Cited by 20Redox biology and oxidative stressAdvanced Proteomics Techniques and ApplicationsUbiquitin and proteasome pathways

Integrated Dissection of Cysteine Oxidative Post-translational Modification Proteome During Cardiac Hypertrophy

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Wang, Jie, Choi, Howard, Chung, Neo C., Cao, Quan, Ng, Dominic C. M., Mirza, Bilal, Scruggs, Sarah B., Wang, Ding +2 more·2018·Journal of Proteome Research

Abstract

Cysteine oxidative modification of cellular proteins is crucial for many aspects of cardiac hypertrophy development. However, integrated dissection of multiple types of cysteine oxidative post-translational modifications (O-PTM) of proteomes in cardiac hypertrophy is currently missing. Here we developed a novel discovery platform that encompasses a customized biotin switch-based quantitative proteomics pipeline and an advanced analytic workflow to comprehensively profile the landscape of cysteine O-PTM in an ISO-induced cardiac hypertrophy mouse model. Specifically, we identified a total of 1655 proteins containing 3324 oxidized cysteine sites by at least one of the following three modifications: reversible cysteine O-PTM, cysteine sulfinylation (CysSO 2 H), and cysteine sulfonylation (CysSO 3 H). Analyzing the hypertrophy signatures that are reproducibly discovered from this computational workflow unveiled four biological processes with increased cysteine O-PTM. Among them, protein phosphorylation, creatine metabolism, and response to elevated Ca 2+ pathways exhibited an elevation of cysteine O-PTM in early stages, whereas glucose metabolism enzymes were increasingly modified in later stages, illustrating a temporal regulatory map in cardiac hypertrophy. Our cysteine O-PTM platform depicts a dynamic and integrated landscape of the cysteine oxidative proteome, through the extracted molecular signatures, and provides critical mechanistic insights in cardiac hypertrophy. Data are available via ProteomeXchange with identifier PXD010336.

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Crossref · 10.1021/acs.jproteome.8b00372

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  • Identification of proteoforms (genetic variations, alternatively spliced products, phosphorylation, glycosylation, oxidative and other post-translational modifications) allows cardiovascular disease sub-classification.

    “Now, identification of proteoforms (e.g., genetic variations, alternatively spliced products, phosphorylation118, glycosylation119, oxidative120 and other PTMs121) allow CVD sub-classification.”

    From A high-stringency blueprint of the human proteome (2020) · cites this paper as [120]

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Authors
Wang, J., Choi, H., Chung, N. C., Cao, Q., Ng, D. C. M., Mirza, B., Scruggs, S. B., Wang, D., Garlid, A. O., & Ping, P.
Affiliations
University of California, Los Angeles (US)
Corresponding author
Ping, Peipei
Venue
Journal of Proteome Research
Published
2018-08-24
Volume
17
Issue
12
Pages
4243-4257
ISSN
  • 1535-3893 (ISSN-L)
  • 1535-3907
OpenAlex
W2888623115
Cited by
20
References
70
Citations by year
2025: 2 · 2024: 1 · 2023: 1 · 2022: 2 · 2021: 5 · 2020: 2 · 2019: 6 · 2018: 1
FWCI
1.24
Type
journal article
Language
en
Open access
Locations
  • Journal of Proteome Research (publishedVersion)
  • PubMed (publishedVersion)
  • PubMed Central (acceptedVersion)
  • eScholarship (California Digital Library) (submittedVersion)
Funders
  • National Heart, Lung, and Blood Institute (R35-HL135772)
  • National Institute of General Medical Sciences (U54-GM114833)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Redox biology and oxidative stress
  • Physical Sciences › Chemistry › Spectroscopy › Advanced Proteomics Techniques and Applications
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ubiquitin and proteasome pathways
Keywords
cardiac hypertrophy, protein phosphorylation, creatine metabolism, calcium signaling, glucose metabolism
MeSH terms
Calcium, Creatine, Cysteine, Glucose, Cardiomegaly, Humans, Oxidation-Reduction, Phosphorylation, Protein Processing, Post-Translational, Time Factors, Proteome

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