The DOI matches its Crossref record; 9 of the 9 references it cites were found in a registry or an index.
A methodology to derive global maps of leaf traits using remote sensing and climate data
Open accessAbstract
This paper introduces a modular processing chain to derive global high-resolution maps of leaf traits. In particular, we present global maps at 500 m resolution of specific leaf area, leaf dry matter content, leaf nitrogen and phosphorus content per dry mass, and leaf nitrogen/phosphorus ratio. The processing chain exploits machine learning techniques along with optical remote sensing data (MODIS/Landsat) and climate data for gap filling and up-scaling of in-situ measured leaf traits. The chain first uses random forests regression with surrogates to fill gaps in the database (> 45% of missing entries) and maximizes the global representativeness of the trait dataset. Plant species are then aggregated to Plant Functional Types (PFTs). Next, the spatial abundance of PFTs at MODIS resolution (500 m) is calculated using Landsat data (30 m). Based on these PFT abundances, representative trait values are calculated for MODIS pixels with nearby trait data. Finally, different regression algorithms are applied to globally predict trait estimates from these MODIS pixels using remote sensing and climate data. The methods were compared in terms of precision, robustness and efficiency. The best model (random forests regression) shows good precision (normalized RMSE≤ 20%) and goodness of fit (averaged Pearson's correlation R = 0.78) in any considered trait. Along with the estimated global maps of leaf traits, we provide associated uncertainty estimates derived from the regression models. The process chain is modular, and can easily accommodate new traits, data streams (traits databases and remote sensing data), and methods. The machine learning techniques applied allow attribution of information gain to data input and thus provide the opportunity to understand trait-environment relationships at the plant and ecosystem scales. The new data products – the gap-filled trait matrix, a global map of PFT abundance per MODIS gridcells and the high-resolution global leaf trait maps – are complementary to existing large-scale observations of the land surface and we therefore anticipate substantial contributions to advances in quantifying, understanding and prediction of the Earth system.
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Cites
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High-Resolution Global Maps of 21st-Century Forest Cover Change
Hansen, M. C., Potapov, P. V., Moore, R., Hancher, M., Turubanova, S. A., Tyukavina, A., Thau, D., Stehman, S. V., Goetz, S. J., Loveland, T. R., et al. (2013) · Science · doi:10.1126/science.1244693 · Cited by 11,704
The worldwide leaf economics spectrum
Wright, I. J., Reich, P. B., Westoby, M., Ackerly, D. D., Baruch, Z., Bongers, F., Cavender-Bares, J., Chapin, T., Cornelissen, J. H. C., Diemer, M., et al. (2004) · Nature · doi:10.1038/nature02403 · Cited by 9,021
Self-citationMissForest—Non-parametric missing value imputation for mixed-type data
Stekhoven, D. J., & Bühlmann, P. (2012) · Bioinformatics · doi:10.1093/bioinformatics/btr597 · Cited by 6,156
Random forests for classification in ecology
Cutler, D. R., Edwards, T. C., Beard, K. H., Cutler, A., Hess, K. T., Gibson, J., & Lawler, J. J. (2007) · Ecology · doi:10.1890/07-0539.1 · Cited by 4,950
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Variable selection using random forests
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“At the organismal level, plant traits, which are measurable morphological, anatomical, physiological and phenological characteristics, can influence the establishment, fitness, and survival of individuals (Westoby, 1998; Reich et al., 2007; Violle et al., 2007; Homolova et al., 2013).”
BackgroundSchrodt, F., Kattge, J., Shan, H., Fazayeli, F., Joswig, J., Banerjee, A., Reichstein, M., Bönisch, G., Díaz, S., Dickie, J., et al. (2015) · Global Ecology and Biogeography · doi:10.1111/geb.12335 · Cited by 206
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Cited by
Machine learning-based global maps of ecological variables and the challenge of assessing them
Meyer, H., & Pebesma, E. (2022) · Nature Communications · doi:10.1038/s41467-022-29838-9 · Cited by 310
Assessing and improving the transferability of current global spatial prediction models
Ludwig, M., Moreno‐Martinez, A., Hölzel, N., Pebesma, E., & Meyer, H. (2023) · Global Ecology and Biogeography · doi:10.1111/geb.13635 · Cited by 92
kNNDM CV: k-fold nearest-neighbour distance matching cross-validation for map accuracy estimation
Linnenbrink, J., Milà, C., Ludwig, M., & Meyer, H. (2024) · Geoscientific Model Development · doi:10.5194/gmd-17-5897-2024 · Cited by 51
Metadata
- Authors
- Moreno-Martínez, Á., Camps-Valls, G., Kattge, J., Robinson, N., Reichstein, M., van Bodegom, P., Kramer, K., Cornelissen, J. H. C., Reich, P., Bahn, M., Niinemets, Ü., Peñuelas, J., Craine, J. M., Cerabolini, B. E. L., Minden, V., Laughlin, D. C., Sack, L., Allred, B., Baraloto, C., Byun, C., Soudzilovskaia, N. A., & Running, S. W.
- Venue
- Remote Sensing of Environment
- Publisher
- Elsevier BV
- Published
- 2018-12
- Volume
- 218
- Pages
- 69-88
- ISSN
- 0034-4257 (ISSN-L)
- OpenAlex
- W2894470772
- Cited by
- 232
- References
- 9
- FWCI
- 10.32
- Type
- journal article
- Language
- en
- Open access
- bronze
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- Moreno-Martínez, Á., Camps-Valls, G., Kattge, J., Robinson, N., Reichstein, M., van Bodegom, P., Kramer, K., Cornelissen, J. H. C., Reich, P., Bahn, M., Niinemets, Ü., Peñuelas, J., Craine, J. M., Cerabolini, B. E. L., Minden, V., Laughlin, D. C., Sack, L., Allred, B., Baraloto, C., . . . Running, S. W. (2018). A methodology to derive global maps of leaf traits using remote sensing and climate data. Remote Sensing of Environment. https://doi.org/10.1016/j.rse.2018.09.006
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