The DOI matches its Crossref record; 39 of the 39 references it cites were found in a registry or an index.
Evolutionarily Conserved Multisubunit RBL2/p130 and E2F4 Protein Complex Represses Human Cell Cycle-Dependent Genes in Quiescence
Open accessAbstract
The mammalian Retinoblastoma (RB) family including pRB, p107, and p130 represses E2F target genes through mechanisms that are not fully understood. In D. melanogaster, RB-dependent repression is mediated in part by the multisubunit protein complex Drosophila RBF, E2F, and Myb (dREAM) that contains homologs of the C. elegans synthetic multivulva class B (synMuvB) gene products. Using an integrated approach combining proteomics, genomics, and bioinformatic analyses, we identified a p130 complex termed DP, RB-like, E2F, and MuvB (DREAM) that contains mammalian homologs of synMuvB proteins LIN-9, LIN-37, LIN-52, LIN-54, and LIN-53/RBBP4. DREAM bound to more than 800 human promoters in G0 and was required for repression of E2F target genes. In S phase, MuvB proteins dissociated from p130 and formed a distinct submodule that bound MYB. This work reveals an evolutionarily conserved multisubunit protein complex that contains p130 and E2F4, but not pRB, and mediates the repression of cell cycle-dependent genes in quiescence.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“The pocket proteins p107 and p130, together with E2F4, are members of the multiprotein repressor complex DREAM that binds cell cycle genes during quiescence.104, 105, 106”
From Census and evaluation of p53 target genes (2017) · cites this paper as [104]
Citations
Cites
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
Irizarry, R. A. (2003) · Biostatistics · doi:10.1093/biostatistics/4.2.249 · Cited by 10,603
DAVID: Database for Annotation, Visualization, and Integrated Discovery
Dennis, G., Sherman, B. T., Hosack, D. A., Yang, J., Gao, W., Lane, H. C., & Lempicki, R. A. (2003) · Genome Biology · doi:10.1186/gb-2003-4-5-p3 · Cited by 9,327
Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
Dai, M. (2005) · Nucleic Acids Research · doi:10.1093/nar/gni179 · Cited by 1,807
Genome-wide analysis of estrogen receptor binding sites
Carroll, J. S., Meyer, C. A., Song, J. S., Li, W., Geistlinger, T., Eeckhoute, J., Brodsky, A. S., Keeton, E. K., Fertuck, K. C., Hall, G., et al. (2006) · Nature Genetics · doi:10.1038/ng1901 · Cited by 1,397
Self-citationE2F integrates cell cycle progression with DNA repair, replication, and G 2 /M checkpoints
Ren, B., Cam, H., Takahashi, Y., Volkert, T., Terragni, J., Young, R. A., & Dynlacht, B. D. (2002) · Genes & Development · doi:10.1101/gad.949802 · Cited by 1,125
The retinoblastoma tumour suppressor in development and cancer
Classon, M., & Harlow, E. (2002) · Nature Reviews Cancer · doi:10.1038/nrc950 · Cited by 738
The E2F transcriptional network: old acquaintances with new faces
Dimova, D. K., & Dyson, N. J. (2005) · Oncogene · doi:10.1038/sj.onc.1208612 · Cited by 715
Pocket proteins and cell cycle control
Cobrinik, D. (2005) · Oncogene · doi:10.1038/sj.onc.1208619 · Cited by 601
Model-based analysis of tiling-arrays for ChIP-chip
Johnson, W. E., Li, W., Meyer, C. A., Gottardo, R., Carroll, J. S., Brown, M. A., & Liu, X. S. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0601180103 · Cited by 428
Self-citationPapp, B., & Müller, J. (2006) · Genes & Development · doi:10.1101/gad.388706 · Cited by 410
Molecular mechanisms of E2F-dependent activation and pRB-mediated repression
Frolov, M. V., & Dyson, N. J. (2004) · Journal of Cell Science · doi:10.1242/jcs.01227 · Cited by 402
Florens, L. A., Carrozza, M. J., Swanson, S. K., Fournier, M. L., COLEMAN, M., Workman, J. L., & Washburn, M. P. (2006) · Methods · doi:10.1016/j.ymeth.2006.07.028 · Cited by 345
Self-citationA Common Set of Gene Regulatory Networks Links Metabolism and Growth Inhibition
Cam, H., Balciunaite, E., Blais, A., Spektor, A., Scarpulla, R. C., Young, R., Kluger, Y., & Dynlacht, B. D. (2004) · Molecular Cell · doi:10.1016/j.molcel.2004.09.037 · Cited by 322
