Detection of DNA methylation changes during somatic embryogenesis of Siberian ginseng (Eleuterococcus senticosus)
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In Siberian ginseng, 16.99% of 5'-CCGG-3' sites in the genome of non-embryogenic callus were cytosine methylated, while only 11.20% in embryogenic callus tissue.
“Using two different approaches (HPLC quantification of nucleosides and MSAP technique), the researchers investigated two calli of the same genotype, one that formed embryos and one that did not, raised from the same culture conditions, and identified that 16.99% of 5′-CCGG-3′ sites in the genome of the non-embryogenic callus were cytosine methylated, while only 11.20% in case of the embryogenic”
From Somaclonal Variation—Advantage or Disadvantage in Micropropagation of the Medicinal Plants (2023) · cites this paper as [115]
In Siberian ginseng, induction of somatic embryogenesis is associated with hypomethylation of DNA, while hypermethylation is associated with its repression.
“Contrariwise, Chakrabarty et al., (2003) [115] showed that, in Siberian ginseng, the induction of SE is associated with the hypomethylation of DNA, while hypermethylation is associated with the repression of it.”
From Somaclonal Variation—Advantage or Disadvantage in Micropropagation of the Medicinal Plants (2023) · cites this paper as Chakrabarty et al., (2003) [115]
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Nic-Can, G. I., López-Torres, A., Barredo-Pool, F., Wrobel, K., Loyola-Vargas, V. M., Rojas-Herrera, R., & De-la-Peña, C. (2013) · PLoS ONE · doi:10.1371/journal.pone.0072160 · Cited by 164 · see citing works
Somaclonal Variation—Advantage or Disadvantage in Micropropagation of the Medicinal Plants
Duta-Cornescu, G., Constantin, N., Pojoga, D.-M., Nicuta, D., & Simon-Gruita, A. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24010838 · Cited by 108 · see citing works
“, (2003) [115] showed that, in Siberian ginseng, the induction of SE is associated with the hypomethylation of DNA, while hypermethylation is associated with the repression of it.”
Background
- Authors
- Chakrabarty, D., Yu, K. W., & Paek, K. Y.
- Affiliations
- Chungbuk National University (KR)
- Corresponding author
- Paek, K.Y.
- Venue
- Plant Science
- Publisher
- Elsevier BV
- Published
- 2003-07
- Volume
- 165
- Issue
- 1
- Pages
- 61-68
- ISSN
- 0168-9452 (ISSN-L)
- OpenAlex
- W2033334895
- Cited by
- 136
- References
- 0
- Citations by year
- 2026: 2 · 2025: 1 · 2024: 6 · 2023: 3 · 2022: 9 · 2021: 5 · 2020: 6 · 2019: 11 · 2018: 7 · 2017: 4 · 2016: 7 · 2015: 9 · 2014: 9 · 2013: 6 · 2012: 11
- FWCI
- 1.04
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Plant Science (publishedVersion)
- Funders
- Chungbuk National University
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant tissue culture and regeneration
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Epigenetics and DNA Methylation
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
- Keywords
- DNA methylation, somatic embryogenesis, Siberian ginseng, embryogenic callus, non-embryogenic callus, 5-methyldeoxycytidine, 2,4-D, dark treatment, gene expression regulation, epigenetics
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