ETS Protein–Dependent Accessibility Changes at the Immunoglobulin μ Heavy Chain Enhancer
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PU.1 has chromatin opening activity in B cells, can eject nucleosomes in macrophage lines, and causes rapid increases in ATAC accessibility at sites it occupies when introduced into Scid.adh.2C2 cells.
“This is consistent with PU.1's activity as a site-specific chromatin opening factor in B cells (96, 97), with the ability of PU.1 to eject nucleosomes from sites where it binds in macrophage lines (12), and with its ability to cause rapid increases in ATAC accessibility at the sites it occupies when introduced into Scid.adh.2C2 cells (85).”
From Mechanisms of Action of Hematopoietic Transcription Factor PU.1 in Initiation of T-Cell Development (2019) · cites this paper as [96]
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DeKoter, R. P., Walsh, J. C., & Singh, H. (1998) · The EMBO Journal · doi:10.1093/emboj/17.15.4456 · Cited by 296 · see citing works
Mayall, T. P., Sheridan, P. L., Montminy, M. R., & Jones, K. A. (1997) · Genes & Development · doi:10.1101/gad.11.7.887 · Cited by 118 · see citing works
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- [1]1. Angelin-Duclos, C ∙ Calame, K Evidence that immunoglobulin VH-DJ recombination does not require germ line transcription of the recombining variable gene segment Mol. Cell. Biol. 1998; 18:6253-6364 Crossref Scopus (68) PubMed Google Scholar
- [2]2. Bories, J.C ∙ Demengeot, J ∙ Davidson, L ... Gene-targeted deletion and replacement mutations of the T-cell receptor β-chain enhancerthe role of enhancer elements in controlling V(D)J recombination accessibility Proc. Natl. Acad. Sci. USA. 1996; 93:7871-7876 Crossref Scopus (140) PubMed Google Scholar
- [3]3. Bottaro, A ∙ Young, F ∙ Chen, J ... Deletion of the IgH intronic enhancer and associated matrix-attachment regions decreases, but does not abolish, class switching at the μ locus Int. Immunol. 1998; 10:799-806 Crossref Scopus (57) PubMed Google Scholar
- [4]4. Bouvier, G ∙ Watrin, F ∙ Naspetti, M ... Deletion of the mouse T-cell receptor β gene enhancer blocks αβ T cell development Proc. Natl. Acad. Sci. USA. 1996; 93:7877-7881 Crossref Scopus (160) PubMed Google Scholar
- [5]5. Boyes, J ∙ Felsenfeld, G Tissue-specific factors additively increase the probability of the all-or-none formation of a hypersensitive site EMBO J. 1996; 15:2496-2507 Crossref Scopus (147) PubMed Google Scholar
- [6]6. Capone, M ∙ Watrin, F ∙ Fernex, C ... TCRβ and TCRα gene enhancers confer tissue- and stage-specificity on V(D)J recombination events EMBO J. 1993; 12:4335-4346 Crossref Scopus (119) PubMed Google Scholar
- [7]7. Capone, M ∙ Curnow, J ∙ Bouvier, G ... T cell development in TCRαβ transgenic mice. Analysis using V(D)J recombination substrates J. Immunol. 1995; 154:5165-5172 PubMed Google Scholar
- [8]8. Chen, J ∙ Young, F ∙ Bottaro, A ... Mutations of the intronic IgH enhancer and its flanking sequences differentially affect accessibility of the JH locus EMBO J. 1993; 12:4635-4645 Crossref Scopus (172) PubMed Google Scholar
- [9]9. Clevers, H ∙ Ferrier, P Transcriptional control during T-cell development Curr. Opin. Immunol. 1998; 10:166-171 Crossref Scopus (31) PubMed Google Scholar
- [10]10. Dang, W ∙ Nikolajczyk, B.S ∙ Sen, R Exploring functional redundancy in the immunoglobulin μ heavy chain gene enhancer Mol. Cell. Biol. 1998; 18:6870-6878 Crossref Scopus (21) PubMed Google Scholar
- [12]12. Demengeot, J ∙ Oltz, E.M ∙ Alt, F.W Promotion of V(D)J recombinational accessibility by the intronic Eκ elementrole of the κ B motif Int. Immunol. 1995; 7:1995-2003 Crossref Scopus (27) PubMed Google Scholar
