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Oral Druggable Space beyond the Rule of 5: Insights from Drugs and Clinical Candidates
Open accessAbstract
The rule of 5 (Ro5) is a set of in silico guidelines applied to drug discovery to prioritize compounds with an increased likelihood of high oral absorption. It has been influential in reducing attrition due to poor pharmacokinetics over the last 15 years. However, strict reliance on the Ro5 may have resulted in lost opportunities, particularly for difficult targets. To identify opportunities for oral drug discovery beyond the Ro5 (bRo5), we have comprehensively analyzed drugs and clinical candidates with molecular weight (MW) > 500 Da. We conclude that oral drugs are found far bRo5 and properties such as intramolecular hydrogen bonding, macrocyclization, dosage, and formulations can be used to improve bRo5 bioavailability. Natural products and structure-based design, often from peptidic leads, are key sources for oral bRo5 drugs. These insights should help guide the design of oral drugs in bRo5 space, which is of particular interest for difficult targets.
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“In the development of new drugs, 500 Da is often quoted as the maximum molecular weight parameter. However, it has been observed that molecules with higher molecular weights are also capable of being absorbed, and the limits of oral bioavailability appear to extend to about MW ≤ 1000 Da [70,71,72].”
From The EU’s Per- and Polyfluoroalkyl Substances (PFAS) Ban: A Case of Policy over Science (2023) · cites this paper as [71]
In the citing paper
“In general, PROTAC physicochemical property space falls beyond the ‘rule of 5’ (refs59,60) owing to the bifunctional nature of the molecules.”
From PROTAC targeted protein degraders: the past is prologue (2022) · cites this paper as [60]
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Cites
Lipinski, C. A., Lombardo, F., Dominy, B. W., & Feeney, P. J. (2001) · Advanced Drug Delivery Reviews · doi:10.1016/s0169-409x(00)00129-0 · Cited by 18,139
Lipinski, C. A., Lombardo, F., Dominy, B. W., & Feeney, P. J. (1997) · Advanced Drug Delivery Reviews · doi:10.1016/s0169-409x(96)00423-1 · Cited by 11,484
Molecular properties that influence the oral bioavailability of drug candidates
Veber, D. F., Johnson, S. R., Cheng, H.-Y., Smith, B. R., Ward, K. W., & Kopple, K. D. (2002) · Journal of Medicinal Chemistry · doi:10.1021/jm020017n · Cited by 8,420
Lead- and drug-like compounds: the rule-of-five revolution
Lipinski, C. A. (2004) · Drug Discovery Today Technologies · doi:10.1016/j.ddtec.2004.11.007 · Cited by 6,455
Escape from Flatland: Increasing Saturation as an Approach to Improving Clinical Success
Lovering, F., Bikker, J. A., & Humblet, C. C. (2009) · Journal of Medicinal Chemistry · doi:10.1021/jm901241e · Cited by 4,614
Can the pharmaceutical industry reduce attrition rates?
