The Gut Microbiome: Connecting Spatial Organization to Function

Cited by (693)

Items 401–500 of 693

  1. Maternal Faecalibacterium pathobionts and low-fiber diets synergize to impact offspring health: implications for atopic dermatitis
    Dongju Lee, Jongwook Park, Song‐Yi Park, Junghyun Hwang, Sewon Kim, Sun-Ho Kee, Heenam Stanley Kim · 2025 · Microbiome
  2. RETRACTED: Understanding microbiota-driven oncogenesis: The role of metabolites in tumorigenesis
    Sadeeq Ullah, Chunyan Wu, Xiao Zou, Yangqing Zhong, Aftab Ahmad, Amin Ullah Jan, Yanguang Cong, Yong Chen, Lu Li · 2025 · iScience · Retracted
  3. The gut microbiome as a rainforest: probiotic colonization resistance, functional effects, and next-generation strategies
    Rebecca Lewandowski · 2026 · FEMS Microbiology Letters
  4. Exploration of pathogenic microorganism within the small intestine of necrotizing enterocolitis
    Yan Wang, Kun Jiang, Qiao Xia, Xia Kang, Shan Wang, Ji-Hong Yu, Wen-Feng Ni, Xiao-Qin Qi, Ying-Na Zhang, Jin-Bao Han et al. · 2023 · World Journal of Pediatrics
  5. A Model for Probiotic Fermented Food Production
    Maria Luisa Savo Sardaro, Silvia Zaini, Katherine Ryan Amato · 2023 · Applied Sciences
  6. Phenotypic Variability Shapes Bacterial Responses to Opposing Gradients
    L M Li, Xuanqi Zhang, Yanhong Sun, Qi Ouyang, Yuhai Tu, Chunxiong Luo · 2024 · PRX Life
  7. Spatial features of skip lesions in Crohn’s disease
    Rachel Herren, Naama Geva‐Zatorsky · 2024 · Trends in Immunology
  8. Comprehensive profiling of genomic invertons in defined gut microbial community reveals associations with intestinal colonization and surface adhesion
    Xiaofan Jin, Alice G. Cheng, Rachael B. Chanin, Feiqiao Brian Yu, Alejandra Dimas, Marissa Jasper, Allison M. Weakley, Jia Yan, Ami Siddharth Bhatt, Katherine S. Pollard · 2025 · Microbiome
  9. In mouse and in vitro models, bowel preparation promotes pathogen colonization, translocation, and exacerbation of inflammation
    Charlotte A Clayton, Imogen Porter, Bohan Deng, Giselle McCallum, Apsara Srinivas, Claire Sie, Jerry He, Alexander Pei, Dominique Tertigas, Deanna M. Pepin et al. · 2025 · Cell Reports Medicine
  10. Predicting plasmid persistence in microbial communities by coarse‐grained modeling
    Teng Wang, Andrea Weiss, Yuanchi Ha, Lingchong You · 2021 · BioEssays
  11. Effects of chlortetracycline on growth performance and intestinal functions in weaned piglets
    Hui Ling Han, Shunfen Zhang, Ruqing Zhong, Chaohua Tang, Jie Yin, Junmin Zhang, Hongfu Zhang · 2021 · Journal of Applied Microbiology
  12. RETRACTED ARTICLE: Anti-cancer activity of human gastrointestinal bacteria
    Sameer Quazi · 2022 · Medical Oncology · Retracted
  13. Biogeography of intestinal mucus-associated microbiome: Depletion of genus Pseudomonas is associated with depressive-like behaviors in female cynomolgus macaques
    Xunmin Tan, Jing Wu, Hanping Zhang, Yifan Li, Yu Huang, Peng Zheng, Peng Xie · 2024 · Journal of Advanced Research
  14. Mini-Review on the Possible Interconnections between the Gut-Brain Axis and the Infertility-Related Neuropsychiatric Comorbidities
    Gabriela Simionescu, Ovidiu‐Dumitru Ilie, Alin Stelian Ciobica, Bogdan Doroftei, Radu Maftei, Delia Grab, Jack McKenna, Nitasha Dhunna, Ioannis Asterios Mavroudis, Emil Anton · 2020 · Brain Sciences
  15. The mycobiome in murine intestine is more perturbed by food arsenic exposure than in excreted feces
    Lianxian Guo, Xinghao Dou, Rong Zou, Xuming Guo, Xiaoshan Liu, Huanwen Tang · 2020 · The Science of The Total Environment
  16. Local Immune Changes in Early Stages of Inflammation and Carcinogenesis Correlate with the Collagen Scaffold Changes of the Colon Mucosa
