Cited by 88EEG and Brain-Computer InterfacesBlind Source Separation TechniquesECG Monitoring and Analysis

IC-U-Net: A U-Net-based Denoising Autoencoder Using Mixtures of Independent Components for Automatic EEG Artifact Removal

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Chuang, Chun-Hsiang, Chang, Kong-Yi, Huang, Chih-Sheng, Jung, Tzyy-Ping·2022·NeuroImage

Abstract

Electroencephalography (EEG) signals are often contaminated with artifacts. It is imperative to develop a practical and reliable artifact removal method to prevent the misinterpretation of neural signals and the underperformance of brain-computer interfaces. Based on the U-Net architecture, we developed a new artifact removal model, IC-U-Net, for removing pervasive EEG artifacts and reconstructing brain signals. IC-U-Net was trained using mixtures of brain and non-brain components decomposed by independent component analysis. It uses an ensemble of loss functions to model complex signal fluctuations in EEG recordings. The effectiveness of the proposed method in recovering brain activities and removing various artifacts (e.g., eye blinks/movements, muscle activities, and line/channel noise) was demonstrated in a simulation study and four real-world EEG experiments. IC-U-Net can reconstruct a multi-channel EEG signal and is applicable to most artifact types, offering a promising end-to-end solution for automatically removing artifacts from EEG recordings. It also meets the increasing need to image natural brain dynamics in a mobile setting. The code and pre-trained IC-U-Net model are available at https://github.com/roseDwayane/AIEEG.

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  1. Bengio, Y., Courville, A., Vincent, P., 2013. Representation learning: A review and new perspectives. IEEE Transactions on Patterns Analysis and Michine Intelligence 35, 17981828.
  2. Bledowski, C., Prvulovic, D., Hoechstetter, K., Scherg, M., Wibral, M., Goebel, R., Linden, D.E.J., 2004. Localizing P300 generators in visual target and distractor processing: A combined event-related potential and functional magnetic resonance imaging study. Journal of Neuroscience 24, 9353-9360.
  3. Chang, C.Y., Hsu, S.H., Pion-Tonachini, L., Jung, T.P., 2020. Evaluation of artifact subspace reconstruction for automatic artifact components removal in multi-channel EEG recordings. IEEE Transactions on Biomedical Engineering 67, 1114-1121.
  4. Chatzichristos, C., Dan, J., Narayanan, A.M., Seeuws, N., Vandecasteele, K., Vos, M.D., Bertrand, A., Huffel, S.V., 2020. Epileptic seizure detection in EEG via fusion of multi-view attention-gated U-Net deep neural networks. 2020 IEEE Signal Processing in Medicine and Biology Symposium (SPMB), pp. 1-7.
  5. Chiang, H., Hsieh, Y., Fu, S., Hung, K., Tsao, Y., Chien, S., 2019. Noise reduction in ECG signals using fully convolutional denoising autoencoders. IEEE Access 7, 60806-60813.
  6. Delorme, A., Makeig, S., 2004. EEGLAB: An open source toolbox for analysis of single-trial EEG dynamics including independent component analysis. Journal of Neuroscience Methods 134, 9-21.
  7. Fitzgibbon, S.P., Powers, D.M., Pope, K.J., Clark, C.R., 2007. Removal of EEG noise and artifact using blind source separation. Journal of Clinical Neurophysiology 24, 232-243.
  8. Glorot, X., Bordes, A., Bengio, Y., 2011. Deep sparse rectifier neural networks. In: Geoffrey, G., David, D., Miroslav, D. (Eds.), Proceedings of the Fourteenth International Conference on Artificial Intelligence and Statistics. PMLR, Proceedings of Machine Learning Research, pp. 315-323.
  9. Gu, X., Cao, Z., Jolfaei, A., Xu, P., Wu, D., Jung, T.P., Lin, C.T., 2021. EEG-based brain-computer interfaces (BCIs): A survey of recent studies on signal sensing technologies and computational intelligence approaches and their applications. IEEE/ACM Transactions on Computational Biology and Bioinformatics 18, 1645-1666.
  10. Guan, S., Khan, A.A., Sikdar, S., Chitnis, P.V., 2020. Fully dense UNet for 2-D sparse photoacoustic tomography artifact removal. IEEE Journal of Biomedical and Health Informatics 24, 568-576.
  11. Gurrola-Ramos, J., Dalmau, O., Alarcón, T.E., 2021. A residual dense U-Net neural network for image denoising. IEEE Access 9, 31742-31754.
  12. Gwin, J.T., Gramann, K., Makeig, S., Ferris, D.P., 2010. Removal of movement artifact from highdensity EEG recorded during walking and running. Journal of Neurophysiology 103, 35263534.
  13. Jiang, X., Bian, G.-B., Tian, Z., 2019. Removal of artifacts from EEG signals: A review. Sensors 19, 1-18.
  14. Leite, N.M.N., Pereira, E.T., Gurjão, E.C., Veloso, L.R., 2018. Deep convolutional autoencoder for EEG noise filtering. 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pp. 2605-2612.
  15. Lin, C.-T., Huang, C.-S., Yang, W.-Y., Singh, A.K., Chuang, C.-H., Wang, Y.-K., 2018. Real-time EEG signal enhancement using canonical correlation analysis and Gaussian mixture clustering. Journal of Healthcare Engineering 2018, 1-11.
  16. Lu, X., Tsao, Y., Matsuda, S., Hori, C., 2013. Speech enhancement based on deep denoising autoencoder. INTERSPEECH, Lyon, France, pp. 436-440.
  17. Makeig, S., Bell, A., Jung, T.-P., Sejnowski, T., 1996. Independent component analysis of electroencephalographic data. Advances in Neural Information Processing Systems 8, 145151.
  18. Perslev, M., Jensen, M.H., Darkner, S., Jennum, P.J., Igel, C., 2019. U-Time: A fully convolutional network for time series segmentation applied to sleep staging. Proceedings of the 33rd International Conference on Neural Information Processing Systems (NeurIPS 2019), Vancouver, Canada, pp. 1-12.
  19. Radüntz, T., Scouten, J., Hochmuth, O., Meffert, B., 2015. EEG artifact elimination by extraction of ICA-component features using image processing algorithms. Journal of Neuroscience Methods 243, 84-93.
  20. Rashid, M., Sulaiman, N., P. P. Abdul Majeed, A., Musa, R.M., Ab. Nasir, A.F., Bari, B.S., Khatun, S., 2020. Current status, challenges, and possible solutions of EEG-based brain-computer interface: A comprehensive review. Frontiers in Neurorobotics 14, 1-35.
  21. Ronneberger, O., Fischer, P., Brox, T., 2015. U-Net: Convolutional networks for biomedical image degmentation. Springer International Publishing, Cham, pp. 234-241.
  22. Shorten, C., Khoshgoftaar, T.M., 2019. A survey on image data augmentation for deep learning. Journal of Big Data 6, 1-48.
  23. Vincent, P., Larochelle, H., Lajoie, I., Bengio, Y., Manzagol, P.-A., 2010. Stacked denoising autoencoders: Learning useful representations in a deep network with a local denoising criterion. Journal of Machine Learning Research 11, 3371-3408.
  24. von Bunau, P., Meinecke, F.C., Scholler, S., Muller, K.R., 2010. Finding stationary brain sources in EEG data. 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology, pp. 2810-2813.
  25. Xu, Z.-Q.J., Zhang, Y., Luo, T., Xiao, Y., Ma, Z., 2019. Frequency principle: Fourier analysis sheds light on deep neural networks. arXiv preprint arXiv:1901.06523. · arXiv
  26. You, J., Jiang, D., Ma, Y., Wang, Y., 2021. SpindleU-Net: An adaptive U-Net framework for sleep spindle detection in single-channel EEG. IEEE Transactions on Neural Systems and Rehabilitation Engineering 29, 1614-1623.
  27. Zeng, K., Chen, D., Ouyang, G., Wang, L., Liu, X., Li, X., 2016. An EEMD-ICA approach to enhancing artifact rejection for noisy multivariate neural data. IEEE Transactions on Neural Systems and Rehabilitation Engineering 24, 630-638.
  28. Zhang, H., Zhao, M., Wei, C., Mantini, D., Li, Z., Liu, Q., 2021. EEGdenoiseNet: A benchmark dataset for deep learning solutions of EEG denoising. Journal of Neural Engineering 18, 116.