Kola, I., & Landis, J. (2004) · Nature Reviews Drug Discovery · doi:10.1038/nrd1470 · Cited by 4,167
Drug-like properties and the causes of poor solubility and poor permeability
Lipinski, C. A. (2000) · Journal of Pharmacological and Toxicological Methods · doi:10.1016/s1056-8719(00)00107-6 · Cited by 3,776
How to improve R&D productivity: the pharmaceutical industry's grand challenge
Paul, S. M., Mytelka, D. S., Dunwiddie, C. T., Persinger, C. C., Munos, B. H., Lindborg, S. R., & Schacht, A. L. (2010) · Nature Reviews Drug Discovery · doi:10.1038/nrd3078 · Cited by 3,566
Membrane transporters in drug development
The International Transporter Consortium, Giacomini, K. M., Huang, S.-M., Tweedie, D. J., Benet, L. Z., Brouwer, K. L. R., Chu, X., Dahlin, A., Evers, R., Fischer, V., et al. (2010) · Nature Reviews Drug Discovery · doi:10.1038/nrd3028 · Cited by 3,340
Ertl, P., Rohde, B., & Selzer, P. M. (2000) · Journal of Medicinal Chemistry · doi:10.1021/jm000942e · Cited by 3,149
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Items 601–700 of 869
Protein degradation induced by PROTAC molecules as an emerging drug discovery strategy
Koravović, M., Marković, B. D., Kovačević, M., Rmandić, M., & Tasić, G. (2022) · Journal of the Serbian Chemical Society · doi:10.2298/jsc211209027k · Cited by 2
Dolanbay, S. N., Yılmaz, Z. K., Kaya, B., Aslım, B., & Ülküseven, B. (2023) · New Journal of Chemistry · doi:10.1039/d3nj00016h · Cited by 2
Ercan, S., & Pir, M. (2023) · ChemistrySelect · doi:10.1002/slct.202303543 · Cited by 2
In silico design of new ketorolac bioisosteres as anti-inflammatory agents
Gamarra-Sánchez, C. D., Rodríguez-Silva, C. N., Cordova-Muñoz, A. M., Asmad-Cruz, L., Silva-Correa, C. R., & Torre, V. E. V.-L. (2024) · Journal of Applied Pharmaceutical Science · doi:10.7324/japs.2024.162337 · Cited by 2
“The employ in silico has allowed the reduction of large numbers of experimental animals in the next study phase, rationalizing their use.”
Naderi, P. M., Zargoosh, K., Qandalee, M., Firuzi, O., Behmadi, H., Hosseinkhani, S., Ghafary, S. M., Duran-Valle, C. J., & López‐Coca, I. M. (2024) · ChemPlusChem · doi:10.1002/cplu.202400095 · Cited by 2
Feio, J. A. S., de Oliveira, E. C. L., Sales, C., da Costa, K. S., & Lima, A. H. (2024) · PLoS ONE · doi:10.1371/journal.pone.0305253 · Cited by 2
Presser, A., Blaser, G., Pferschy‐Wenzig, E., Kaiser, M., Mäser, P., & Schuehly, W. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms26052114 · Cited by 2
Braz, N. F., Slater, M. J., & Lang, S. (2025) · ACS Medicinal Chemistry Letters · doi:10.1021/acsmedchemlett.5c00105 · Cited by 2
Upadhyaya, S. R., Bashyal, J., Raut, B. K., & Parajuli, N. (2025) · Discover Chemistry. · doi:10.1007/s44371-025-00266-0 · Cited by 3
“…rule of five criteria [78]—molecular weight ≤ 500 Da, log P ≤ 5, hydrogen bond donors ≤ 5, and hydrogen bond acceptors ≤ 10—and Veber’s rule [79]—TPSA > 140 Ų and rotatable bonds ≤ 10—the hit compounds exhibited better drug-like properties compared to the reference compound, orlistat.…”
Conformational Trajectory of the Molecular Chameleon Grazoprevir From Formulation to Target‐Bound
Wieske, L. H. E., Bu, G., Erdélyi, M., Kihlberg, J. O., Gonen, T., & Danelius, E. (2025) · Chemistry - A European Journal · doi:10.1002/chem.202502256 · Cited by 2
“Despite falling outside these conventional guidelines, many bRo5 drugs are orally active, suggesting they possess intrinsic conformational flexibility, or “molecular chameleonicity”, that enables them to modulate their polarity in response to different environments [ 3 ].”
Self-citationSTUDI IN SILICO SENYAWA TANAMAN Nerium oleander TERHADAP STAT-3 PADA KANKER PAYUDARA
Komarudin, A. D. P., Purnama, M. F. G., Purnama, M. F. G., Sari, A. Y., Sahila, E. N. M. R., & Izzati, A. (2021) · Jurnal Farmasi Udayana · doi:10.24843/jfu.2021.v10.i02.p07 · Cited by 2
“Obat yang memiliki berat molekul lebih dari 500 g/mol akan memiliki permeabilitas yang kurang baik (Doak et al., 2014).”
