The microbiome as a potential biomarker for oesophageal adenocarcinoma
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Two types of microbiota have been identified in the esophagus: Type I, present in healthy subjects, is characterized by a predominance of Gram-positive taxa (especially Streptococcus), whereas type II, associated with ERD and Barrett esophagus (BE), is constituted by a predominance of Gram-negative taxa, including Veillonella, Prevotella, Haemophilus, Neisseria, Rothia, Granulicatella, Campylobact
“two types of microbiota have been identified in the esophagus: Type I, present in healthy subjects, is characterized by a predominance of Gram-positive taxa (especially Streptococcus), whereas type II, associated with ERD and Barrett esophagus (BE), is constituted by a predominance of Gram-negative taxa”
From Proton pump inhibitors and dysbiosis: current knowledge and aspects to be clarified (2019) · cites this paper as [36]
Cites
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
Salter, S. J., Cox, M. J., Turek, E. M., Calus, S. T., Cookson, W. O., Moffatt, M. F., Turner, P., Parkhill, J., Loman, N. J., & Walker, A. W. (2014) · BMC Biology · doi:10.1186/s12915-014-0087-z · Cited by 3,463 · see citing works
Bacterial biota in the human distal esophagus
Pei, Z., Bini, E. J., Yang, L., Zhou, M., Francois, F., & Blaser, M. J. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0306398101 · Cited by 501 · see citing works
Yang, L., Lü, X., Nossa, C. W., François, F., Peek, R. M., & Pei, Z. (2009) · Gastroenterology · doi:10.1053/j.gastro.2009.04.046 · Cited by 488 · see citing works
Quantitative Analysis of Diverse Lactobacillus Species Present in Advanced Dental Caries
Byun, R., Nadkarni, M. A., Chhour, K.-L., Martin, F. E., Jacques, N. A., & Hunter, N. (2004) · Journal of Clinical Microbiology · doi:10.1128/jcm.42.7.3128-3136.2004 · Cited by 382 · see citing works
Ross-Innes, C. S., Debiram–Beecham, I., O’Donovan, M., Walker, E. C., Varghese, S., Lao-Sirieix, P., Lovat, L. B., Griffin, S. M., Ragunath, K., Haidry, R. J., et al. (2015) · PLoS Medicine · doi:10.1371/journal.pmed.1001780 · Cited by 307 · see citing works
Blackett, K. L., Siddhi, S. S., Cleary, S., Steed, H., Miller, M. H., Macfarlane, S., Macfarlane, G. T., & Dillon, J. F. (2013) · Alimentary Pharmacology & Therapeutics · doi:10.1111/apt.12317 · Cited by 211 · see citing works
Bacterial Profile of Dentine Caries and the Impact of pH on Bacterial Population Diversity
Kianoush, N., Adler, C. J., Nguyen, K.-A. T., Browne, G. V., Simonian, M. R., & Hunter, N. (2014) · PLoS ONE · doi:10.1371/journal.pone.0092940 · Cited by 169 · see citing works
A non-endoscopic device to sample the oesophageal microbiota: a case-control study
Elliott, D. R. F., Walker, A. W., O’Donovan, M., Parkhill, J., & Fitzgerald, R. C. (2016) · The Lancet. Gastroenterology & hepatology · doi:10.1016/s2468-1253(16)30086-3 · Cited by 164 · see citing works
Gall, A., Fero, J., McCoy, C. O., Claywell, B. C., Sanchez, C. A., Blount, P. L., Li, X., Vaughan, T. L., Matsen, F. A., IV, Reid, B. J., et al. (2015) · PLoS ONE · doi:10.1371/journal.pone.0129055 · Cited by 126 · see citing works
Dating the Rise of Esophageal Adenocarcinoma: Analysis of Connecticut Tumor Registry Data, 1940–2007
Abrams, J. A., Sharaiha, R. Z., Gonsalves, L., Lightdale, C. J., & Neugut, A. I. (2011) · Cancer Epidemiology Biomarkers & Prevention · doi:10.1158/1055-9965.epi-10-0802 · Cited by 77 · see citing works
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Proton pump inhibitors and dysbiosis: current knowledge and aspects to be clarified
Bruno, G., Zaccari, P., Rocco, G., Scalese, G., Panetta, C., Porowska, B., Pontone, S., & Severi, C. (2019) · World Journal of Gastroenterology · doi:10.3748/wjg.v25.i22.2706 · Cited by 258 · see citing works
The Esophageal Microbiome in Health and Disease
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Jameel, M., & Kwok, H. F. (2021) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2021.06.011 · Cited by 20 · see citing works
Falk, G. W. (2018) · The American Journal of Gastroenterology · doi:10.1038/s41395-018-0374-3 · Cited by 4 · see citing works
Prior tonsillectomy is associated with an increased risk of esophageal adenocarcinoma
Garman, K. S., Ajayi, T. A., Boutte, H. J., Chiu, S., von Furstenberg, R. J., Lloyd, B. R., Zhang, C., Onaitis, M. W., Chow, S., & McCall, S. J. (2020) · PLoS ONE · doi:10.1371/journal.pone.0235906 · Cited by 3 · see citing works
kaihao, D., Lizhao, H., Liu, C., Pandeng, Z., Li, Y., Zhangtuo, X., Zhanjin, W., & Zhan, W. (2024) · Research Square · doi:10.21203/rs.3.rs-3991663/v1
Rao, M. V., Messina, J. A., & Surana, N. K. (2023) · ClinMicroNow · doi:10.1002/9781683670438.mcm0017
- Authors
- Abrams, J. A.
- Affiliations
- Columbia University Irving Medical Center (US)
- Corresponding author
- Abrams, Julian A
- ORCID
- Abrams, Julian A
- Venue
- The Lancet Gastroenterology & Hepatology
- Publisher
- Elsevier BV
- Published
- 2017-01
- Volume
- 2
- Issue
- 1
- Pages
- 4-6
- ISSN
- 2468-1156 (ISSN-L)
- 2468-1253
- OpenAlex
- W2551405428
- Cited by
- 7
- References
- 10
- Citations by year
- 2024: 1 · 2023: 1 · 2021: 1 · 2020: 1 · 2019: 1 · 2018: 2
- FWCI
- 1.11
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- The Lancet. Gastroenterology & hepatology (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Health Sciences › Medicine › Surgery › Esophageal Cancer Research and Treatment
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Medicine › Surgery › Helicobacter pylori-related gastroenterology studies
- Keywords
- esophageal adenocarcinoma, gut microbiota, biomarkers, Barrett's esophagus, Helicobacter pylori, Cytosponge, high-grade dysplasia, Fusobacterium, Bacteroides, Veillonella, Streptococcus, reflux, genomic instability
- MeSH terms
- Adenocarcinoma, Esophageal Neoplasms, Humans, Biomarkers, Microbiota
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
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