor microenvironment: An affair of corruption
    Chloe L. Mariant, Gregory Bacola, Laurianne Van Landeghem · 2023 · Neuroscience Letters
  85. Single-cell sequencing analysis within biologically relevant dimensions
    Robert Kousnetsov, Jessica Bourque, Alexey Surnov, Ian Fallahee, Daniel Hawiger · 2024 · Cell Systems
  86. Sequencing the Human Brain at Single-Cell Resolution
    Malosree Maitra, Corina Nagy, Gustavo Turecki · 2019 · Current Behavioral Neuroscience Reports
  87. Sequencing Diversity One Cell at a Time
    Michael C. Oldham, Anatol C. Kreitzer · 2018 · Cell
  88. Translatome Analyses Using Conditional Ribosomal Tagging in GABAergic Interneurons and Other Sparse Cell Types
    Vivek Mahadevan, Areg Peltekian, Chris J. McBain · 2020 · Current Protocols in Neuroscience
  89. Single-Cell Transcriptomics Unveils Gene Regulatory Network Plasticity
    Giovanni Lo Iacono, Ramon Massoni-Badosa, Holger Heyn · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  90. Coordinating Receptor Expression and Wiring Specificity in Olfactory Receptor Neurons
    Hongjie Li, Tongchao Li, Felix Horns, Jun Li, Qijing Xie, Chuanyun Xu, Bing Wu, Justus M. Kebschull, David Vacek, Anthony Xie et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  91. Lineage-specific control of convergent differentiation by a Forkhead repressor
    Karolina Mizeracka, Julia M. Rogers, Jonathan D. Rumley, Shai Shaham, Martha L. Bulyk, John I. Murray, Maxwell G. Heiman · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  92. Genes influenced by MEF2C contribute to neurodevelopmental disease via gene expression changes that affect multiple types of cortical excitatory neurons
    Donna Cosgrove, Laura Whitton, Laura Fahey, Pilib Ó Broin, Gary J Donohoe, Derek W. Morris · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  93. Multitask learning for Transformers with application to large-scale single-cell transcriptomes
    Minxing Pang, Jesper N. Tegner · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  94. Experience-independent transformation of single-cell 3D genome structure and transcriptome during postnatal development of the mammalian brain
    Longzhi Tan, Wenping Ma, Honggui Wu, Yinghui Zheng, Dong Xing, Ritchie Chen, Xiang Li, Nicholas Daley, Karl A. Deisseroth, X. Sunney Xie · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  95. The mechanism of analgesia in Na V 1.7 null mutants
    Donald Iain MacDonald, Shafaq Sikandar, Jan Weiss, Martina M. Pyrski, Ana Paula Luiz, Queensta Millet, Edward C. Emery, Flavia Mancini, Gian Domenico Iannetti, Sascha R.A. Alles et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  96. Age-associated changes in lineage composition of the enteric nervous system regulate gut health and disease
    Subhash Kulkarni, Monalee Saha, Jared Slosberg, Alpana Singh, Sushma Nagaraj, Laren S. Becker, Chengxiu Zhang, Alicia Bukowski, Zhuolun Wang, Guosheng Liu et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  97. Coexpression enables multi-study cellular trajectories of development and disease
    Brian Hie, Hyunghoon Cho, Bryan D. Bryson, Bonnie Berger · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  98. scMomentum: Inference of Cell-Type-Specific Regulatory Networks and Energy Landscapes
    Larisa M. Soto, Juan P. Bernal-Tamayo, Robert Lehmann, Subash Balsamy, Xabier Martinez‐de‐Morentin, Amaia Vilas‐Zornoza, Patxi San-Martin, Felipe Prósper, David Gómez-Cabrero, Narsis A. Kiani et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  99. Transcriptional and Anatomical Diversity of Medium Spiny Neurons in the Primate Striatum
    Jing He, Michael Kleyman, Jianjiao Chen, Aydin Alikaya, Kathryn M. Rothenhoefer, Bilge Esin Öztürk, Morgan E. Wirthlin, Andreea C. Bostan, Kenneth N. Fish, Leah C. Byrne et al. · 2021 · SSRN Electronic Journal
  100. Perivascular SPP1 Mediates Microglial Engulfment of Synapses in Alzheimer’s Disease Models
    Sebastiaan De Schepper, Judy Z. Ge, Gerard Crowley, Laís S. S. Ferreira, Dylan T. Garceau, Christina E. Toomey, Dimitra Sokolova, Thomas Childs, Tammaryn Lashley, Jemima J. Burden et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)