    Fabián Čaja, Dmitry Stakheev, Oleksandr Chernyavskiy, Lucie Kubínová, J Křižan, Jiří Dvořák, Pavel Rossmann, Renáta Štëpánková, Peter Makovický, Pavol Makovický et al. · 2021 · Cancers
  17. Spatial metabolomics of in situ, host-microbe interactions
    Benedikt Geier, Emilia M. Sogin, Dolma Michellod, Moritz Janda, Mario Kompauer, Bernhard Spengler, Nicole Dubilier, Manuel Liebeke · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  18. Predicting microbiome compositions from species assemblages through deep learning
    Sebastián Michel-Mata, Xu-Wen Wang, Yang‐Yu Liu, Marco Tulio Angulo · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  19. In situ visualization of Clostridioides difficile phenotypic heterogeneity and single-cell morphology during gut infection
    Nicholas DiBenedetto, M. Lauren Donnelly-Morell, Carol A. Kumamoto, Aimee Shen · 2026 · Nature Communications
  20. Micro-scale spatial metagenomics opens a new era in microbiome ecology
    Sarah Moraïs, Itzhak Mizrahi · 2026 · Trends in Microbiology
  21. The duodenal microbiota is compartmentalized and clinically stable yet rapidly responsive to nutrient exposure
    Jacqueline Wyss, Stefan Baehler, Jasmin Ferracini, Dino Kröll, Anne Marie Rossier, Niklas Krupka, Benjamin Misselwitz, Bahtiyar Yılmaz, Reiner Wiest · 2026 · Gut Microbes
  22. Variation in spatial organization of the gut microbiota along the longitudinal and transverse axes of the intestines
    Edward Alan Fox, Mark Lyte · 2022 · Archives of Microbiology
  23. Decoding microbial volatile signals in host–microbiome crosstalk
    Andrea Dell’Olio, Franco Biasioli A, Vincenzo Fogliano, Josep Rubert · 2025 · Trends in Endocrinology and Metabolism
  24. Coeliac Disease and Probiotics: Clinicians Need to Provide the Evidence Base for this Unmet Need
    Suneil A Raju, David Surendran Sanders, Hugo A. Penny · 2021 · Journal of Gastrointestinal and Liver Diseases
  25. Three‐Dimensional Quantitative Imaging of Native Microbiota Distribution in the Gut
    Wei Wang, Ni Zhang, Yahui Du, Juan Gao, Min Li, Liyuan Lin, Daniel Mark Czajkowsky, Xiaowei Li, Chaoyong James Yang, Zhifeng Shao · 2020 · Angewandte Chemie
  26. Probing patterning in microbial consortia with a cellular automaton for spatial organisation
    Sankalpa Venkatraghavan, Sathvik Anantakrishnan, Karthik Raman · 2022 · Scientific Reports
  27. Exploring the effect of the microbiota on the production of duck striped eggs
    Zhen Li, Qiang-Qiang Sang, Yunxiao Sun, Ying Liu, Zhuocheng Hou · 2022 · Poultry Science
  28. Bacterial community mapping of the AIA mouse gastrointestinal tract under dietary intervention with skipjack tuna (Katsuwonus pelamis) elastin peptides
    Qiaoli Wu, Bing Liu, Rongxian Yu, Xiaoling Sun, Ziyan Wang, Jun Zhou, Chenyang Lu, Haitao Wan, Jing Zhang, Jiaojiao Han et al. · 2023 · Food Bioscience
  29. Wash-Free and High-Contrast Imaging of Single-Nucleotide Variation in Single Cells Using Transcription-Amplified Light-Up RNA Aptamer
    Xuhan Xia, Feng Li, Yong Zhang, Yulin Zhu, Sishuo Song, Guiping He, Jiaqi Zhang, Qiang He, Ruijie Deng · 2023 · Analytical Chemistry
  30. Bacterial interactions on nutrient-rich surfaces in the gut lumen
    Bo Huey Chiang, Giovanni Vega, Sarah C. Dunwoody, Michael L. Patnode · 2024 · Infection and Immunity
  31. Isolation of Bacillus cereus and its probiotic effect on growth performance, antioxidant capacity, and intestinal barrier protection of broilers
    Fei Liu, Jiang Yu, Zhi Chen, Shuzhi Zhang, Yue Zhang, Lin Zhang, Yuyu Zhang, Jianda Li, Luo‐Gang Ding, Jiaqiang Wu · 2025 · Poultry Science
  32. Tuo-Min-Ding-Chuan Decoction Alleviates Asthma via Spatial Regulation of Gut Microbiota and Treg Cell Promotion