Elkon, R., Linhart, C., Sharan, R., Ron Shamir, A., & Shiloh, Y. (2003) · Genome Research · doi:10.1101/gr.947203 · Cited by 297
Rayman, J. B., Takahashi, Y., Indjeian, V. B., Dannenberg, J.-H., Catchpole, S., Watson, R. J., te Riele, H., & Dynlacht, B. D. (2002) · Genes & Development · doi:10.1101/gad.969202 · Cited by 288
Korenjak, M., Taylor‐Harding, B., Binné, U. K., Satterlee, J. S., Nolan-Stevaux, O., Aasland, R., White‐Cooper, H., Dyson, N. J., & Brehm, A. (2004) · Cell · doi:10.1016/j.cell.2004.09.034 · Cited by 285
Identification of a Drosophila Myb-E2F2/RBF transcriptional repressor complexPreprint
Lewis, P. W., Beall, E. L., Fleischer, T. C., Georlette, D., Link, A. J., & Botchan, M. R. (2004) · Genes & Development · doi:10.1101/gad.1255204 · Cited by 259
Proteomic Analysis by Multidimensional Protein Identification Technology
Florens, L. A., & Washburn, M. P. (2006) · Humana Press eBooks · doi:10.1385/1-59745-026-x:159 · Cited by 242
Self-citationp107 and p130: Versatile Proteins with Interesting Pockets
Classon, M., & Dyson, N. J. (2001) · Experimental Cell Research · doi:10.1006/excr.2000.5135 · Cited by 241
Dimova, D. K., Nolan-Stevaux, O., Frolov, M. V., & Dyson, N. J. (2003) · Genes & Development · doi:10.1101/gad.1116703 · Cited by 235
Role for a Drosophila Myb-containing protein complex in site-specific DNA replication
Beall, E. L., Manak, J. R., Zhou, S., Bell, M., Lipsick, J. S., & Botchan, M. R. (2002) · Nature · doi:10.1038/nature01228 · Cited by 223
Smith, E. J., Leone, G., DeGregori, J., Jakoi, L., & Nevins, J. R. (1996) · Molecular and Cellular Biology · doi:10.1128/mcb.16.12.6965 · Cited by 218
CEAS: cis-regulatory element annotation system
Ji, X., Li, W., Song, J. S., Wei, L., & Liu, X. S. (2006) · Nucleic Acids Research · doi:10.1093/nar/gkl322 · Cited by 207
Self-citationNURD-complex genes antagonise Ras-induced vulval development in Caenorhabditis elegans
Solari, F., & Ahringer, J. (2000) · Current Biology · doi:10.1016/s0960-9822(00)00343-2 · Cited by 153
Harrison, M. M., Ceol, C. J., Lu, X., & Horvitz, H. R. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0608461103 · Cited by 142
Poulin, G. B., Yan, D., Fraser, A. G., Hopper, N. A., & Ahringer, J. (2005) · The EMBO Journal · doi:10.1038/sj.emboj.7600726 · Cited by 130
Osterloh, L., von Eyß, B., Schmit, F., Rein, L., Hübner, D., Samans, B., Hauser, S., & Gaubatz, S. (2006) · The EMBO Journal · doi:10.1038/sj.emboj.7601478 · Cited by 123
Pocket protein complexes are recruited to distinct targets in quiescent and proliferating cells
Balciunaite, E., Spektor, A., Lents, N. H., Cam, H., te Riele, H., Scime, A., Rudnicki, M. A., Young, R., & Dynlacht, B. D. (2005) · Molecular and Cellular Biology · doi:10.1128/mcb.25.18.8166-8178.2005 · Cited by 116
C. elegans Class B Synthetic Multivulva Genes Act in G 1 Regulation
Boxem, M., & van den Heuvel, S. (2002) · Current Biology · doi:10.1016/s0960-9822(02)00844-8 · Cited by 92
Retinoblastoma family proteins: insights gained through genetic manipulation of mice
Wikenheiser-Brokamp, K. A. (2006) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-005-5487-3 · Cited by 85
Beall, E. L., Bell, M., Georlette, D., & Botchan, M. R. (2004) · Genes & Development · doi:10.1101/gad.1206604 · Cited by 80
Taylor‐Harding, B., Binné, U. K., Korenjak, M., Brehm, A., & Dyson, N. J. (2004) · Molecular and Cellular Biology · doi:10.1128/mcb.24.20.9124-9136.2004 · Cited by 65
Inhibition of oncogenic transformation by mammalian Lin‐9, a pRB‐associated protein
Gagrica, S., Hauser, S., Kolfschoten, I., Osterloh, L., Agami, R., & Gaubatz, S. (2004) · The EMBO Journal · doi:10.1038/sj.emboj.7600470 · Cited by 63
Co-repressor complexes and remodelling chromatin for repression
Wolffe, A. P., Urnov, F. D., & Guschin, D. Y. (2000) · Biochemical Society Transactions · doi:10.1042/bst0280379 · Cited by 61
Glycogen Synthase Kinase 3 Phosphorylates RBL2/p130 during Quiescence
