The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
High-throughput sequencing SELEX for the determination of DNA-binding protein specificities in vitro
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Cites
Impact of cytosine methylation on DNA binding specificities of human transcription factors
Yin, Y., Morgunova, E., Jolma, A., Kaasinen, E., Sahu, B., Khund-Sayeed, S., Das, P. K., Kivioja, T., Dave, K., Zhong, F., et al. (2017) · Science · doi:10.1126/science.aaj2239 · Cited by 1,257
SALL4 controls cell fate in response to DNA base composition
Pantier, R., Chhatbar, K., Quante, T., Skourti-Stathaki, K., Cholewa-Waclaw, J., Alston, G., Alexander-Howden, B., Lee, H. Y., Cook, A. G., Spruijt, C. G., et al. (2021) · Molecular Cell · doi:10.1016/j.molcel.2020.11.046 · Cited by 45
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Research works printed but not linked: 12
- Ellington, 1990, In vitro selection of RNA molecules that bind specific ligands, Nature, 346, 818, 10.1038/346818a0 · DOI
- Gräslund, 2008, Protein production and purification, Nat. Methods, 5, 135, 10.1038/nmeth.f.202 · DOI
- Jolma, 2010, Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities, Genome Res., 20, 861, 10.1101/gr.100552.109 · DOI · Paper page
- Jolma, 2013, DNA-binding specificities of human transcription factors, Cell, 152, 327, 10.1016/j.cell.2012.12.009 · DOI
- Jolma, 2020, Binding specificities of human RNA-binding proteins toward structured and linear RNA sequences, Genome Res., 30, 962, 10.1101/gr.258848.119 · DOI
- Kanagawa, 2003, Bias and artifacts in multitemplate polymerase chain reactions (PCR), J. Biosci. Bioeng., 96, 317, 10.1016/S1389-1723(03)90130-7 · DOI
- Kielkopf, 2021, Expressing cloned genes for protein production, purification, and analysis, Cold Spring Harb. Protoc., 2021, 10.1101/pdb.top102129 · DOI
- Nitta, 2015, Conservation of transcription factor binding specificities across 600 million years of bilateria evolution, Elife, 4, e04837, 10.7554/eLife.04837 · DOI
- Roulet, 2002, High-throughput SELEX–SAGE method for quantitative modeling of transcription-factor binding sites, Nat. Biotechnol., 20, 831, 10.1038/nbt718 · DOI
- Slattery, 2011, Cofactor binding evokes latent differences in DNA binding specificity between Hox proteins, Cell, 147, 1270, 10.1016/j.cell.2011.10.053 · DOI
- Thompson, 2002, Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by ‘reconditioning PCR, Nucleic Acids Res., 30, 2083, 10.1093/nar/30.9.2083 · DOI
- Tuerk, 1990, Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase, Science, 249, 505, 10.1126/science.2200121 · DOI
Cited by
Sorted by citations
Structure of SALL4 zinc finger domain reveals link between AT-rich DNA binding and Okihiro syndrome
Watson, J. A., Pantier, R., Jayachandran, U., Chhatbar, K., Alexander-Howden, B., Kruusvee, V., Prendecki, M., Bird, A., & Cook, A. G. (2023) · Life Science Alliance · doi:10.26508/lsa.202201588 · Cited by 14
“All possible canonical k-mer sequences (k = 6) were searched individually in SELEX libraries at different cycles using eme_selex (Pantier et al, 2022).”
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Metadata
- Authors
- Pantier, R., Chhatbar, K., Alston, G., Lee, H. Y., & Bird, A.
- Venue
- STAR Protocols
- Publisher
- Elsevier BV
- Published
- 2022-09
- Volume
- 3
- Issue
- 3
- Pages
- 101490
- ISSN
- 2666-1667
- PMC
- PMC9243297
- Cited by
- 28
- References
- 2
- Language
- en
- Licence
- Funders
- ERC (EC 694295 Gen-Epix)
- European Research Council
- University of Edinburgh
- Simons Initiative for the Developing Brain
- Wellcome Trust (092076, 107930, 203149)
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