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The rhizosphere microbiome and plant health
Open accessAbstract
The diversity of microbes associated with plant roots is enormous, in the order of tens of thousands of species. This complex plant-associated microbial community, also referred to as the second genome of the plant, is crucial for plant health. Recent advances in plant-microbe interactions research revealed that plants are able to shape their rhizosphere microbiome, as evidenced by the fact that different plant species host specific microbial communities when grown on the same soil. In this review, we discuss evidence that upon pathogen or insect attack, plants are able to recruit protective microorganisms, and enhance microbial activity to suppress pathogens in the rhizosphere. A comprehensive understanding of the mechanisms that govern selection and activity of microbial communities by plant roots will provide new opportunities to increase crop production.
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“Microbiomes of plants, rhizosphere, or soil have been elucidated by large-scale, DNA sequencing-based metagenomics approaches [7, 15, 16], but the contributions and functions of the large majority of the species are still mostly unknown.”
From Competition assays and physiological experiments of soil and phyllosphere yeasts identify Candida subhashii as a novel antagonist of filamentous fungi (2017) · cites this paper as [16]
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Metadata
- Authors
- Berendsen, R. L., Pieterse, C. M. J., & Bakker, P. A. H. M.
- Affiliations
- Utrecht University (NL)
- Venue
- Trends in Plant Science
- Publisher
- Elsevier BV
- Published
- 2012-08
- Volume
- 17
- Issue
- 8
- Pages
- 478-486
- ISSN
- 1360-1385 (ISSN-L)
- OpenAlex
- W2017387862
- Cited by
- 5,347
- References
- 96
- Citations by year
- 2026: 587 · 2025: 545 · 2024: 570 · 2023: 546 · 2022: 565 · 2021: 573 · 2020: 509 · 2019: 395 · 2018: 289 · 2017: 240 · 2016: 173 · 2015: 147 · 2014: 114 · 2013: 79 · 2012: 7
- FWCI
- 11.84
- Type
- journal article
- Language
- en
- Open access
- green
- dspace.library.uu.nl
- Licence
- Locations
- Trends in Plant Science (publishedVersion)
- PubMed (publishedVersion)
- Utrecht University Repository (Utrecht University) (submittedVersion)
- Utrecht University Repository (Utrecht University) (submittedVersion, other-oa)
- Funders
- FP7 Ideas: European Research Council (269072)
- Topics
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant-Microbe Interactions and Immunity
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Mycorrhizal Fungi and Plant Interactions
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Legume Nitrogen Fixing Symbiosis
- Keywords
- rhizosphere microbiome, plant health, plant-microbe interactions, root-associated microorganisms, plant defense against pathogens, plant defense against insects, plant-associated microbial communities, crop production
- MeSH terms
- Anti-Infective Agents, Fungi, Plant Diseases, Plants, Pseudomonas, Rhizobiaceae, Soil Microbiology, Species Specificity, Plant Roots, Host-Pathogen Interactions, Metagenome, Microbial Interactions, Rhizosphere, Biota
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