BackgroundInfluentialNMR Spectroscopy for Studying Peptide Conformations and Cell Permeability
Adaligil, E., & Fairbrother, W. J. (2022) · ACS symposium series · doi:10.1021/bk-2022-1417.ch006 · Cited by 2
Villoutreix, B. O. (2016) · Annales Pharmaceutiques Françaises · doi:10.1016/j.pharma.2016.03.006 · Cited by 2
Kamal, A. A. M., Habib, M. M. W., Haupenthal, J., Hartmann, R. W., & Empting, M. (2019) · Biological Chemistry · doi:10.1515/hsz-2018-0333 · Cited by 2
Meanwell, N. A., Rajamani, R., Scola, P. M., & Sun, L. (2019) · Topics in medicinal chemistry · doi:10.1007/7355_2018_58 · Cited by 2
Yuliani, Y., Riyadi, P. H., Dewi, E. N., Jaswir, I., & Agustini, T. W. (2021) · F1000Research · doi:10.12688/f1000research.52394.1 · Cited by 2
Current Status and Perspectives of Oral Therapeutic Protein and Peptide Formulations: A Review
Manu, G., Firdose, N., Jayanthi, M. K., Raj, R., Patil, S. M., Chandra, S. J., Shirahatti, P. S., & Ramu, R. (2021) · Journal of Pharmaceutical Research International · doi:10.9734/jpri/2021/v33i43a32472 · Cited by 2
“Other parameters such as dose concentration also play an important role for optimal absorption [123].”
BackgroundAgustini, D., Vernadesly, L., DELVIANA, & Theodorus, T. (2021) · Asian Journal of Pharmaceutical and Clinical Research · doi:10.22159/ajpcr.2021.v14i10.43025 · Cited by 2
“to these rules, drug-like compounds should have a molecular weight (MW) <500 g/mol, a log p <5 (to describe hydrophobicity), several hydrogen bond donors (HBDs) no more than 5, and several hydrogen bond acceptors (HBAs) no more than 10 [13], with the number of violations allowed no more than 1 [14].”
BackgroundRoles of Conformations on Predictions of Peptide Properties
Sindhikara, D., & Johnston, J. M. (2022) · ACS symposium series · doi:10.1021/bk-2022-1417.ch004 · Cited by 2
mRNA Display and Its Growing Potential in the Discovery ofDe NovoTherapeutic Peptide Candidates
Helmling, C., & Cunningham, C. N. (2022) · ACS symposium series · doi:10.1021/bk-2022-1417.ch002 · Cited by 2
Wahyudi, S. T., Wahyuni, W. T., Asoka, S. F., & Batubara, I. (2022) · AIP conference proceedings · doi:10.1063/5.0103689 · Cited by 2
Yuliani, Y., Riyadi, P. H., Dewi, E. N., Jaswir, I., & Agustini, T. (2021) · F1000Research · doi:10.12688/f1000research.52394.2 · Cited by 8
“The Lipinski rule of five is generally employed in accessing the drug-likeness of active compounds to prioritize compounds with an increased likelihood of high oral absorption 38 .”
Anandakumar, S., Kannan, D., Wilson, E. G., Narayanan, K. B., Ganesan, S., Kadarkarai, K., & Tamizh, M. M. (2020) · ChemRxiv · doi:10.26434/chemrxiv.12781754.v2 · Cited by 2
Ayuk, E. L., Uchegbu, M. O., Aronimo, S. B., & Ebiem-Kenechukwu, P. I. (2024) · Preprints.org · doi:10.20944/preprints202401.1785.v1 · Cited by 2
Shendre, A., Gahlot, P. S., & Raghava, G. P. S. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.01.19.700485 · Cited by 2
Tripathi, P. K., & Jain, C. K. (2024) · Recent Advances in Food Nutrition & Agriculture · doi:10.2174/012772574x294492240527081926 · Cited by 2
Indulkar, A. S., Slade, R. T., Jana, N., Frey, R. R., Penning, T. D., Lai, A., & Leblanc, A. F. (2024) · Journal of Pharmaceutical Sciences · doi:10.1016/j.xphs.2024.09.012 · Cited by 1
Barros, S. É. D. L., de Lima, H. B., Batista, M. A., Cruz, R. A. S., Barcelos, M. P., Silva, G. M., da Silva, C. H. T. D. P., Taft, C. A., & Hage-Melim, L. I. D. S. (2024) · Engineering materials · doi:10.1007/978-3-031-75984-0_8 · Cited by 1
MLDockKit: A precision drug discovery platform for prostate cancer
Mwakio, E. W., Akala, H. M., Wekesa, C., & OKOTH, P. K. (2025) · Computational and Structural Biotechnology Reports · doi:10.1016/j.csbr.2025.100037 · Cited by 1
Mathes, D., Macedo, L. B., Pieta, T. B., Machado, M. M., Rodrigues, O. E. D., Leal, J. G., da Silva, S. R., Librelotto, G. R., Rolim, C. M. B., & Nogueira-Librelotto, D. R. (2025) · Ciência e Natura · doi:10.5902/2179460x88474 · Cited by 2
“However, this factor does not limit the follow-up research on this compound, considering that several antitumor drugs have even higher molecular weights (Chagas et al., 2018; Doak et al., 2014; Shultz, 2018) .”
