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Oral Druggable Space beyond the Rule of 5: Insights from Drugs and Clinical Candidates
Open accessAbstract
The rule of 5 (Ro5) is a set of in silico guidelines applied to drug discovery to prioritize compounds with an increased likelihood of high oral absorption. It has been influential in reducing attrition due to poor pharmacokinetics over the last 15 years. However, strict reliance on the Ro5 may have resulted in lost opportunities, particularly for difficult targets. To identify opportunities for oral drug discovery beyond the Ro5 (bRo5), we have comprehensively analyzed drugs and clinical candidates with molecular weight (MW) > 500 Da. We conclude that oral drugs are found far bRo5 and properties such as intramolecular hydrogen bonding, macrocyclization, dosage, and formulations can be used to improve bRo5 bioavailability. Natural products and structure-based design, often from peptidic leads, are key sources for oral bRo5 drugs. These insights should help guide the design of oral drugs in bRo5 space, which is of particular interest for difficult targets.
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“In the development of new drugs, 500 Da is often quoted as the maximum molecular weight parameter. However, it has been observed that molecules with higher molecular weights are also capable of being absorbed, and the limits of oral bioavailability appear to extend to about MW ≤ 1000 Da [70,71,72].”
From The EU’s Per- and Polyfluoroalkyl Substances (PFAS) Ban: A Case of Policy over Science (2023) · cites this paper as [71]
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“In general, PROTAC physicochemical property space falls beyond the ‘rule of 5’ (refs59,60) owing to the bifunctional nature of the molecules.”
From PROTAC targeted protein degraders: the past is prologue (2022) · cites this paper as [60]
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“[73], new rules such as bRo5 (beyond the rule of 5) allow the identification of promising drugs that do not fit to the traditional one, for example, the HCV and HIV protease inhibitors, Simeprevir and Atazanavir, respectively.”
New nitrosyl ruthenium complexes with combined activities for multiple cardiovascular disorders
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“Additionally, although MW plays an important role in determining the permeability of drugs across the intestinal membrane [55], a small number of approved oral drugs are beyond the chemical space defined by Ro5 (bRoF) and possess a high MW, such as isavuconazonium, an oral prodrug of isavuconazole [50,56,57].”
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“Macrocycles possess a distinct large ring architecture situated in the beyond the rule of 5 (bRo5) chemical space [41 – 45], as such capable of modulating dif fi cult therapeutic targets [46 – 48] and indeed having emerged as a privileged class of targeted antineoplastic drugs [49, 50].”
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Self-citationElucidating the Potential Inhibitor against Type 2 Diabetes Mellitus Associated Gene of GLUT4
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“Both co-crystallized ligands bound to the same site on their respective proteins with minimal conformational differences, achieving RMSD values that were lower than the widely The results indicated that all synthesized ligands displayed favorable binding energy values and effectively interacted…”
Background
Metadata
- Authors
- Doak, B. C., Over, B., Giordanetto, F., & Kihlberg, J.
- Affiliations
- Uppsala University (SE)
- Corresponding author
- Kihlberg, Jan
- Venue
- Chemistry & Biology
- Publisher
- Elsevier BV
- Published
- 2014-09
- Volume
- 21
- Issue
- 9
- Pages
- 1115-1142
- ISSN
- 1074-5521 (ISSN-L)
- OpenAlex
- W2106605095
- Cited by
- 835
- References
- 295
- Citations by year
- 2026: 101 · 2025: 82 · 2024: 103 · 2023: 111 · 2022: 103 · 2021: 88 · 2020: 65 · 2019: 50 · 2018: 51 · 2017: 27 · 2016: 37 · 2015: 14
- FWCI
- 2.15
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Chemistry & Biology (publishedVersion, public-domain)
- PubMed (publishedVersion)
- Funders
- AstraZeneca
- Uppsala Universitet
- Topics
- Life Sciences › Pharmacology, Toxicology and Pharmaceutics › Drug Discovery › Computational Drug Discovery Methods
- Life Sciences › Pharmacology, Toxicology and Pharmaceutics › Pharmaceutical Science › Drug Solubulity and Delivery Systems
- Physical Sciences › Chemistry › Organic Chemistry › Chemical Synthesis and Analysis
- Keywords
- Rule of 5, oral bioavailability, drug discovery, molecular weight, intramolecular hydrogen bonding, macrocyclization, oral dosage forms, natural products, structure-based drug design, pharmacokinetics, clinical candidates
- MeSH terms
- Administration, Oral, Biological Products, Pharmaceutical Preparations, Humans, Molecular Weight, Protease Inhibitors, Databases, Factual, Drug Delivery Systems, Macrocyclic Compounds, Drug Discovery
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