    Yanfei Hong, Zheng Yang, Zirui Liu, Na Li, Jingbo Qin, Dongyu Ge, Guiying Peng, Ji Wang, Qi Wang · 2025 · Pharmaceuticals
  33. The profiles of dysbiotic microbial communities
    Paola Brun · 2019 · AIMS Microbiology
  34. Microbiome Structure and Mucosal Morphology of Jejunum Appendix and Colon of Rats in Health and Dysbiosis
    Chenyi Shao, Xiaobo Song, Lili Wang, Hongying Zhang, Yinhui Liu, Chunhao Wang, Shenmin Chen, Bao-wei Ren, Wen Shu, Jing Xiao et al. · 2023 · Current Microbiology
  35. Modernized Tools for Streamlined Genetic Manipulation of Wild and Diverse Symbiotic Bacteria
    Travis J. Wiles, Elena S. Wall, Brandon H. Schlomann, Edouard A. Hay, R. Parthasarathy, Karen J. Guillemin · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
  36. Emergent evolutionary forces in spatial models of microbial growth in the human gut microbiota
    Olivia M. Ghosh, Benjamin H. Good · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  37. A constraint-based framework to reconstruct interaction networks in microbial communities
    Omid Oftadeh, Asli Sahin, Evangelia Vayena, Vassily Hatzimanikatis A · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  38. High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing
    Ioannis Ntekas, Lena Takayasu, David W. McKellar, Benjamin Grodner, Chase Holdener, Peter A. Schweitzer, Maya Sauthoff, Qiaojuan Shi, Ilana Brito, Iwijn De Vlaminck · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  39. Adhesive interactions within microbial consortia can be differentiated at the single-cell level through expansion microscopy
    Pu‐Ting Dong, Wenyuan Shi, Xuesong He, Gary G. Borisy · 2024 · Proceedings of the National Academy of Sciences
  40. Microalgae-MOF integrated drug delivery system for cranial radiotherapy and chemotherapy-induced brain injury
    Xuejiao Li, Jiahui Ye, Danni Zhong, Junran Xie, Zhongxiang Ding, Min Zhou · 2025 · Biomaterials
  41. A Bacteroides synthetic biology toolkit to build an in vivo malabsorption biosensor
    Giselle McCallum, Juan C. Burckhardt, Jerry He, Alice Hong, Laurent Potvin-Trottier, Carolina Tropini · 2026 · Cell
  42. Systems engineering of engineered live biotherapeutics: A discovery-to-translation framework for streamlining microbiome therapeutic development
    Noah T. Hutchinson, Zeyang Pang, Collins I. Chimezie, Brian Hamp, Amber E. Haley, Jiahe Li · 2026 · Journal of Controlled Release
  43. The Mast Cell-Aryl Hydrocarbon Receptor Interplay at the Host-Microbe Interface
    Claudio Costantini, Giorgia Renga, Vasileios Oikonomou, Giuseppe Paolicelli, Monica Borghi, Marilena Pariano, Antonella DE LUCA, Matteo Puccetti, Claudia Stincardini, Paolo Mosci et al. · 2018 · Mediators of Inflammation
  44. Response of Bacteria to Mechanical Stimuli
    С. С. Евстигнеева, Телешева Елизавета Михайловна, Д. И. Мокеев, I. V. Borisov, Lilia P. Petrova, Andrei V. Shelud’ko · 2021 · Microbiology
  45. Bacterial accumulation in intestinal folds induced by physical and biological factors
    Jinyou Yang, Toma Isaka, Kenji Kikuchi, Keiko Numayama‐Tsuruta, Takuji Ishikawa · 2024 · BMC Biology
  46. Body site-dependent variations of microbiota in pancreatic cancer pathophysiology
    Concetta Panebianco, Valerio Pazienza · 2019 · Critical Reviews in Clinical Laboratory Sciences
  47. Acute Ulcerative Enterocolitis With Severe Protein Loss Due to Mucosal Invasion With Enterococcus spp. in a Dog With Exocrine Pancreatic Insufficiency: A Case Report
    Jennifer Ann Cartwright, Jorge Pérez‐Accino, Clare L. Timothy, Kenneth William Simpson, Silke Salavati Schmitz · 2020 · Frontiers in Veterinary Science
  48. Immune activation by microbiome shapes the colon mucosa: Comparison between healthy rat mucosa under conventional and germ-free conditions