Szreder, J., Woźniak, K., Erfurt, K., Grymel, M., & Pastuch-Gawołek, G. (2025) · Cancers · doi:10.3390/cancers17111737 · Cited by 2
“This is particularly true for antibiotics, biological drugs, and natural medical products [66].”
Bibi, R., Zainab, A., Dawood, S., Khan, H. A., Shah, M. A., Nijabat, A., Ahmad, M., Dawoud, T. M. S., Mughram, M. H. A., & Bourhia, M. (2025) · Chemistry & Biodiversity · doi:10.1002/cbdv.202500372 · Cited by 1
“This highlighted a trade-off between binding potency and pharmacokinetic feasibility [47].”
Kanjanasirirat, P., Chabang, N., Wongwitayasombat, C., Tuchinda, P., Munyoo, B., Kangwanrangsan, N., Hongeng, S., Nutho, B., & Charoensutthivarakul, S. (2025) · ADMET & DMPK · doi:10.5599/admet.2901 · Cited by 1
“Additionally, its molecular weight, approximately 540.5 g mol -1 , slightly exceeds the Lipinski rule threshold (500 Da) [76,77], but remains within the acceptable range observed for many bioactive natural products [77,78].”
InfluentialKim, B., Sheridan, R. P., Zhang, R., de Barros, E. P., Johnston, J. M., & Li, X. (2025) · Journal of Chemical Information and Modeling · doi:10.1021/acs.jcim.5c01600 · Cited by 2
Sun, Q., Gallicchio, E., Levy, R. M., & Deng, N. (2026) · The Journal of Physical Chemistry B · doi:10.1021/acs.jpcb.5c06714 · Cited by 1
Mioč, M., Pavić, K., Poje, G., Rajić, Z., & Kralj, M. (2026) · Pharmacological Reports · doi:10.1007/s43440-026-00849-3 · Cited by 1
Ahamed, M. S., & Ashik, S. A. A. (2026) · Molecular Diversity · doi:10.1007/s11030-026-11532-3 · Cited by 1
Çalışır, F., Varma, M. M., Güngör, Ö., & Güngör, S. A. (2026) · Chemistry & Biodiversity · doi:10.1002/cbdv.71202 · Cited by 1
“Lipinski’s Rule of Five highlights key factors influencing oral bioavailability, including molecular weight, lipophilicity (log P), and hydrogen bonding capacity [ 54 ].”
Biotransformation research advances—2025 year in review
Cheruzel, L., Argikar, U. A., Brunetti, P., Chatzopoulou, M., Chen, L., Cho, S., Dhaware, D., Heck, C. J. S., Honrao, C., Khojasteh, S. C., et al. (2026) · Drug Metabolism Reviews · doi:10.1080/03602532.2026.2666155 · Cited by 1
“Overall, this discovery sheds new light on the industry’s shift toward larger, more complex molecules that venture ‘Beyond the Rule of 5’ (Doak et al. 2014).”
