Rocks and clocks: calibrating the Tree of Life using fossils and molecules
Cited by (422)
Items 301–400 of 422
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- Comparative Cladistics: Fossils, Morphological Data Partitions and Lost Branches in the Fossil Tree of LifeRoss Mounce · 2017
- Molecular Clock CalibrationRachel C. M. Warnock · 2013 · Springer eBooks
- Bayesian Selection of Relaxed-Clock Models: Distinguishing between Independent and Autocorrelated RatesMuthukumaran Panchaksaram, Lucas A. Freitas, Mario dos Reis · 2024 · Systematic Biology
- Fossil Calibration of Mitochondrial Phylogenetic Relationships of North American Pine Martens, Martes, Suggests an Older Divergence of M. americana and M. caurina than Previously HypothesizedLeigha M. Lynch · 2019 · Journal of Mammalian Evolution
- Genetic Adaptations of an Island Pit-Viper to a Unique Sedentary Life with Extreme Seasonal Food AvailabilityBin Lu, Xiaoping Wang, Jinzhong Fu, Jing‐Song Shi, Yayong Wu, Yin Qi · 2020 · G3 Genes Genomes Genetics
- Ancient deep ocean as a harbor of biotic innovation revealed by Carboniferous ophiuroid microfossilsBen Thuy, Larry W. Knox, Lea D. Numberger-Thuy, Nicholas S. Smith, Colin D. Sumrall · 2023 · Geology
- Fossilization processes have little impact on tip‐calibrated divergence time analysesJoseph E. O’Reilly, Philip C. J. Donoghue · 2021 · Palaeontology
- Integrated analysis of fossils and molecular divergence time estimates a latest Jurassic origin of angiospermsRuolin Wu, Sandra Álvarez-Carretero, Yue Tong, Shan Wan, Harald Schneider, James Clark, Davide Pisani, Daniele Silvestro, Philip C. J. Donoghue · 2026 · Nature Plants
- Grassland expansions promoted global diversification of the Pardosa wolf spiders during the late Cenozoic (Araneae, Lycosidae)Lijuan Liu, Dan Fu, Yufa Luo · 2024 · Zoosystematics and Evolution
- IL-1 Superfamily Across 400+ Species: Therapeutic Targets and Disease ImplicationsWeibin Wang, Dawei Li, Kaiyong Luo, Baozheng Chen, Tingting Hao, Xuzhen Li, Dazhong Guo, Yang Dong, Ning Yu · 2025 · Biology
- Uncertainty in the timing of diversification of flowering plants rests with equivocal interpretation of their fossil recordJames Clark, Philip C. J. Donoghue · 2025 · Royal Society Open Science
- A new fossil species of Clypeaster (Echinoidea) from Malaysian Borneo and an overview of the Central Indo-Pacific echinoid fossil recordMorana Mihaljević, Alana J. Rosenblatt · 2018 · Swiss Journal of Palaeontology
- The Concept of the Modern Molecular Clock and Experience in Estimating Divergence Times of Eulipotyphla and RodentiaAnna A. Bannikova, Vladimir S. Lebedev · 2022 · Biology Bulletin Reviews
- Biotic vs abiotic origin of unusual features from Mesoproterozoic of Vindhyan Supergroup, IndiaAdrita Choudhuri, Abderrazak El Albani, Sabyasachi Mandal, Subir Sarkar · 2023 · Annales de Paléontologie
- The evolution of developmental gene networks: lessons from comparative studies on holometabolous insectsAndrew Peel · 2009 · Oxford University Press eBooks
- Reply to Phillips et al.Maria M. Bauzà-Ribot, Carlos Juan, Francesco Nardi, Pedro Oromı́, Joan Pons, Damià Jaume · 2013 · Current Biology
- Cambrian ExplosionMaría Gabriela Mángano, Luís A. Buatois · 2020 · Elsevier eBooks
- Molecular Clocks: Determining the Age of the Human–Chimpanzee DivergenceMichael I. Jensen‐Seaman, Kathryn A Hooper‐Boyd · 2008 · Encyclopedia of Life Sciences
- The legacy of the paleotropical flora belt: extreme continental vicariance and island refugia in Woodwardioid fernsGuillermo Santos, Mario Fernández‐Mazuecos, Cornélia Krause, Sonia Molino, Anita Roth‐Nebelsick, Mike Thiv, Mario Mairal · 2026 · Molecular Phylogenetics and Evolution
- Fossil record of Celastraceae: evaluation and potential use in molecular calibrationsAna Lilia Hernández-Damián, Sandra Luz Gómez‐Acevedo, Sergio R.S. Cevallos-Ferriz · 2021 · Botanical Sciences