    Fabián Čaja, Dmitry Stakheev, Oleksander Chernyavskiy, Jiří Křížan, Jiří Dvořák, Pavel Rossmann, Renata Štěpánková, Peter Makovický, Pavol Makovický, Hana Kozáková et al. · 2021 · Journal of Immunotoxicology
  49. Cell–cell communication networks in tissue: Toward quantitatively linking structure with function
    Gaurav Luthria, Douglas A. Lauffenburger, Miles Aaron Miller · 2021 · Current Opinion in Systems Biology
  50. The Tempo and Mode of Adaptation in a Complex Natural Population: the Microbiome
    Nandita R. Garud · 2021 · mSystems
  51. Recent Progress on Strategies and Applications of Imaging for Intestinal Microflora
    Na Li, Xiaofeng Tan, Qinglai Yang · 2022 · Chinese Journal of Organic Chemistry
  52. Symbiotic symphony: Understanding host-microbiota dialogues in a spatial context
    Soumi Chatterjee, Steven T. Leach, Kei Lui, Archita Mishra · 2024 · Seminars in Cell and Developmental Biology
  53. Gut microbes as a therapeutic armory
    Neerupma Bhardwaj, Naama Geva‐Zatorsky · 2018 · Drug Discovery Today Disease Models
  54. Quantifying spatiotemporal dynamics and noise in absolute microbiota abundances using replicate sampling
    Brian W. Ji, Ravi U. Sheth, Purushottam D. Dixit, Harris H. Wang, Dennis Vitkup · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  55. Low-dose antibiotics can collapse gut bacterial populations via a gelation transition
    Brandon H. Schlomann, Travis J. Wiles, Elena S. Wall, Karen J. Guillemin, R. Parthasarathy · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  56. Connecting structure and function from organisms to molecules in small animal symbioses through chemo-histo-tomography
    Benedikt Geier, Janina Oetjen, Bernhard Ruthensteiner, Maxim Polikarpov, Harald R. Gruber‐Vodicka, Manuel Liebeke · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  57. Enterococcus faecalis antagonizes Pseudomonas aeruginosa growth in polymicrobial biofilms
    Casandra Ai Zhu Tan, Ling-Ning Lam, G. Biuković, Eliza Ye-Chen Soh, Xiao Wei Toh, J. Lemos, K. Kline · 2022 · bioRxiv
  58. Gnotobiotic zebrafish microbiota display inter-individual variability affecting host physiology
    Emmanuel E. Adade, Rebecca J. Stevick, David Pérez-Pascual, Jean‐Marc Ghigo, Alex M. Valm · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  59. Stable coexistence and transport of lytic phage infections with migrating bacterial hosts
    Jacopo Marchi, Chadiga Khalek, Abir George, Joshua S. Weitz, Remy Chait · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  60. An Integrated Single-Cell Atlas of the Mouse Ileum Links Nutrient Metabolism with Epithelial and Immune Crosstalk
    Yashu Tang, Peiran Lu, Winyoo Chowanadisai, Brenda Jane Smith, Janeen L. Salak‐Johnson, Edralin A. Lucas, Stephen L. Clarke, Tyrrell Conway, Minghua Tang, Dingbo Lin · 2025 · Journal of Nutrition
  61. Spatial heterogeneity determines the gastrointestinal microbiome signatures in Pekin ducks
    Haonan Zhao, Zhigang Hu, Jinlong Ru, Zezhong Wang, Jie Wei, Wei Zhou, Shuisheng Hou, Yunsheng Zhang, Xia Wang · 2025 · Poultry Science
  62. Systematic discovery of subcellular RNA patterns in the gut epithelium
    Minkyoung Lee, İlhan E. Acar, Davide Eletto, Srivathsan Adivarahan, Farah Mhamedi, Kristina Handler, Jihyun Lee, Elena Guido Vinzoni, Gustavo Aguilar, Andreas E. Moor · 2025 · Genome biology
  63. Exploring the Muco-Microbiotic Interface as a Hub for Microbial Metabolites and Immune Regulation in Gastroenteric Health and Disease
    Adelaide Carista, Melania Ionelia Gratie, Enrico Tornatore, Salvatore Accomando, Giovanni Tomasello, Domiziana Picone, Stefano Burgio, Francesco Cappello · 2025 · Cells