Lambev, M., Dimitrova, D., Bekyarov, P., & Mihaylova, S. G. (2026) · Process Safety and Environmental Protection · doi:10.1016/j.cherd.2026.06.034 · Cited by 1
Shrestha, R. L., Parajuli, N., Chhetri, S. P., Tamang, A., Poudel, M., Shiva, M. C., Shrestha, A., Shrestha, T., Bharati, S., Maharjan, B., et al. (2026) · Advanced Theory and Simulations · doi:10.1002/adts.202502222 · Cited by 2
Zhao, T., Chen, D., Chen, Z., Wang, Q., Qing, J., Huang, Q., Zhao, Y., & Zhu, L. (2026) · Molecular Diversity · doi:10.1007/s11030-026-11634-y · Cited by 1
张富荣, Wang, Q., Li, M., Wang, T., Lei, P., Huang, T., & Wu, Z. (2026) · Frontiers in Immunology · doi:10.3389/fimmu.2026.1935909 · Cited by 1
Miller, S. M., Moos, W. H., Munk, B. H., & Munk, S. A. (2016) · Elsevier eBooks · doi:10.1016/b978-0-08-100625-2.00011-8 · Cited by 1
Link, J. O. (2019) · Topics in medicinal chemistry · doi:10.1007/7355_2019_67 · Cited by 1
Dougnon, G., & Ito, M. (2022) · Planta Medica · doi:10.1055/a-1770-7581 · Cited by 1
“Nevertheless, although other interesting rules such as the beyond rule of five (bRo5) exist [61 – 64], sesquiterpenes in this study do not have a MW > 500 Da.”
BackgroundPhysicochemical Space of Synthetic and Natural Pesticides – A Meta-Analysis
Dubey, S., Guignard, F., Gaume, A., Gindro, K., Schnée, S., Joz-Roland, M., Broennimann, O., & Dubey, O. (2022) · PhytoFrontiers™ · doi:10.1094/phytofr-12-21-0083-r · Cited by 1
Computational phytochemistry, databases, and tools
Ejiofor, I. I. (2023) · Elsevier eBooks · doi:10.1016/b978-0-323-90593-0.00015-0 · Cited by 1
Lenin, B., Ramasubramanyan, S., Vetrivel, U., & Chitipothu, S. (2023) · Journal of Biomolecular Structure and Dynamics · doi:10.1080/07391102.2023.2187234 · Cited by 1
“On the other hand, NPs often fall beyond (Lipinski’s) rule of five space (bRO5) and break conventional rules of bioavailability (Doak et al., 2014).”
BackgroundJoel, C., Jebakumar, D. S. I., Bennie, R. B., Ebenezer, C., Solomon, R. V., & Abraham, S. D. (2023) · Iranian Journal of Science · doi:10.1007/s40995-023-01474-y · Cited by 1
“From Table 5, it is observed that all the compounds are found to differ slightly from Lipinski’s criteria, which is acceptable as there are many exceptions to the rule existing as drugs in the market (Walters 2012; Doak et al. 2014).”
BackgroundKamothi, D. J., Gari, M., Sharma, A., & Kumar, D. (2023) · International Journal of Veterinary Sciences and Animal Husbandry · doi:10.22271/veterinary.2023.v8.i3b.529 · Cited by 1
Izzaturrahmi, A. S., Pauziah, A. S. U., Virliana, A., Sitinjak, G. M. L., Ramadhiany, Z. Z., Elaine, A. A., Sitinjak, B. D. P., & Aulifa, D. L. (2023) · Indonesian Journal of Biological Pharmacy · doi:10.24198/ijbp.v3i3.45597 · Cited by 1
Parawansah, P., Pratama, R. R., Nuralifah, N., Arfan, A., Ruslin, R., Widyowati, R., & Sukardiman, S. (2024) · Journal of Pharmacy & Pharmacognosy Research · doi:10.56499/jppres23.1818_12.4.628 · Cited by 1
Le, T. M., Njangiru, I. K., Vincze, A., Zupkó, I., Balogh, G. T., & Szakonyi, Z. (2024) · RSC Advances · doi:10.1039/d4ra03467h · Cited by 1
Li, Y., Cotham, W. E., Eliasof, A., Bland, K., Walla, M. D., Pellechia, P. J., Chen, C., Fan, D., McLaughlin, J. P., & Liu‐Chen, L. (2024) · International Journal of Molecular Sciences · doi:10.3390/ijms252111389 · Cited by 1
“Investigation of its conformational dynamics using variant temperature 1 H NMR experiment suggests that this beyond rule-of-5 (bRo5) [16,17] molecule behaves as a chameleonic peptide which can adjust its conformation in response to solvent change.”
