Chromatin dynamics during liver regeneration
Abstract
Liver regeneration is the most important reaction of the liver to an injury. Indeed, the liver possesses an extraordinary regenerative capacity orchestrated by a highly coordinated response of all the different cell types in order to recover the tissue lost, while maintaining homeostasis and all the hepatic functions. To achieve this impressive physiological accomplishment, the liver experiences a transient but precisely controlled transcriptional reprogramming that allows the simultaneous activation and silencing of multiple genes at different stages of the regeneration process. Epigenetic events play a fundamental role in the organization of chromatin architecture and hence in the tight control of gene transcription. In this review, we will summarize the most relevant epigenetic modifications associated with the critical changes in gene expression and cellular behavior occurring during liver regeneration. We will discuss the relevance of DNA methylation, histone modifications, and chromatin remodelers, and the interplay between these epigenetic events, during the regeneration process, mainly after partial hepatectomy or after chemical injury.
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Hepatocyte proliferation and the cell cycle are also regulated by DNA methylation.
“Hepatocyte proliferation and the cell cycle are also regulated by DNA methylation.95”
From Distinct hepatocyte identities in liver homeostasis and regeneration (2023) · cites this paper as [95]
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Michalopoulos, G. K. (2007) · Journal of Cellular Physiology · doi:10.1002/jcp.21172 · Cited by 1,384 · see citing works
HDACs, histone deacetylation and gene transcription: from molecular biology to cancer therapeutics
Gallinari, P., Marco, S. D., Jones, P., Pallaoro, M., & Steinkühler, C. (2007) · Cell Research · doi:10.1038/sj.cr.7310149 · Cited by 678 · see citing works
PPARβ/δ: linking metabolism to regeneration
Magadum, A., & Engel, F. B. (2018) · International Journal of Molecular Sciences · doi:10.3390/ijms19072013 · Cited by 110 · see citing works
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Epigenetics in hepatocellular carcinoma development and therapy: The tip of the iceberg
Fernández-Barrena, M. G., Arechederra, M., Colyn, L., Berasain, C., & Avila, M. A. (2020) · JHEP Reports · doi:10.1016/j.jhepr.2020.100167 · Cited by 126 · see citing works
Self-citationHan, I. C., Burnight, E. R., Ulferts, M. J., Worthington, K. S., Russell, S. R., Sohn, E. H., Mullins, R. F., Stone, E. M., Tucker, B. A., & Wiley, L. A. (2019) · Human Gene Therapy · doi:10.1089/hum.2019.159 · Cited by 30 · see citing works
Distinct hepatocyte identities in liver homeostasis and regeneration
Chen, F., Schönberger, K., & Tchorz, J. S. (2023) · JHEP Reports · doi:10.1016/j.jhepr.2023.100779 · Cited by 30 · see citing works
- Authors
- Arechederra, M., Berasain, C., Avila, M. A., & Fernández-Barrena, M. G.
- Affiliations
- Instituto de Salud Carlos III (ES)
- Corresponding author
- Berasain, Carmen
- Avila, Matias A.
- Venue
- Seminars in Cell & Developmental Biology
- Publisher
- Elsevier BV
- Published
- 2020-01
- Volume
- 97
- Pages
- 38-46
- ISSN
- 1084-9521 (ISSN-L)
- OpenAlex
- W2939708481
- Cited by
- 28
- References
- 3
- Citations by year
- 2026: 4 · 2025: 8 · 2024: 2 · 2023: 5 · 2022: 4 · 2021: 1 · 2020: 3 · 2019: 1
- FWCI
- 0.29
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Seminars in Cell and Developmental Biology (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Ministerio de Economía y Competitividad, Spain (SAF 2014-54191R, SAF 2016-75972R, SAF 2017-88933R)
- Instituto de Salud Carlos III (FIS PI16/01126, PI16/00598)
- Fundación La Caixa Hepacare Project
- Fundación Eugenio Rodríguez Pascual
- Fundación M. Torres
- Fundación Echébano
- Fundación Mario Losantos
- Topics
- Health Sciences › Medicine › Hepatology › Liver physiology and pathology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Epigenetics and DNA Methylation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Keywords
- liver regeneration, chromatin dynamics, epigenetic modifications, DNA methylation, histone modifications, chromatin remodeling, transcriptional reprogramming, partial hepatectomy, chemical liver injury, gene expression regulation
- MeSH terms
- Chromatin, Humans, Liver Regeneration, Epigenesis, Genetic
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