- First assessment of genetic diversity, population structure and historical population dynamics ofMyocastor coypus(Rodentia: Echimyidae) in the centre of its native rangeEzequiel A. Ibañez, Diego M. Peralta, Graciela Obregón, Maximiliano Nardelli, Juan Ignacio Túnez · 2021 · Biological Journal of the Linnean Society
- On the systematic position of the Early Cretaceous fern genus “Athyrium”Chunxiang Li, Junye Ma, Jiasheng Hao, Qun Yang · 2022 · Palaeoworld
- Constraining Whole-Genome Duplication Events in Geological TimeJames Clark, Philip C. J. Donoghue · 2023 · Methods in molecular biology
- Global expansion of a solitary‐social tropical spitting spider shaped by multiple long‐distance dispersalsYu-Fa Luo, Shuqiang Li · 2023 · Ecography
- Is it inappropriate to ask for your age? Evaluating parameter impact on tree dating in a challenging clade (Macroscelidea)Justus Hagemann, Michael Hofreiter, Faysal Bibi, Patricia A. Holroyd, Patrick Arnold · 2023 · Molecular Phylogenetics and Evolution
- Backbone phylogeny and evolution of Lycosidae (Araneae): New insights from phylogenomic analyses of mitogenomic dataLijuan Liu, Dan Fu, Ze‐Hong Tao, Yufa Luo · 2025 · Journal of Systematics and Evolution
- Genetics and Regeneration in VertebratesElizabeth D. Hutchins, K. Kusumi · 2016 · Springer eBooks
- Molecular data in systematics: a promise fulfilled, a future beckoningWard C. Wheeler, Gonzalo Giribet · 2016 · Cambridge University Press eBooks
- The origins and evolution of the EcdysozoaMaximilian J. Telford, Sarah J. Bourlat, Andrew D. Economou, Daniel Papillon, Omar Rota‐Stabelli · 2009 · Oxford University Press eBooks
- Origins of metazoan body plans: the larval revolutionRudolf A. Raff · 2009 · Oxford University Press eBooks
- Paleontology: Outrunning TimeJohn E. Huss · 2017 · Boston studies in the philosophy of science
- Fossil kōura ( Paranephrops ?planifrons White 1842) (Crustacea: Decapoda: Parastacidae) from the Nukumaruan marginal‐marine Hautotara Formation, southeastern WairarapaKatie S. Collins, Annemieke L. H. Hendriks, Michael F. Gazley · 2018 · New Zealand Journal of Geology and Geophysics
- Oligocene‑Miocene Scleractinians from the Central Indo-Pacific: Malaysian Borneo and the PhilippinesMorana Mihaljević · 2019 · Palaeontologia Electronica
- Phylogenetic AnalysesChristoph Bleidorn · 2017 · Springer eBooks
- Geographical Relations of the Chilean FloraAndrés Moreira‐Muñoz · 2010 · Plant and vegetation
- Phylogeny of the Marine isopod genus Idotea in the Northeast Atlantic Ocean and Mediterranean SeaAna Isabel Leal Natal · 2015 · Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)
- Beyesian molecular dating with genomic dataTianqi Zhu · 2019 · Scientia Sinica Vitae
- Evolutionary and Developmental Perspectives on the Origin and Diversification of the Vertebrate CerebellumYasunori Murakami, Fumiaki Sugahara · 2021 · Contemporary clinical neuroscience
- Ancient deep ocean as a harbor of biotic innovation revealed by Carboniferous ophiuroid microfossilsBen Thuy, Larry W. Knox, Lea D. Numberger-Thuy, Nicholas S. Smith, Colin D. Sumrall · 2023 · Geology
- What does the tree of life look like as it grows? Evolution and the multifractality of timeKevin Hudnall, Raissa M. D’Souza · 2025 · Journal of Theoretical Biology
- Evolution of Vertebrate Endocrine and Neuronal Gene Families : Focus on Pituitary and RetinaDaniel Ocampo Daza · 2013
- Anciently duplicated genes reduce uncertainty in molecular clock estimatesOlga Zhaxybayeva · 2013 · Proceedings of the National Academy of Sciences
- Reassembling animal evolution: a four-dimensional puzzleMaximilian J. Telford, Dallen J. Timothy, D. Timothy J. Littlewood · 2009 · Oxford University Press eBooks
- Conserved developmental processes and the evolution of novel traits: wounds, embryos, veins, and butterfly eyespotsPatrícia Beldade, Suzanne V. Saenko · 2009 · Oxford University Press eBooks