BackgroundHönig, S. M. N., Gutermuth, T., Ehrt, C., Lemmen, C., & Rarey, M. (2024) · Journal of Computer-Aided Molecular Design · doi:10.1007/s10822-024-00581-1 · Cited by 2
Kovari, D., Male, L., Roper, K. A., Mang, C. F., Kunz, O., & Cox, L. R. (2025) · The Journal of Organic Chemistry · doi:10.1021/acs.joc.4c02690 · Cited by 1
Targeting RNA with Small Molecules: Fundamental Principles
Saw, P. E., & Song, E. (2025) · Springer eBooks · doi:10.1007/978-981-96-3041-7_21 · Cited by 1
Udrea, A.-M., Bilea, F., Avram, S., & Staicu, A. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms26146668 · Cited by 1
“This suggests that these compounds are unlikely to be orally active, and alternative methods of administration, like parenteral, should be considered in future studies [55,56].”
Dai, Z., Yang, D., Wang, K., Chen, Z., Tan, J., Tian, Y., Tang, D., Xu, Z., Chen, Z., & Li, Y. (2025) · Molecular Diversity · doi:10.1007/s11030-025-11312-5 · Cited by 1
“However, previous studies have shown that applying a rigid cutoff based on the Lipinski’s Rule of Five for molecular weight may result in the exclusion of some orally bioavailable drugs or potential clinical candidates [40, 41].”
Tanrıverdi, E. A., Tanrıverdi, A. A., & Yıldıko, Ü. (2025) · Sakarya University Journal of Science · doi:10.16984/saufenbilder.1646947 · Cited by 1
Cell Permeability and Target Engagement of Middle-Sized Molecules Quantified by In-Cell NMR
Sukigara, Y., Kamoshida, H., Tokunaga, Y., Fujisaki, M., Imai, M., Kobayashi, Y., Kofuku, Y., Ueda, T., Shimada, I., & Takeuchi, K. (2025) · Analytical Chemistry · doi:10.1021/acs.analchem.5c01494 · Cited by 1
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Taib, N., & Tchouar, N. (2025) · International Journal of Computational and Experimental Science and Engineering · doi:10.22399/ijcesen.3994 · Cited by 1
“Such molecules often feature notable structural and physicochemical adaptations that enable them to bypass the limitations imposed by their larger size [41].”
