The DOI matches its Crossref record; 29 of the 29 references it cites were found in a registry or an index.
Development of a forensically useful age prediction method based on DNA methylation analysis
Open accessAbstract
Forensic DNA phenotyping needs to be supplemented with age prediction to become a relevant source of information on human appearance. Recent progress in analysis of the human methylome has enabled selection of multiple candidate loci showing linear correlation with chronological age. Practical application in forensic science depends on successful validation of these potential age predictors. In this study, eight DNA methylation candidate loci were analysed using convenient and reliable pyrosequencing technology. A total number of 41 CpG sites was investigated in 420 samples collected from men and women aged from 2 to 75 years. The study confirmed correlation of all the investigated markers with human age. The five most significantly correlated CpG sites in ELOVL2 on 6p24.2, C1orf132 on 1q32.2, TRIM59 on 3q25.33, KLF14 on 7q32.3 and FHL2 on 2q12.2 were chosen to build a prediction model. This restriction allowed the technical analysis to be simplified without lowering the prediction accuracy significantly. Model parameters for a discovery set of 300 samples were R(2)=0.94 and the standard error of the estimate=4.5 years. An independent set of 120 samples was used to test the model performance. Mean absolute deviation for this testing set was 3.9 years. The number of correct predictions ±5 years achieved a very high level of 86.7% in the age category 2-19 and gradually decreased to 50% in the age category 60-75. The prediction model was deterministic for individuals belonging to these two extreme age categories. The developed method was implemented in a freely available online age prediction calculator.
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Cites
DNA methylation age of human tissues and cell types
Horvath, S. (2013) · Genome Biology · doi:10.1186/gb-2013-14-10-r115 · Cited by 7,075
Genome-wide methylation profiles reveal quantitative views of human aging rates
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DNA methylation age of blood predicts all-cause mortality in later life
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TRIM family proteins and their emerging roles in innate immunity
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Aging of blood can be tracked by DNA methylation changes at just three CpG sites
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Methylation of ELOVL 2 gene as a new epigenetic marker of age
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Continuous Aging of the Human DNA Methylome Throughout the Human Lifespan
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Cited by
DNA methylation-based biomarkers and the epigenetic clock theory of ageing
Horvath, S., & Raj, K. (2018) · Nature Reviews Genetics · doi:10.1038/s41576-018-0004-3 · Cited by 3,095
Genome-wide association studies identify 137 genetic loci for DNA methylation biomarkers of aging
McCartney, D. L., Min, J. L., Richmond, R. C., Lu, A. T., Sobczyk, M. K., Davies, G., Broer, L., Guo, X., Jeong, A., Jung, J., et al. (2021) · Genome Biology · doi:10.1186/s13059-021-02398-9 · Cited by 292
Bekaert, B., Kamalandua, A., Zapico, S. C., Van de Voorde, W., & Decorte, R. (2015) · Epigenetics · doi:10.1080/15592294.2015.1080413 · Cited by 276
Jung, S.-E., Lim, S. M., Hong, S. R., Lee, E. H., Shin, K.-J., & Lee, H. Y. (2019) · Forensic Science International: Genetics · doi:10.1016/j.fsigen.2018.09.010 · Cited by 202
Spólnicka, M., Pośpiech, E., Pepłońska, B., Zbieć-Piekarska, R., Makowska, Ż., Pięta, A., Karłowska-Pik, J., Ziemkiewicz, B., Wężyk, M., Gasperowicz, P., et al. (2018) · International Journal of Legal Medicine · doi:10.1007/s00414-017-1636-0 · Cited by 105
Self-citation
Metadata
- Authors
- Zbieć-Piekarska, R., Spólnicka, M., Kupiec, T., Parys-Proszek, A., Makowska, Ż., Pałeczka, A., Kucharczyk, K., Płoski, R., & Branicki, W.
- Venue
- Forensic Science International: Genetics
- Publisher
- Elsevier BV
- Published
- 2015-07
- Volume
- 17
- Pages
- 173-179
- ISSN
- 1872-4973 (ISSN-L)
- OpenAlex
- W1639076783
- Cited by
- 354
- References
- 29
- FWCI
- 12.75
- Type
- journal article
- Language
- en
- Open access
- green
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