- Phylogenetics and the Integration of Paleontology Within the Life SciencesChristopher A. Brochu, Colin D. Sumrall · 2008 · The Paleontological Society Papers
- Molecular Markers and Taxonomic Explosion in Herpetology: More or Less Robust Taxonomy? True and False Advantages of DNA MarkersDavid Tarkhnishvili · 2024 · International Journal of Zoology and Animal Biology
- †Eorhopalosoma lohrmanni, a new species of Rhopalosomatidae from mid-Cretaceous amber of Northern Myanmar (Hymenoptera, Aculeata: Vespoidea)Brendon Elias Boudinot, Darian R Dungey · 2019 · Cretaceous Research
- A biogeographic view on Southeast Asia's historyBjörn Stelbrink · 2015
- A Fundamentally New Perspective on the Origin and Evolution of LifeShi V. Liu · 2008 · arXiv (Cornell University)
- Beyond Congruence: Evidential Integration and Inferring the Best Evolutionary ScenarioArsham Nejad Kourki · 2021 · Preprints.org
- The authors replyJohn Ross Wilson, Şerban Procheş, Brigitte Braschler, Edd S Dixon, David M. Richardson · 2008 · Frontiers in Ecology and the Environment
- Inaccurate fossil placement does not compromise tip-dated divergence timesNicolás Mongiardino Koch, Russell J. Garwood, Luke A. Parry · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Empreintes des changements environnementaux sur la phylogéographie du genre Myrtus en Méditerranée et au SaharaJérémy Migliore · 2011 · theses.fr (ABES)
- New Insight into the Demography History, Evolution, and Phylogeography of Horseshoe Crabs with Special Emphasis on American SpeciesJosé Manuel García‐Enriquez, Salima Machkour‐M’Rabet, Yann Hénaut, Sophie Calmé, Julia María Lesher-Gordillo · 2025 · Diversity
- Improved genome assembly of whale shark, the world’s biggest fish: revealing intragenomic heterogeneity in molecular evolutionYawako W. Kawaguchi, Rui Matsumoto, S. Kuraku · 2026 · GigaScience
- What it takes to solve the origins of life: An integrated review. Part 2: Theoretical methods and emerging trendsSilke Asche, Carla Bautista, Celia Blanco, David Boulesteix, Alexandre Champagne-Ruel, Cole Mathis, Omer Markovitch, Zhen Peng, Avinash Vicholous Dass, Alyssa Adams et al. · 2026 · Cell Reports Physical Science
- Genetic population structure and demographic history of an endangered frog, Babina holstiRyosuke Kakehashi, Takeshi Igawa, Masayuki Sumida · 2015 · Conservation Genetics
- Vertebrate scavenger receptor class B member 2 (SCARB2): comparative studies of a major lysosomal membrane glycoproteinRoger S. Holmes · 2012
- Demystifying the marine‐terrestrial biodiversity gradient: response to Vermeij et al.Elizabeth Christina Miller, John J. Wiens · 2018 · Ecology Letters
- Population genetic structure and demographic history of the East Asian wolf spider Pardosa astrigeraDan Fu, Lijuan Liu, Ying Cheng, Haodong Chen, Yufa Luo · 2024 · Zoosystematics and Evolution
- Zegar molekularny w teorii i praktyce: przewodnik dla początkujących..Weronika Wrzesińska, Tomasz Mamos, Michał Grabowski · 2018 · Kosmos
- INACCURATE FOSSIL PLACEMENT DOES NOT COMPROMISE TIP-DATED DIVERGENCE TIMESUC San Diego, Nicolás Mongiardino Koch, Russell J. Garwood, Russell J. Garwood, Luke A. Parry, Luke A. Parry · 2022 · Abstracts with programs - Geological Society of America
- New Perspectives on the Evolution of Late Palaeozoic and Mesozoic Terrestrial TetrapodsTom S. Kemp · 2010 · Lecture notes in earth sciences
- Beyond linear sequence comparisons: the use of genome-level characters for phylogenetic reconstructionJeffrey L. Boore, Susan I. Fuerstenberg · 2009 · Oxford University Press eBooks
- Evolution of marsupial biodiversityManuela Cascini · 2020 · Queensland University of Technology
- Molecular Clock CalibrationRachel C. M. Warnock · 2015 · Encyclopedia of earth sciences series/Encyclopedia of earth sciences