Choudhury, P., & Kim, D. Y. (2017) · Cited by 1
Small-molecule Targeted Degradation of RNA
Ursu, A., Costales, M. G., Childs‐Disney, J. L., & Disney, M. D. (2020) · Royal Society of Chemistry eBooks · doi:10.1039/9781839160691-00317 · Cited by 1
Najar, A., Omar, R. M. K., Bobtaina, E., Jabber, S., Najwa, M. I., Aeyad, T., Tawati, S. M., & Khalifa, A. M. M. (2022) · Journal of Drug Delivery and Therapeutics · doi:10.22270/jddt.v12i4.5429 · Cited by 1
Synthesis in Medicinal Chemistry
Jordan, A. M., & Young, R. J. (2023) · Royal Society of Chemistry eBooks · doi:10.1039/9781788018982-00040 · Cited by 1
In Silico Approaches to Address Compound Attrition
Gedeck, P., Krämer, C., & Lewis, R. A. (2015) · Wiley eBooks · doi:10.1002/9781118819586.ch10 · Cited by 1
FBDD Applications to Kinase Drug Hunting
Saxty, G. (2016) · Methods and principles in medicinal chemistry · doi:10.1002/9783527683604.ch18 · Cited by 1
Caron, G., & Ermondi, G. (2019) · Future Medicinal Chemistry · doi:10.4155/fmc-2018-0287 · Cited by 1
Rogers, J. M., & Suga, H. (2019) · Wiley eBooks · doi:10.1002/9783527823987.vol2_c15 · Cited by 1
Sokkar, P., Harms, M., Stürzel, C. M., Gilg, A., Kızılsavaş, G., Raasholm, M., Preising, N., Wagner, M., Ständker, L., Weidinger, G., et al. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.10.23.352708 · Cited by 1
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Ruiz-Moreno, A. J. (2021) · University of Groningen research database (University of Groningen / Centre for Information Technology) · doi:10.33612/diss.193912062 · Cited by 1
Anandakumar, S., Kannan, D., Wilson, E., Narayanan, K. B., Ganesan, S., Kadarkarai, K., & Manoharan, M. T. (2020) · ChemRxiv · doi:10.26434/chemrxiv.12781754 · Cited by 1
In Silico ADME: Rule-Based Systems
Talevi, A. (2021) · Springer eBooks · doi:10.1007/978-3-030-51519-5_148-1 · Cited by 1
Permana, S., Hanum, H. A., Azizah, M. R., Ilmiyah, S. Z., Permana, A. Z., Norahmawati, E., Widodo, E., Fakurazi, S., Kawamoto, Y., & Endharti, A. T. (2024) · Tropical Journal of Natural Product Research · doi:10.26538/tjnpr/v8i8.18 · Cited by 1
Polyphenol Inhibition of Human Pancreatic Lipase: An In-Silico Study Towards Obesity ControlPreprint
Upadhyaya, S. R., Bashyal, J., Raut, B. K., & Parajuli, N. (2024) · Research Square · doi:10.21203/rs.3.rs-5360869/v1 · Cited by 1
An amide-to-chloroalkene substitution improves the peptide permeabilityPreprint
Takeo, S., Iio, C., Sakakibara, A., Takeda, M., Yamazaki, Y., Sato, K., Mase, N., Watanabe, M., & Narumi, T. (2024) · ChemRxiv · doi:10.26434/chemrxiv-2024-l36zv · Cited by 1
Baylon, J. L., Chalkley, M. J., Siu, T., Shou, W. Z., Sun, Y., Cai, X., Paiva, A., Patel, S. A., Zvyaga, T. A., & Weiss, D. R. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.03.19.644178 · Cited by 1
Split inteins for generating combinatorial non-ribosomal peptide librariesPreprint
Gonschorek, P., Wilson, C. S., Schelhas, C., Bozhüyük, K. A. J., Grün, P., & Bode, H. B. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.10.02.680031 · Cited by 1
Gamage, S. D., Simbartl, L. A., Kralovic, S. M., Wallace, K. S., & Roselle, G. A. (2013) · Online Journal of Public Health Informatics · doi:10.5210/ojphi.v5i1.4596
dos Santos, R. N. (2016) · Digital Library of Theses and Dissertations (Universidade de São Paulo) · doi:10.11606/t.76.2016.tde-02022016-163931
Soumana, D. I. (2015) · The Journal of the American Medical Association (JAMA) Network (American Medical Association) · doi:10.13028/m2s01n
“In addition to contributing directly to inhibitor–protease hydrophobic interactions, as is the case for the P2 − P4 macrocycle in MK-5172, the hydrophobic character of the macrocycle can increase lipophilicity, and improve pharmacokinetic properties such as cellular permeability and stability [104, 109, 110].”