  64. The alteration of bile acids and gut microbiota is associated with intestinal barrier dysfunction and inflammaging in human
    Yumei Xu, Liang Zhang, T C Li, Y L Zhao, Shuo Wang, Junwen Qi, Linsen Shi · 2026 · Frontiers in Aging
  65. Boron as a Molecular Architect of Host–Microbiome Symbiosis: Implications for Dysbiosis and Aging-Related Pathologies
    George Dan Mogoşanu, Andrei Biţă, Ion Romulus Scorei, Mihai Ioan Pop, Ilie Robert Dinu, Dan Ionuţ Gheonea · 2026 · Life
  66. Dysbiosis and primary B-cell immunodeficiencies: current knowledge and future perspective
    Peng Ye, Yirui Chen, Yanzhong Wang, Wensong Wang, Sai Qiao, Jianping Lan, Manling Wang · 2023 · Immunologic Research
  67. Fiber and the gut microbiome and its impact on inflammation
    Hatice Duman, Sercan Karav · 2024 · Elsevier eBooks
  68. Fat-rich diet promotes microbiome-dependent ATP synthesis in sheep model
    Fan Hu, Kefyalew Gebeyew, Zhiwu Wu, Bingrui Chen, Jinzhen Jiao, Zhiliang Tan, Di Tian, Zhixiong He · 2025 · Journal of Animal Science and Biotechnology/Journal of animal science and biotechnology
  69. MCSPACE: inferring microbiome spatiotemporal dynamics from high-throughput co-localization data
    Gurdip Uppal, Guillaume Urtecho, Miles Richardson, Işın Y. Comba, Jeongchan Lee, Thomas U. Moody, Harris H. Wang, Georg Kurt Gerber · 2025 · Microbiome
  70. Giardiasis and post-infectious bowel syndrome
    А. А. Белова, Маргарита Дмитриевна Шестакова, Анатолий Ильич Хавкин · 2021 · Экспериментальная и клиническая гастроэнтерология
  71. Evaluation of the Stereochemistry of Staphyloferrin A for Developing Staphylococcus‐Specific Targeting Conjugates
    Tsung‐Shing Andrew Wang, Pin-Lung Chen, Yi-Chen Sarah Chen, Yu‐Wei Chiu, Zih-Jheng Lin, Chih-Yao Kao, Hsuan-Min Hung · 2024 · ChemBioChem
  72. Digestive parameters and gut microbiota load and composition along the in vivo piglet gastrointestinal tract
    Chloë Rotsaert, Yorick Minnebo, Cindy Duysburgh, LinShu Liu, Karley K. Mahalak, Jenni Firrman, Lisa M. Mattei, Ahmed M. Moustafa, Kyle L. Bittinger, Weiming Hu et al. · 2025 · Journal of Animal Science
  73. Uniform bacterial genetic diversity along the gut
    Michael Wasney, Leah Briscoe, Richard Wolff, Hans Ghezzi, Carolina Tropini, Nandita R. Garud · 2026 · Nature Communications
  74. When Cultures Meet: The Landscape of “Social” Interactions between the Host and Its Indigenous Microbes
    Naama Geva‐Zatorsky, Eran Elinav, Sven Pettersson · 2019 · BioEssays
  75. Beyond the gut
    Irina Leonardi · 2022 · Science
  76. Protocol for Creating Antibodies with Complex Fluorescence Spectra
    Madeline E. McCarthy, Caitlin M. Anglin, Heather A. Peer, Sevanna Boleman, Stephanie R. Klaubert, Marc R. Birtwistle · 2021 · Bioconjugate Chemistry
  77. Quantifying host-microbiota interactions
    Maria Zimmermann‐Kogadeeva · 2021 · Science
  78. Combinatorial Click Chemistry Labeling to Study Live Human Gut-Derived Microbiota Communities
    Haitham Hajjo, Neerupma Bhardwaj, Tal Gefen, Naama Geva‐Zatorsky · 2021 · Frontiers in Microbiology
  79. Swimming Motility and Chemotaxis Control the Spatial Organization, Persistence, and Inflammatory Activity of a Model Intestinal Pathobiont
    Travis J. Wiles, Brandon H. Schlomann, Elena S. Wall, Reina Betancourt, R. Parthasarathy, Karen J. Guillemin · 2019 · SSRN Electronic Journal
  80. Bacterial whole-cell biosensors illuminate spatially variable sialic acid availability within the inflamed mammalian gut
    David Carreño, Clare M. Robinson, Raphaella Jackson, Peirong Li, Vanessa Nunes, Susana Alejandra Palma-Duran, Emma L. Nye, James I. MacRae, David T. Riglar · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  81. Linear scaling reveals low-dimensional structure in observable microbial dynamics
