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Cited by 128Per- and polyfluoroalkyl substances researchMicrobial bioremediation and biosurfactantsMicrobial Community Ecology and Physiology

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Metagenomic analysis of soil microbial community under PFOA and PFOS stress

Cai, Yanping, Chen, Huilun, Yuan, Rongfang, Wang, Fei, Chen, Zhongbing, Zhou, Beihai·2020·Environmental Research
DOI 10.1016/j.envres.2020.109838
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Abstract

Perfluorinated compounds (PFCs) contamination of soil has attracted global attention in recent years but influences of PFCs on microorganisms in the soil environment have not been fully described. In this study, the effects of perfluorooctane sulphonate (PFOS) and perfluoroctanoic acid (PFOA) on bacterial communities were determined by Illumina Miseq sequencing and Illumina Hiseq Xten. The stimulation of PFCs pollutants on soil bacterial richness and community diversity were observed. Sequencing information indicated that Proteobacteria, Acidobacteria, Actinobacteria, Chloroflexi, Firmicutes, and Gemmatimonadetes were the dominant bacterial phyla. Two genera, Bacillus and Sphingomonas, exhibited adverse responses toward PFCs pollution. Carbohydrate-active enzymes (CAZy), Kyoto Encyclopedia of Genes and Genomes (KEGG) and NCBI databases were used to elucidate the proteins and function action of soil microbial to PFCs pollution. Pathways such as Carbohydrate metabolism, Global and overview maps and Membrane transport in the soil microbes were affected by PFCs stress. CAZy analysis revealed that glycosyl transferases (GTs) in PFCs-polluted soils showed more active, while glycoside hydrolases (GHs) were inhibited severely.

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Metadata

Authors
Cai, Y., Chen, H., Yuan, R., Wang, F., Chen, Z., & Zhou, B.
Affiliations
  • University of Science and Technology Beijing (CN)
  • Czech University of Life Sciences Prague (CZ)
Corresponding author
  • Chen, Huilun
  • Zhou, Beihai
ORCID
Venue
Environmental Research
Publisher
Elsevier BV
Published
2020-09
Volume
188
Pages
109838
ISSN
0013-9351 (ISSN-L)
DOI
10.1016/j.envres.2020.109838
OpenAlex
W3039644962
Cited by
128
References
61
Citations by year
2026: 24 · 2025: 34 · 2024: 16 · 2023: 20 · 2022: 22 · 2021: 10 · 2020: 2
FWCI
5.00
Type
journal article
Language
en
Open access
closed
Licence
Locations
  • Environmental Research (publishedVersion)
  • PubMed (publishedVersion)
Funders
Beijing Municipal Natural Science Foundation
Topics
  • Physical Sciences › Environmental Science › Environmental Chemistry › Per- and polyfluoroalkyl substances research
  • Physical Sciences › Environmental Science › Pollution › Microbial bioremediation and biosurfactants
  • Physical Sciences › Environmental Science › Ecology › Microbial Community Ecology and Physiology
Keywords
perfluorooctanoic acid, PFOS, perfluorinated compounds, soil microbial communities, soil bacteria, bacterial diversity, bacterial richness, carbohydrate-active enzymes, glycosyltransferases, glycoside hydrolases, carbohydrate metabolism, membrane transport, Bacillus, Sphingomonas, soil contamination
MeSH terms
Fluorocarbons, Soil, Soil Microbiology, Soil Pollutants, Alkanesulfonic Acids, Microbiota

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