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Authors
Chuang, C.-H., Chang, K.-Y., Huang, C.-S., & Jung, T.-P.
Affiliations
  • National Tsing Hua University (TW)
  • National Taiwan Ocean University (TW)
  • National Taipei University of Technology (TW)
  • University of California San Diego (US)
Corresponding author
Chuang, Chun-Hsiang
Venue
NeuroImage
Publisher
Elsevier BV
Published
2022-11
Volume
263
Pages
119586
ISSN
1053-8119 (ISSN-L)
OpenAlex
W3217407136
Cited by
88
References
3
Citations by year
2026: 26 · 2025: 29 · 2024: 22 · 2023: 10 · 2022: 1
FWCI
7.99
Type
journal article
Language
en
Open access
Locations
  • NeuroImage (publishedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • arXiv (Cornell University) (submittedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
  • arXiv (Cornell University)
Funders
  • Ministry of Science and Technology, Taiwan (109-2636-E-007-022, 110-2636-E-007-018)
  • National Tsing Hua University
Topics
  • Life Sciences › Neuroscience › Cognitive Neuroscience › EEG and Brain-Computer Interfaces
  • Physical Sciences › Computer Science › Signal Processing › Blind Source Separation Techniques
  • Health Sciences › Medicine › Cardiology and Cardiovascular Medicine › ECG Monitoring and Analysis
Keywords
EEG artifact removal, U-Net, denoising autoencoder, independent component analysis, line noise, channel noise, brain-computer interface, wearable EEG
MeSH terms
Algorithms, Blinking, Electroencephalography, Eye Movements, Humans, Signal Processing, Computer-Assisted, Artifacts

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