    Zhengqing Zhou, Xiaoli Chen, Emrah Şimşek, Grayson S. Hamrick, Yasa Baig, Zachary A. Holmes, Z. Z. Du, David Karig, Lingchong You · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  82. Mark‐recapture of microorganisms
    John George McMullen, Jay T. Lennon · 2022 · Environmental Microbiology
  83. Optimal antimicrobial response to a changing microbial background at a mucus interface
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  84. Topological and spatial heterogeneity of gut microbiota co-abundance networks in pigs revealed by using large-scale samples
    Lin Wu, Yuxin Liu, Congying Chen, Jun Gao · 2025 · Frontiers in Microbiology
  85. Cocoa Polyphenols Modulate the Mouse Gut Microbiome in a Site-Specific Manner
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  86. Localized gut tissue and digesta bacterial communities of five pelagic fish species from the Atlantic Ocean: Insights from 16S rRNA gene diversity
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  87. Hyphal growth determines spatial organization and coexistence in a pathogenic polymicrobial community in a spatially structured environment
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  88. Pharmaco-microdynamics (PMD): Redefining dose, exposure, and control for living drug carriers
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  89. The bacterial microbiota of the gastrointestinal tract of dairy cattle: structure, functions, importance (review)
    G. A. Lihodeevskiy, P. S. Bogatova, O. E. Lihodeevskaya · 2024 · Agricultural science Euro-North-East
  90. Diet, Gut Microbes, and Cancer
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  91. Survey of gut microbial biogeography and their functional niche in the grow-finishing swine of ordinary feeding
    Lili Cao, Wei Guo, Shiyu Yang, Anum Ali Ahmad, Yuntao Dong, Cen Gong, Shuoqi Wang, Xuemin Yang, Zhentao Cheng, Zhihong Yan et al. · 2025 · Frontiers in Microbiology
  92. Mucosal Microbiome Markers of Complete Pathologic Response to Neoadjuvant Therapy in Rectal Carcinoma
    Ibrahim M. Abukhiran, Amr H. Masaadeh, James D. Byrne, Dustin E. Bosch · 2025 · Cancer Research Communications
  93. Fitness advantage of sequential metabolic strategies emerges from community interactions in strongly fluctuating environments
    Zihan Wang, Yu Fu, Akshit Goyal, Sergei Maslov · 2026 · PLoS Computational Biology
  94. The Therapeutic Potential of the “Yin-Yang” Garden in Our Gut
    Shabarinath Srikumar, Séamus Fanning · 2019 · IntechOpen eBooks
  95. Fungi make fun guys
    Sarah L. Gaffen, Partha Sarathi Biswas · 2022 · Cell Host & Microbe
  96. Antimicrobial peptides in the gut–brain axis: A straightforward review to unravel some missing links
    Fabiano Pinheiro da Silva, Ewerton Vinícius Macarini Bruzaferro, Niels Olsen Saraiva Câmara · 2020 · Journal of Neuroscience Research
  97. Host mucin glycosylation and gut symbiosis
    Nathalie Juge, Dimitrios Latousakis, Emmanuelle H. Crost · 2024 · Elsevier eBooks
  98. Microfluidics in Microbiome and Cancer Research
    Barath Udayasuryan, Daniel Joseph Slade, Scott S. Verbridge · 2019
  99. Growth inhibition of Akkermansia muciniphila by a secreted pathobiont sialidase
    Guus H. van Muijlwijk, Emma Bröring, Guido van Mierlo, Pascal W.T.C. Jansen, Michiel Vermeulen, Piet C. Aerts, Jos P. M. van Putten, Noah W. Palm, Marcel R. de Zoete · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  100. Biodiversity and antimicrobial activity of intestinal fungi from three species of coral reef fishes
    Jinying Wu, Zihui Chen, E-Na Zeng, Mo Li, Zu-Wang Sun, Yi-Zhuo Wang, Xiaoyong Zhang · 2022 · Research Square