- The animal in the genome: comparative genomics and evolutionRichard R. Copley · 2009 · Oxford University Press eBooks
- Diversity and Evolution of Nassellaria and Spumellaria (Radiolaria)Miguel Méndez Sandín · 2019
- Eimeria spp. de coelho e galinha domésticos: desenvolvimento de ensaios moleculares e caracterização filogenética.Úrsula Castro de Oliveira · 2011
- The role of pollinators in generating and maintaining floral polymorphism : phylogeographic and behavioural aspectsDe Jager, Marinus Louis · 2013
- FRONTIERS IN PALAEONTOLOGY EARLY VERTEBRATE EVOLUTIONPhilip C. J. Donoghue, Joseph N. Keating · 2014
- Eimeria spp. de coelho e galinha domésticos: desenvolvimento de ensaios moleculares e caracterização filogenéticaSão Paulo, Arthur Gruber · 2011
- A Brief Review of Palaeobotanical Research in IcelandThomas Denk, Friđgeir Grímsson, Reinhard Zetter, Leifur A. Símonarson · 2011 · Topics in geobiology
- Modification of a Comparative Biogeographic Method Protocol to Differentiate Vicariance and DispersalBrian I. Crother, Lynne R. Parenti · 2016 · CRC Press eBooks
- Biogeography And Diversification In The Neotropics: Testing Macroevolutionary Hypotheses Using Molecular Phylogenetic DataDaza Rojas, Juan Manuel · 2010
- Systematics and Species Delimitation in New Guinea Skink Species Complexes (Squamata: Scincidae)Eric N. Rittmeyer · 2014
- Phylogenomics and PhylogeneticsRodney L. Honeycutt · 2018 · Elsevier eBooks
- Biogeochemical and phylogenetic signals of Proterozoic and Phanerozoic microbial metabolismsDanielle S. Gruen · 2018
- Bayesian phylogenetic estimation of fossil agesAlexei J. Drummond, Tanja Stadler · 2016 · arXiv (Cornell University)
- Estimating recent divergence history: making the most of microsatellite data and Approximate Bayesian Computation approachesTakeshi Kawakami, Concetta Burgarella · 2020 · Peer Community in Evolutionary Biology
- How Advances in Phylogenetic Methods Change Our Understanding of the Evolutionary Emergence of Land Plants (Embryophyta)Mark N. Puttick, Jennifer L. Morris, Tom A. Williams, Dianne Edwards, Paul Kenrick, Silvia Pressel, Charles H. Wellman, Harald Schneider, D. Pisani, Philip C. J. Donoghue · 2020 · Wiley eBooks
- Concepts, perspectives and implications of a hybrid system made of nucleic acids biopolymers and hydroxyapatite mineralPau Turón · 2019
- Regulation of Endogenous Interleukin-36 ActivityAli Jaafar · 2019 · White Rose eTheses Online (University of Leeds, The University of Sheffield, University of York)
- Integrating Fossil Preservation Biases in the Selection of Calibrations for Molecular Divergence Time EstimationA Lex D Ornburg, J Eremy, M. B Eaulieu, J Effrey, C. O Liver, T Homas J. N Ear, Todd H. Oakley · 2011
- The Trump Plan and the Utilization of the Differentiated Staff.I. Thomas Holleman · 1974
- Integrating, Developing, and Testing Methods to Generate More Cohesive Approaches to Biogeographic InferenceMallory E. Eckstut · 2020 · PubMed Central
- Comment on essd-2021-3942022 · Earth system science data
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- Peer Review #2 of "The Phanerozoic diversification of silica-cycling testate amoebae and its possible links to changes in terrestrial ecosystems (v0.1)"2015 · PeerJ
- Filosofia da ciência e evolução: uma contribuição ao ensino. Parte 3. Por que evolução?Francisco José De Figueiredo, Levy Aquino De Oliveira · 2020 · Revista Sustinere
- Molecular genetic insights into deuterostome evolution from the direct-developing hemichordateSaccoglossus kowalevskiiChristopher J. Lowe · 2009 · Oxford University Press eBooks
- PaleontologyDavid A. T. Harper · 2021 · Springer eBooks
- Peer Review #1 of "The Phanerozoic diversification of silica-cycling testate amoebae and its possible links to changes in terrestrial ecosystems (v0.1)"2015 · PeerJ
- Response to Referees’ commentsMin Zhu · 2022 · Earth system science data