BackgroundContemporary Considerations for Discovering a Successful Medicine
Hann, M. M., Bayliss, M. K., & Leach, A. R. (2016) · Elsevier eBooks · doi:10.1016/b978-0-12-409547-2.12310-8
The development of preclinical strategies for facilitation of lead candidate selection
Kulczar, C. D. (2016) · Purdue e-Pubs (Purdue University System)
Tailoring Hit Identification and Qualification Methods for Targeting Protein–Protein Interactions
Walse, B., Turnbull, A. P., & Boyd, S. M. (2017) · Wiley eBooks · doi:10.1002/9781119099512.ch3
Berg, T. (2017) · Angewandte Chemie · doi:10.1002/ange.201706479
Macrocycles for Protein–Protein Interactions
Leitch, E. K., & Tavassoli, A. (2017) · doi:10.1002/9781119092599.ch8
Estudos de síntese total de peptídeos cíclicos naturais
dos Santos, G. B. (2018) · doi:10.11606/t.60.2018.tde-11042017-155304
Transitioning novel peptide hits into lead compounds
Trim, S. A., & Trim, C. M. (2019)
Hudson, I. L., Leemaqz, S., & Abell, A. D. (2020) · Royal Society of Chemistry eBooks · doi:10.1039/9781839160233-00251
Synthesis of Novel Macrocyclic Compounds Derived from Ceftriaxone
Sano, M., Shimaoka, H., Kohira, N., Murakami, Y., Murai, H., & Yoshizawa, H. (2020) · Chemistry Letters · doi:10.1246/cl.200607
Meek, T. D. (2021) · Wiley eBooks · doi:10.1002/0471266949.bmc260
Oselusi, S. O. (2020) · University of the Western Cape Electronic Theses and Dissertations Repository (University of the Western Cape)
Virtual Screening for Chemists
Saha, I., & Harran, P. G. (2021) · ACS in focus · doi:10.1021/acsinfocus.7e5001
Atangcho, L. (2020) · Deep Blue (University of Michigan)
INVESTIGATION OF THE BIOSYNTHESIS OF THE NUCLEOSIDE ANTIBIOTIC SPHAERIMICIN
Overbay, J. (2021) · UKnowledge (University of Kentucky) · doi:10.13023/etd.2021.151
Diversity-orientated synthesis of macrocyclic heterocycles using a double S N Ar approach
Raubo, P., Carbajo, R. J., McCoull, W., Raubo, J., & Thomas, M. C. (2021) · Organic & Biomolecular Chemistry · doi:10.1039/d1ob00612f
Yamamoto, K. Z., Yasuo, N., & Sekijima, M. (2021) · doi:10.33774/chemrxiv-2021-41r69-v2
Metadata
- Authors
- Doak, B. C., Over, B., Giordanetto, F., & Kihlberg, J.
- Affiliations
- Uppsala University (SE)
- Corresponding author
- Kihlberg, Jan
- Venue
- Chemistry & Biology
- Publisher
- Elsevier BV
- Published
- 2014-09
- Volume
- 21
- Issue
- 9
- Pages
- 1115-1142
- ISSN
- 1074-5521 (ISSN-L)
- OpenAlex
- W2106605095
- Cited by
- 835
- References
- 295
- Citations by year
- 2026: 101 · 2025: 82 · 2024: 103 · 2023: 111 · 2022: 103 · 2021: 88 · 2020: 65 · 2019: 50 · 2018: 51 · 2017: 27 · 2016: 37 · 2015: 14
- FWCI
- 2.15
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Chemistry & Biology (publishedVersion, public-domain)
- PubMed (publishedVersion)
- Funders
- AstraZeneca
- Uppsala Universitet
- Topics
- Life Sciences › Pharmacology, Toxicology and Pharmaceutics › Drug Discovery › Computational Drug Discovery Methods
- Life Sciences › Pharmacology, Toxicology and Pharmaceutics › Pharmaceutical Science › Drug Solubulity and Delivery Systems
- Physical Sciences › Chemistry › Organic Chemistry › Chemical Synthesis and Analysis
- Keywords
- Rule of 5, oral bioavailability, drug discovery, molecular weight, intramolecular hydrogen bonding, macrocyclization, oral dosage forms, natural products, structure-based drug design, pharmacokinetics, clinical candidates
- MeSH terms
- Administration, Oral, Biological Products, Pharmaceutical Preparations, Humans, Molecular Weight, Protease Inhibitors, Databases, Factual, Drug Delivery Systems, Macrocyclic Compounds, Drug Discovery
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