Rocks and clocks: calibrating the Tree of Life using fossils and molecules

Cited by (422)

Items 201–300 of 422

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5. Calibrations from the Fossil Record
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6. Mahonia vs. Berberis Unloaded: Generic Delimitation and Infrafamilial Classification of Berberidaceae Based on Plastid Phylogenomics
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7. Phylogeny, divergence times and biogeography of window flies (Scenopinidae) and the therevoid clade (Diptera: Asiloidea)
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8. Molecular paleobiology of early-branching animals: integrating DNA and fossils elucidates the evolutionary history of hexactinellid sponges
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9. The Trouble with Topology: Phylogenies without Fossils Provide a Revisionist Perspective of Evolutionary History in Topological Analyses of Diversity
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10. Molecular Cloning and Transcript Expression of Genes Encoding Two Types of Lipoprotein Lipase in the Ovary of Cutthroat Trout,Oncorhynchus clarki
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12. The Implications of Lineage-Specific Rates for Divergence Time Estimation
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14. Critiquing blind dating: the dangers of over-confident date estimates in comparative genomics
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15. Phylogeny and evolution of aldehyde dehydrogenase-homologous folate enzymes
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16. Evolutionary expansion of the Ras switch regulatory module in eukaryotes
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17. Comparative Structures and Evolution of Vertebrate Carboxyl Ester Lipase (CEL) Genes and Proteins with a Major Role in Reverse Cholesterol Transport
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18. The stepwise Indian–Eurasian collision and uplift of the Himalayan‐Tibetan plateau drove the diversification of high‐elevation Scytodes spiders
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19. CladeDate : Calibration information generator for divergence time estimation
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20. Comparative Studies of Vertebrate Beta Integrin Genes and Proteins: Ancient Genes in Vertebrate Evolution
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21. Where Fossils Dare and Males Matter: combined morphological and molecular analysis untangles the evolutionary history of the spider ant genus Leptomyrmex Mayr (Hymenoptera : Dolichoderinae)
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22. Molecular dates require geologic testing
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23. The stem catarrhine Saadanius does not inform the timing of the origin of crown catarrhines
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24. To what extent do new fossil discoveries change our understanding of clade evolution? A cautionary tale from burying beetles (Coleoptera:Nicrophorus)
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26. Biogeography and the molecular dating game: a futile revival of phenetics?
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27. Molecular Clocks: Determining the Age of the Human–Chimpanzee Divergence
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28. Fossil grebes from the T ruckee F ormation ( M iocene) of N evada and a new phylogenetic analysis of P odicipediformes ( A ves)
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30. Inaccurate fossil placement does not compromise tip‐dated divergence times
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31. Phylogenetic tree statistics: A systematic overview using the new R package ‘treestats’
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32. Genetic Basis and Evolutionary Forces of Sexually Dimorphic Color Variation in a Toad-Headed Agamid Lizard
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33. Comparative Studies of Vertebrate Platelet Glycoprotein 4 (CD36)
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34. Paleozoic diversification of terrestrial chitin-degrading bacterial lineages
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35. New insights into the phylogeny and biogeography of subfamily Orontioideae (Araceae)
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36. Insights from Empirical Analyses and Simulations on Using Multiple Fossil Calibrations with Relaxed Clocks to Estimate Divergence Times
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37. Vertebrate hepatic lipase genes and proteins: a review supported by bioinformatic studies
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38. Evolutionary expansion of structurally complex DNA sequences.
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39. Time-calibrated molecular phylogeny reveals a Miocene–Pliocene diversification in the Amazon miniature killifish genus Fluviphylax (Cyprinodontiformes: Cyprinodontoidei)
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40. Phylogeny, taxonomy, and evolution of the endothelin receptor gene family
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41. Phylogeny modulates the effects of ecological conditions on group living across hystricognath rodents
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42. Rocks and clocks revised: New promises and challenges in dating the primate tree of life
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43. Improvement of molecular phylogenetic inference and the phylogeny of Bilateria
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44. Do freshwater ecoregions and continental shelf width predict patterns of historical gene flow in the freshwater fishPoecilia butleri?
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45. Global invasion history of the Mediterranean recluse spider: a concordance with human expansion
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46. Comparative genomics and evolutionary diversification of the duplicated fabp6a and fabp6b genes in medaka and three-spined stickleback
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47. Opossum carboxylesterases: sequences, phylogeny and evidence for CES gene duplication events predating the marsupial-eutherian common ancestor
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48. The Molecular Clock as a Tool for Understanding Host-Parasite Evolution
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49. Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of Life
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50. A calibrated chronology of biochemistry reveals a stem line of descent responsible for planetary biodiversity
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51. Radiation and extinction: investigating clade dynamics in deep time
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52. The evolutionary history of parasitic sucking lice and their rodent hosts: A case of evolutionary co‐divergences