- [13]13. Dignam, J.D ∙ Lebovitz, R.M ∙ Roeder, R.G Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei Nucleic Acids Res. 1983; 11:1475-1489 Crossref Scopus (10351) PubMed Google Scholar
- [14]14. Ephrussi, A ∙ Church, G.M ∙ Tonegawa, S ... B lineage-specific interactions of an immunoglobulin enhancer with cellular factors in vivo Science. 1985; 227:134-140 Crossref Scopus (580) PubMed Google Scholar
- [15]15. Fernex, C ∙ Caillol, D ∙ Capone, M ... Sequences affecting the V(D)J recombinational activity of the IgH intronic enhancer in a transgenic substrate Nucleic Acids Res. 1994; 22:792-798 Crossref Scopus (18) PubMed Google Scholar
- [16]16. Ferrandini, L ∙ Gu, H ∙ De Smet, A ... Rearrangement-enhancing element upstream of the mouse immunoglobulin κ chain J cluster Science. 1996; 271:1416-1420 Crossref Scopus (65) PubMed Google Scholar
- [17]17. Forrester, W.C ∙ van Generen, C ∙ Jenuwein, T ... Dependence of enhancer-mediated transcription of the immunoglobulin μ gene on nuclear matrix attachment regions Science. 1994; 265:1221-1225 Crossref Scopus (214) PubMed Google Scholar
- [18]18. Giese, J ∙ Kingsley, C ∙ Kirshner, J.R ... Assembly and function of a TCRα enhancer complex is dependent on LEF-1-induced DNA bending and multiple protein-protein interactions Genes Dev. 1995; 9:995-1008 Crossref Scopus (491) PubMed Google Scholar
- [19]19. Hawley, R.G ∙ Lieu, F.H ∙ Fong, A.Z ... Versatile retroviral vectors for potential use in gene therapy Gene Therapy. 1994; 1:136-138 PubMed Google Scholar
- [20]20. Hernandez-Munain, C ∙ Roberts, J.L ∙ Krangel, M.S Cooperation among multiple transcription factors is required for access to minimal T-cell receptor alpha-enhancer chromatin in vivo Mol. Cell. Biol. 1998; 18:3223-3233 Crossref Scopus (56) PubMed Google Scholar
- [21]21. Hiramatsu, R ∙ Akagi, K ∙ Matsuoka, M ... The 3′ enhancer region determines the B/T specificity and pro-B/pre-B specificity of immunoglobulin Vκ-Jκ joining Cell. 1995; 83:1113-1123
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- Authors
- Nikolajczyk, B. S., Sanchez, J. A., & Sen, R.
- Affiliations
- Brandeis University (US)
- Corresponding author
- Sen, Ranjan
- Venue
- Immunity
- Publisher
- Elsevier BV
- Published
- 1999-07
- Volume
- 11
- Issue
- 1
- Pages
- 11-20
- ISSN
- 1074-7613 (ISSN-L)
- OpenAlex
- W2017606650
- Cited by
- 51
- References
- 2
- Citations by year
- 2025: 1 · 2024: 1 · 2021: 1 · 2020: 1 · 2019: 1 · 2017: 2 · 2014: 1 · 2012: 2
- FWCI
- 1.14
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Immunity (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institute of General Medical Sciences (GM-38925)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Immunology and Microbiology › Immunology › T-cell and B-cell Immunology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Keywords
- chromatin accessibility, ETS1, PU.1, V(D)J recombination, pro-T cells, IGH locus, transcriptional regulation
- MeSH terms
- Proto-Oncogene Protein Spi-1, Animals, Chromatin, DNA Restriction Enzymes, Enhancer Elements, Genetic, Gene Expression Regulation, Immunoglobulin Heavy Chains, Immunoglobulin mu-Chains, Protein Binding, Proto-Oncogene Proteins, Receptors, Antigen, B-Cell, Stem Cells, T-Lymphocytes, Transcription Factors, Transcription, Genetic, Xenopus, Gene Rearrangement, B-Lymphocyte, Heavy Chain, Trans-Activators, 3T3 Cells, Proto-Oncogene Proteins c-ets, Proto-Oncogene Protein c-ets-1, Mice
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