The DOI matches its Crossref record; 60 of the 60 references it cites were found in a registry or an index.
Ten years of pan-genome analyses
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Citations
Cites
Application of Phylogenetic Networks in Evolutionary Studies
Huson, D. H., & Bryant, D. (2006) · Molecular Biology and Evolution · doi:10.1093/molbev/msj030 · Cited by 8,830
OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes
Li, L., Stoeckert, C. J., & Roos, D. S. (2003) · Genome Research · doi:10.1101/gr.1224503 · Cited by 5,707
Whole-Genome Random Sequencing and Assembly of Haemophilus influenzae Rd
Fleischmann, R. D., Adams, M. D., White, O., Clayton, R. A., Kirkness, E. F., Kerlavage, A. R., Bult, C. J., Tomb, J.-F., Dougherty, B. A., Merrick, J. M., et al. (1995) · Science · doi:10.1126/science.7542800 · Cited by 5,654
On the Origin of Species by Means of Natural Selection
Livezey, R. L., & Darwin, C. (1953) · American Midland Naturalist · doi:10.2307/2485224 · Cited by 5,405
Woese, C. R. (1987) · Microbiological Reviews · doi:10.1128/mr.51.2.221-271.1987 · Cited by 5,042
Mauve: Multiple alignment of conserved genomic sequence with rearrangements
Darling, A. C. E., Mau, B., Blattner, F. R., & Perna, N. T. (2004) · Genome Research · doi:10.1101/gr.2289704 · Cited by 4,949
Maiden, M. C. J., Bygraves, J. A., Feil, E., Morelli, G., Russell, J. E., Urwin, R., Zhang, Q., Zhou, J., Zurth, K., Caugant, D. A., et al. (1998) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.95.6.3140 · Cited by 3,833
A Genomic Perspective on Protein Families
Tatusov, R. L., Koonin, E. V., & Lipman, D. J. (1997) · Science · doi:10.1126/science.278.5338.631 · Cited by 3,590
Systematics and the Origin of Species: On Ernst Mayr's 100th Anniversary
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Tettelin, H., Masignani, V., Cieslewicz, M. J., Donati, C., Medini, D., Ward, N. L., Angiuoli, S. V., Crabtree, J., Jones, A. L., Durkin, A. S., et al. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0506758102 · Cited by 2,631
Self-citation
Cited by
Roary: rapid large-scale prokaryote pan genome analysis
Page, A. J., Cummins, C. A., Hunt, M., Wong, V. K., Reuter, S., Holden, M. T. G., Fookes, M., Falush, D., Keane, J. A., & Parkhill, J. (2015) · Bioinformatics · doi:10.1093/bioinformatics/btv421 · Cited by 5,736
Genomic variation in 3,010 diverse accessions of Asian cultivated rice
Wang, W., Mauleon, R., Hu, Z., Chebotarov, D., Tai, S., Wu, Z., Li, M., Zheng, T., Fuentes, R. R., Zhang, F., et al. (2018) · Nature · doi:10.1038/s41586-018-0063-9 · Cited by 1,748
BPGA- an ultra-fast pan-genome analysis pipeline
Chaudhari, N. M., Gupta, V. K., & Dutta, C. (2016) · Scientific Reports · doi:10.1038/srep24373 · Cited by 988
Microreact: visualizing and sharing data for genomic epidemiology and phylogeography
Argimón, S., Abudahab, K., Goater, R. J. E., Fedosejev, A., Bhai, J., Glasner, C., Feil, E. J., Holden, M. T. G., Yeats, C. A., Grundmann, H., et al. (2016) · Microbial Genomics · doi:10.1099/mgen.0.000093 · Cited by 732
A review of methods and databases for metagenomic classification and assembly
Breitwieser, F. P., Lu, J., & Salzberg, S. L. (2019) · Briefings in Bioinformatics · doi:10.1093/bib/bbx120 · Cited by 566
Metadata
- Authors
- Vernikos, G., Medini, D., Riley, D. R., & Tettelin, H.
- Venue
- Current Opinion in Microbiology
- Publisher
- Elsevier BV
- Published
- 2015-02
- Volume
- 23
- Pages
- 148-154
- ISSN
- 1369-5274 (ISSN-L)
- OpenAlex
- W2091328482
- Cited by
- 623
- References
- 60
- FWCI
- 2.05
- Type
- journal article
- Language
- en
- Open access
- closed
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- CoChat. (2026). Citation check: Ten years of pan-genome analyses. https://app.cochat.ai/papers/10.1016/j.mib.2014.11.016
- The paper
- Vernikos, G., Medini, D., Riley, D. R., & Tettelin, H. (2015). Ten years of pan-genome analyses. Current Opinion in Microbiology. https://doi.org/10.1016/j.mib.2014.11.016
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