Litovchick, L., Chestukhin, A., & DeCaprio, J. A. (2004) · Molecular and Cellular Biology · doi:10.1128/mcb.24.20.8970-8980.2004 · Cited by 58
Self-citationCyclin E2, the cycle continues
Payton, M. N., & Coats, S. (2002) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/s1357-2725(01)00137-6 · Cited by 57
The cerberus-related gene, Cerr1, is not essential for mouse head formation
Shawlot, W., Deng, J. M., Wakamiya, M., & Behringer, R. R. (2000) · genesis · doi:10.1002/(sici)1526-968x(200004)26:4 · Cited by 56
Mip/LIN-9 Regulates the Expression of B-Myb and the Induction of Cyclin A, Cyclin B, and CDK1
Pilkinton, M. A., Sandoval, R., Song, J., Ness, S. A., & Colamonici, O. R. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m609924200 · Cited by 55
Ceol, C. J., Stegmeier, F. P., Harrison, M. M., & Horvitz, H. R. (2006) · Genetics · doi:10.1534/genetics.106.056465 · Cited by 45
Flagged first, then by citations
Cited by
Sorted by citations
Mechanisms of Cellular Senescence: Cell Cycle Arrest and Senescence Associated Secretory Phenotype
Kumari, R., & Jat, P. (2021) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2021.645593 · Cited by 1,622
Control of cell cycle transcription during G1 and S phases
Bertoli, C., Skotheim, J. M., & de Bruin, R. A. M. (2013) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3629 · Cited by 1,567
Census and evaluation of p53 target genes
Fischer, M. (2017) · Oncogene · doi:10.1038/onc.2016.502 · Cited by 971
Cell cycle arrest through indirect transcriptional repression by p53: I have a DREAM
Engeland, K. (2017) · Cell Death and Differentiation · doi:10.1038/cdd.2017.172 · Cited by 679
Molecular mechanisms underlying RB protein function
Dick, F. A., & Rubin, S. M. (2013) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3567 · Cited by 598
Metadata
- Authors
- Litovchick, L., Sadasivam, S., Florens, L., Zhu, X., Swanson, S. K., Velmurugan, S., Chen, R., Washburn, M. P., Liu, X. S., & DeCaprio, J. A.
- Affiliations
- Brigham and Women's Hospital (US)
- Stowers Institute for Medical Research (US)
- Chinese Academy of Sciences (CN)
- Harvard University (US)
- Corresponding author
- DeCaprio, James A.
- ORCID
- Venue
- Molecular Cell
- Publisher
- Elsevier BV
- Published
- 2007-05
- Volume
- 26
- Issue
- 4
- Pages
- 539-551
- ISSN
- 1097-2765 (ISSN-L)
- OpenAlex
- W2156397151
- Cited by
- 396
- References
- 39
- Citations by year
- 2026: 7 · 2025: 18 · 2024: 17 · 2023: 16 · 2022: 28 · 2021: 31 · 2020: 24 · 2019: 17 · 2018: 17 · 2017: 23 · 2016: 21 · 2015: 14 · 2014: 17 · 2013: 26 · 2012: 34
- FWCI
- 9.45
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- www.elsevier.com/tdm/userlicense/1.0/ (tdm)
- www.elsevier.com/legal/tdmrep-license (tdm)
- www.elsevier.com/open-access/userlicense/1.0/ (vor, 2269 d)
- doi.org/10.15223/policy-017 (stm-asf)
- doi.org/10.15223/policy-037 (stm-asf)
- doi.org/10.15223/policy-012 (stm-asf)
- doi.org/10.15223/policy-029 (stm-asf)
- doi.org/10.15223/policy-004 (stm-asf)
- Locations
- Molecular Cell (publishedVersion)
- PubMed (publishedVersion)
- Funders
- U.S. Public Health Service (HG004069-01, PO1 CA50661, RO1 CA063113)
- Topics
- Health Sciences › Medicine › Oncology › Cancer-related Molecular Pathways
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Chromatin Remodeling and Cancer
- Keywords
- E2F4, DREAM complex, retinoblastoma protein family, cell cycle-dependent gene expression, quiescence, G0 phase, Drosophila melanogaster, Caenorhabditis elegans, promoter binding
- MeSH terms
- Animals, Cell Cycle, Drosophila melanogaster, Gene Expression Regulation, Humans, Mutation, Neoplasms, Repressor Proteins, Suppression, Genetic, Gene Expression Regulation, Neoplastic, Retinoblastoma Protein, Cellular Senescence, Conserved Sequence, Caenorhabditis elegans, Gene Deletion, Evolution, Molecular, Proteome, Protein Subunits, E2F4 Transcription Factor, Retinoblastoma-Like Protein p130, Crk-Associated Substrate Protein, Kv Channel-Interacting Proteins
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review