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Steered molecular dynamics and mechanical functions of proteins
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Citations
Cited by
Scalable molecular dynamics with NAMD
Phillips, J. C., Braun, R., Wang, W., Gumbart, J., Tajkhorshid, E., Villa, E., Chipot, C., Skeel, R. D., Kalé, L., & Schulten, K. (2005) · Journal of Computational Chemistry · doi:10.1002/jcc.20289 · Cited by 16,914
Self-citationWei, G., Xi, W., Nussinov, R., & Ma, B. (2016) · Chemical Reviews · doi:10.1021/acs.chemrev.5b00562 · Cited by 436
Muller, M. P., Jiang, T., Sun, C., Lihan, M., Pant, S., Mahinthichaichan, P., Trifan, A., & Tajkhorshid, E. (2019) · Chemical Reviews · doi:10.1021/acs.chemrev.8b00608 · Cited by 282
Revealing Atomic-Level Mechanisms of Protein Allostery with Molecular Dynamics Simulations
Hertig, S., Latorraca, N. R., & Dror, R. O. (2016) · PLOS Computational Biology · doi:10.1371/journal.pcbi.1004746 · Cited by 118
Quantum Computing for Molecular Biology**
Baiardi, A., Christandl, M., & Reiher, M. (2023) · ChemBioChem · doi:10.1002/cbic.202300120 · Cited by 93
A Two-State Model for the Dynamics of the Pyrophosphate Ion Release in Bacterial RNA Polymerase
Da, L.-T., Pardo Avila, F., Wang, D., & Huang, X. (2013) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1003020 · Cited by 54
Mechanistic insights into G-protein coupling with an agonist-bound G-protein-coupled receptor
Batebi, H., Pérez-Hernández, G., Rahman, S. N., Lan, B., Kamprad, A., Shi, M., Speck, D., Tiemann, J. K. S., Guixà-González, R., Reinhardt, F., et al. (2024) · Nature Structural & Molecular Biology · doi:10.1038/s41594-024-01334-2 · Cited by 38
Hazardous Shortcuts in Standard Binding Free Energy Calculations
Blazhynska, M., Goulard Coderc de Lacam, E., Chen, H., Roux, B., & Chipot, C. (2022) · The Journal of Physical Chemistry Letters · doi:10.1021/acs.jpclett.2c01490 · Cited by 27
Conditioned Protein Structure Prediction
(2024) · doi:10.1103/prxlife.2.043001 · Cited by 16
Curti, M., Maffeis, V., Teixeira Alves Duarte, L. G., Shareef, S., Hallado, L. X., Curutchet, C., & Romero, E. (2023) · Protein Science · doi:10.1002/pro.4579 · Cited by 10
Giorgino, T., Harvey, M. J., & de Fabritiis, G. (2010) · Computer Physics Communications · doi:10.1016/j.cpc.2010.04.007 · Cited by 8
Bera, P., & Mondal, J. (2025) · The Journal of Chemical Physics · doi:10.1063/5.0279756 · Cited by 7
Metadata
- Authors
- Isralewitz, B., Gao, M., & Schulten, K.
- Venue
- Current Opinion in Structural Biology
- Publisher
- Elsevier BV
- Published
- 2001-04
- Volume
- 11
- Issue
- 2
- Pages
- 224-230
- ISSN
- 0959-440X (ISSN-L)
- OpenAlex
- W2099598754
- Cited by
- 1,065
- References
- 0
- FWCI
- 2.73
- Type
- journal article
- Language
- en
- Open access
- closed
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
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Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.