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53. Beyond the Age of Fishes
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54. Vertebrate patatin-like phospholipase domain-containing protein 4 (PNPLA4) genes and proteins: a gene with a role in retinol metabolism
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55. How Old Are Sunflowers? A Molecular Clock Analysis of Key Divergences in the Origin and Diversification of Helianthus (Asteraceae)
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56. Deconstructing the long‐standing a priori assumption that serial homology generally involves ancestral similarity followed by anatomical divergence
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57. Comparative genomic organization and tissue-specific transcription of the duplicatedfabp7andfabp10genes in teleost fishes
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58. Establishing a New SpeciesEncephalitozoon pogonaefor the Microsporidian Parasite of Inland Bearded DragonPogona vitticepsAhl 1927 (Reptilia, Squamata, Agamidae)
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59. Extending the paleontology–biogeography reciprocity with SDMs: Exploring models and data in reducing fossil taxonomic uncertainty
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60. Fossils, molecules, divergence times, and the origin of Salamandroidea
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61. An Enigmatic Neodiapsid Reptile from the Middle Triassic of England
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62. Relict groups of spiny frogs indicate Late Paleogene-Early Neogene trans-Tibet dispersal of thermophile faunal elements
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63. Deciphering deuterostome phylogeny: molecular, morphological, and palaeontological perspectives
    Andrew Benjamin Smith, Billie J. Swalla · 2009 · Oxford University Press eBooks
64. The evolution of nervous system centralization
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65. Bayesian tip-dated timeline for diversification and major biogeographic events in Muroidea (Rodentia), the largest mammalian radiation
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66. Integrating Fossils Samples with Heterogeneous Diversification Rates: A Combined Multi-Type Fossilized Birth-Death model
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67. Ediacaran fossils in Meso- and Paleoproterozoic rocks in peninsular India extend Darwin
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68. Vertebrate endothelial lipase: comparative studies of an ancient gene and protein in vertebrate evolution
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69. An ancient hybridization event reconciles mito-nuclear discordance among spiral-horned antelopes
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70. The Ediacaran emergence of bilaterians: congruence between the genetic and the geological fossil records
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71. Comparative evolutionary genomics of medaka and three-spined sticklebackfabp2aandfabp2bgenes withfabp2of zebrafish
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72. A Simulation-Based Evaluation of Total-Evidence Dating Under the Fossilized Birth-Death Process
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73. Molecular paleobiology — Progress and perspectives
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74. A Genomic Perspective on the Evolutionary Diversification of Turtles
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75. Proterozoic microfossils continue to provide new insights into the rise of complex eukaryotic life
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76. Genomic organization and transcription of the medaka and zebrafish cellular retinol-binding protein (rbp) genes
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77. Duplicated crabp1 and crabp2 genes in medaka (Oryzias latipes): Gene structure, phylogenetic relationship and tissue-specific distribution of transcripts
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78. Novel Integrative Modeling of Molecules and Morphology across Evolutionary Timescales
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79. The Genetic Diversity and the Divergence Time in Extant Primitive Mayfly, Siphluriscus chinensis Ulmer, 1920 Using the Mitochondrial Genome
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80. Models of the Superior Olivary Complex
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81. The first ptychanthoid Lejeuneaceae in Miocene Mexican amber
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83. Biogeographical Origin and Speciation of theAnthocoris nemorumGroup
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85. Marine invertebrate lipases: Comparative and functional genomic analysis
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86. A Double-Edged Sword: Evolutionary Novelty Along Deep-Time Diversity Oscillation in an Iconic Group of Predatory Insects (Neuroptera: Mantispoidea)
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87. Chronospaces: An R package for the statistical exploration of divergence times promotes the assessment of methodological sensitivity
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88. Indian monsoon drove the dispersal of the thoracica group of Scytodes spitting spiders
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89. Surviving Mass Extinctions through Biomineralized DNA.
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90. A review of fossil Bursidae and their use for phylogeny calibration
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91. Population Genomics of Speciation and Adaptation in Sunflowers
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92. A Phylogeographic Assessment of the Malagasy Giant Chameleons (Furcifer verrucosus and Furcifer oustaleti)
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93. Five well-supported fossil calibrations within the "Waterbird" assemblage (Tetrapoda, Aves)
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94. Landscape-explicit phylogeography illuminates the ecographic radiation of early archosauromorph reptiles
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95. Complex patterns of gene flow and convergence in the evolutionary history of the spiral-horned antelopes (Tragelaphini)
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96. Bioinformatic studies of vertebrate enolases: multifunctional genes and proteins
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97. Variation in the Substitution Rates among the Human Mitochondrial Haplogroup U Sublineages
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98. A novel specimen-based mid-Paleozoic dataset of antiarch placoderms (the most basal jawed vertebrates)
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99. Coevolution of post‐Palaeozoic arthropod basibiont diversity and encrusting bryozoan epibiont diversity?
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100. Animal Evolution
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